Experiment: cholesterol 100uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0758 and Rv0759c overlap by 29 nucleotides Rv0759c and Rv0760c are separated by 109 nucleotides Rv0760c and Rv0761c are separated by 12 nucleotides
Rv0758: Rv0758 - Possible two component system response sensor kinase membrane associated PhoR, at 852,396 to 853,853
Rv0758
Rv0759c: Rv0759c - Conserved hypothetical protein, at 853,825 to 854,157
Rv0759c
Rv0760c: Rv0760c - Conserved protein, at 854,267 to 854,686
Rv0760c
Rv0761c: Rv0761c - Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB, at 854,699 to 855,826
Rv0761c
Position (kb) 854
855 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 853.651 kb on - strand, within Rv0758 at 854.237 kb on + strand at 854.237 kb on + strand at 854.238 kb on - strand at 854.238 kb on - strand at 854.238 kb on - strand at 854.238 kb on - strand at 854.518 kb on + strand, within Rv0760c at 854.518 kb on + strand, within Rv0760c at 854.519 kb on - strand, within Rv0760c at 854.790 kb on + strand at 854.791 kb on - strand at 854.835 kb on + strand, within Rv0761c at 854.835 kb on + strand, within Rv0761c at 854.836 kb on - strand, within Rv0761c at 854.836 kb on - strand, within Rv0761c at 855.009 kb on + strand, within Rv0761c at 855.009 kb on + strand, within Rv0761c at 855.009 kb on + strand, within Rv0761c at 855.189 kb on + strand, within Rv0761c at 855.396 kb on + strand, within Rv0761c at 855.396 kb on + strand, within Rv0761c at 855.397 kb on - strand, within Rv0761c
Per-strain Table
Position Strand Gene LocusTag Fraction cholesterol 100uM (C) remove 853,651 - Rv0758 0.86 +0.4 854,237 + -0.3 854,237 + -0.8 854,238 - -1.3 854,238 - -2.0 854,238 - -0.1 854,238 - +0.1 854,518 + Rv0760c 0.60 -1.3 854,518 + Rv0760c 0.60 -1.5 854,519 - Rv0760c 0.60 -0.4 854,790 + -1.5 854,791 - -2.4 854,835 + Rv0761c 0.12 +0.6 854,835 + Rv0761c 0.12 -2.9 854,836 - Rv0761c 0.12 -3.3 854,836 - Rv0761c 0.12 -2.5 855,009 + Rv0761c 0.27 +1.9 855,009 + Rv0761c 0.27 -1.6 855,009 + Rv0761c 0.27 -0.1 855,189 + Rv0761c 0.43 -2.2 855,396 + Rv0761c 0.62 -2.6 855,396 + Rv0761c 0.62 -1.3 855,397 - Rv0761c 0.62 -1.7
Or see this region's nucleotide sequence