Experiment: Urea 10mM (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3655c and Rv3656c are separated by 23 nucleotides Rv3656c and Rv3657c are separated by 9 nucleotides Rv3657c and Rv3658c are separated by 23 nucleotides Rv3658c and Rv3659c overlap by 4 nucleotides
Rv3655c: Rv3655c - Conserved hypothetical protein, at 4,094,923 to 4,095,300
Rv3655c
Rv3656c: Rv3656c - Conserved hypothetical protein, at 4,095,324 to 4,095,530
Rv3656c
Rv3657c: Rv3657c - Possible conserved alanine rich membrane protein, at 4,095,540 to 4,096,115
Rv3657c
Rv3658c: Rv3658c - Probable conserved transmembrane protein, at 4,096,139 to 4,096,939
Rv3658c
Rv3659c: Rv3659c - Conserved hypothetical protein, at 4,096,936 to 4,097,994
Rv3659c
Position (kb) 4096
4097 Strain fitness (log2 ratio) -1
0
1 at 4095.164 kb on - strand, within Rv3655c at 4095.164 kb on - strand, within Rv3655c at 4095.210 kb on + strand, within Rv3655c at 4095.211 kb on - strand, within Rv3655c at 4095.445 kb on + strand, within Rv3656c at 4095.531 kb on - strand at 4095.583 kb on - strand at 4095.777 kb on + strand, within Rv3657c at 4096.023 kb on + strand, within Rv3657c at 4096.310 kb on + strand, within Rv3658c at 4096.711 kb on - strand, within Rv3658c at 4096.930 kb on + strand at 4097.215 kb on + strand, within Rv3659c at 4097.216 kb on - strand, within Rv3659c at 4097.216 kb on - strand, within Rv3659c at 4097.216 kb on - strand, within Rv3659c at 4097.722 kb on + strand, within Rv3659c at 4097.722 kb on + strand, within Rv3659c
Per-strain Table
Position Strand Gene LocusTag Fraction Urea 10mM (N) remove 4,095,164 - Rv3655c 0.64 -1.0 4,095,164 - Rv3655c 0.64 +0.4 4,095,210 + Rv3655c 0.76 +0.4 4,095,211 - Rv3655c 0.76 -1.5 4,095,445 + Rv3656c 0.58 -1.0 4,095,531 - -0.4 4,095,583 - -0.1 4,095,777 + Rv3657c 0.41 -1.1 4,096,023 + Rv3657c 0.84 -0.1 4,096,310 + Rv3658c 0.21 -1.4 4,096,711 - Rv3658c 0.71 +0.4 4,096,930 + -0.6 4,097,215 + Rv3659c 0.26 -0.4 4,097,216 - Rv3659c 0.26 -0.3 4,097,216 - Rv3659c 0.26 +0.9 4,097,216 - Rv3659c 0.26 +1.0 4,097,722 + Rv3659c 0.74 -0.8 4,097,722 + Rv3659c 0.74 -1.0
Or see this region's nucleotide sequence