Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3411c

Experiment: 7H9 with Pyrazinamide 50 ug/mL; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Pyrazinamide 50 ug/mL; pH 5.5
3,829,941	-				-0.1
3,831,574	+				+1.7
3,831,714	+				-0.3
3,831,715	-				-2.4
3,831,719	+				+0.9
3,831,719	+				-0.8
3,831,720	-				+1.7
3,831,919	+		Rv3412	0.47	-0.2
3,831,919	+		Rv3412	0.47	-0.8
3,831,951	+		Rv3412	0.55	-1.6
3,831,952	-		Rv3412	0.55	-0.3
3,831,952	-		Rv3412	0.55	+1.7
3,831,995	+		Rv3412	0.65	+0.4
3,831,996	-		Rv3412	0.66	+0.6
3,832,051	-		Rv3412	0.79	+0.1
3,832,484	+		Rv3413c	0.38	+1.1
3,832,485	-		Rv3413c	0.38	+0.3