Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2732c
Experiment: 7H9 with Pyrazinamide 50 ug/mL; pH 5.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Pyrazinamide 50 ug/mL; pH 5.5 |
|---|---|---|---|---|---|
| remove | |||||
| 3,043,541 | + | Rv2731 | 0.38 | -0.6 | |
| 3,043,541 | + | Rv2731 | 0.38 | -2.6 | |
| 3,043,647 | - | Rv2731 | 0.46 | -1.2 | |
| 3,043,689 | + | Rv2731 | 0.49 | -0.9 | |
| 3,043,689 | + | Rv2731 | 0.49 | -0.8 | |
| 3,043,689 | + | Rv2731 | 0.49 | -0.9 | |
| 3,043,706 | + | Rv2731 | 0.50 | +1.7 | |
| 3,044,621 | + | Rv2732c | 0.40 | -1.2 | |
| 3,045,544 | - | Rv2733c | 0.36 | +1.7 | |
| 3,045,949 | - | Rv2733c | 0.63 | +2.1 |
Or see this region's nucleotide sequence