Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2535c

Experiment: 7H9 with Pyrazinamide 50 ug/mL; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Pyrazinamide 50 ug/mL; pH 5.5
2,860,324	+				-1.1
2,860,432	-				+0.4
2,860,457	+				-0.6
2,860,458	-				-1.0
2,860,570	+		Rv2536	0.17	+0.1
2,860,571	-		Rv2536	0.17	-1.2
2,860,571	-		Rv2536	0.17	-1.8
2,860,571	-		Rv2536	0.17	-0.3
2,860,571	-		Rv2536	0.17	-0.4
2,860,755	+		Rv2536	0.44	-0.2
2,860,755	+		Rv2536	0.44	+0.1
2,860,936	+		Rv2536	0.70	+0.6
2,860,937	-		Rv2536	0.70	-1.5
2,861,069	+		Rv2536	0.89	-0.1
2,861,085	-				-0.6
2,861,142	+				+0.3