Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2502c

Experiment: 7H9 with Pyrazinamide 50 ug/mL; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Pyrazinamide 50 ug/mL; pH 5.5
2,816,078	+		Rv2501c	0.59	+0.2
2,816,079	-		Rv2501c	0.59	+0.4
2,816,166	+		Rv2501c	0.64	+0.2
2,816,372	-		Rv2501c	0.74	+0.4
2,816,809	+				-0.1
2,816,867	-				+0.7
2,817,229	-		Rv2502c	0.22	-1.5
2,817,229	-		Rv2502c	0.22	-0.2
2,817,913	-		Rv2502c	0.65	-1.5
2,818,071	+		Rv2502c	0.75	-0.5
2,818,087	+		Rv2502c	0.76	-0.0
2,818,143	+		Rv2502c	0.79	-1.0
2,818,144	-		Rv2502c	0.79	+0.7
2,818,144	-		Rv2502c	0.79	-1.0
2,818,248	+		Rv2502c	0.86	-0.7
2,818,400	-				-1.3
2,818,400	-				-2.0
2,818,451	+				+0.1
2,818,523	-				+0.1
2,818,655	-		Rv2503c	0.28	+0.4
2,818,781	-		Rv2503c	0.47	+0.3
2,819,057	+		Rv2503c	0.89	-1.6
2,819,058	-		Rv2503c	0.89	-1.2
2,819,208	+		Rv2504c	0.11	-0.6
2,819,318	-		Rv2504c	0.26	-1.3
2,819,395	+		Rv2504c	0.36	-0.8
2,819,396	-		Rv2504c	0.36	-0.6