Experiment: 7H9 with Pyrazinamide 50 ug/mL; pH 5.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0890c and Rv0891c are separated by 1 nucleotides Rv0891c and Rv0892 are separated by 397 nucleotides
Rv0890c: Rv0890c - Probable transcriptional regulatory protein (probably LuxR-family), at 989,948 to 992,596
Rv0890c
Rv0891c: Rv0891c - Possible transcriptional regulatory protein, at 992,598 to 993,455
Rv0891c
Rv0892: Rv0892 - Probable monooxygenase, at 993,853 to 995,340
Rv0892
Position (kb) 992
993
994 Strain fitness (log2 ratio) -2
-1
0
1
2 at 991.635 kb on + strand, within Rv0890c at 991.636 kb on - strand, within Rv0890c at 991.636 kb on - strand, within Rv0890c at 991.636 kb on - strand, within Rv0890c at 991.638 kb on + strand, within Rv0890c at 991.639 kb on - strand, within Rv0890c at 992.082 kb on - strand, within Rv0890c at 992.205 kb on - strand, within Rv0890c at 992.255 kb on + strand, within Rv0890c at 992.285 kb on + strand, within Rv0890c at 992.285 kb on + strand, within Rv0890c at 992.605 kb on - strand at 992.605 kb on - strand at 992.605 kb on - strand at 992.916 kb on + strand, within Rv0891c at 992.917 kb on - strand, within Rv0891c at 992.937 kb on + strand, within Rv0891c at 992.938 kb on - strand, within Rv0891c at 992.938 kb on - strand, within Rv0891c at 992.939 kb on + strand, within Rv0891c at 992.940 kb on - strand, within Rv0891c at 992.940 kb on - strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 993.029 kb on + strand, within Rv0891c at 993.029 kb on + strand, within Rv0891c at 993.030 kb on - strand, within Rv0891c at 993.216 kb on + strand, within Rv0891c at 993.341 kb on + strand, within Rv0891c at 993.342 kb on - strand, within Rv0891c at 993.434 kb on + strand at 993.477 kb on - strand at 993.526 kb on + strand at 993.527 kb on - strand at 993.748 kb on + strand at 993.751 kb on - strand at 994.263 kb on - strand, within Rv0892
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Pyrazinamide 50 ug/mL; pH 5.5 remove 991,635 + Rv0890c 0.64 -1.6 991,636 - Rv0890c 0.64 -1.2 991,636 - Rv0890c 0.64 -0.8 991,636 - Rv0890c 0.64 -1.4 991,638 + Rv0890c 0.64 +0.1 991,639 - Rv0890c 0.64 -0.3 992,082 - Rv0890c 0.81 -0.3 992,205 - Rv0890c 0.85 -0.9 992,255 + Rv0890c 0.87 -0.7 992,285 + Rv0890c 0.88 -0.5 992,285 + Rv0890c 0.88 +0.1 992,605 - -1.2 992,605 - -0.0 992,605 - +1.7 992,916 + Rv0891c 0.37 -0.4 992,917 - Rv0891c 0.37 -0.8 992,937 + Rv0891c 0.40 +0.4 992,938 - Rv0891c 0.40 -1.7 992,938 - Rv0891c 0.40 +0.8 992,939 + Rv0891c 0.40 -0.1 992,940 - Rv0891c 0.40 -0.3 992,940 - Rv0891c 0.40 +0.1 992,943 + Rv0891c 0.40 -0.7 992,943 + Rv0891c 0.40 +0.8 992,943 + Rv0891c 0.40 -0.5 993,029 + Rv0891c 0.50 -0.9 993,029 + Rv0891c 0.50 -1.9 993,030 - Rv0891c 0.50 -1.6 993,216 + Rv0891c 0.72 -0.6 993,341 + Rv0891c 0.87 +1.8 993,342 - Rv0891c 0.87 -0.6 993,434 + -2.4 993,477 - -1.5 993,526 + +0.1 993,527 - +0.8 993,748 + +0.7 993,751 - +0.5 994,263 - Rv0892 0.28 -0.0
Or see this region's nucleotide sequence