Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3791

Experiment: 7H9 with Cumene hydroperoxide 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRv3790 and Rv3791 are separated by 0 nucleotidesRv3791 and Rv3792 are separated by 2 nucleotides Rv3790: Rv3790 - Decaprenylphosphoryl-beta-D-ribose 2'-oxidase, at 4,235,779 to 4,237,164 Rv3790 Rv3791: Rv3791 - Decaprenylphosphoryl-D-2-keto erythro pentose reductase, at 4,237,165 to 4,237,929 Rv3791 Rv3792: Rv3792 - Arabinofuranosyltransferase AftA, at 4,237,932 to 4,239,863 Rv3792 Position (kb) 4237 4238Strain fitness (log2 ratio) -1 0 1at 4237.162 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 7H9 with Cumene hydroperoxide 0.05 mM
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4,237,162 + -0.6

Or see this region's nucleotide sequence