Experiment: 7H9 with Cumene hydroperoxide 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0628c and Rv0629c are separated by 92 nucleotides Rv0629c and Rv0630c overlap by 4 nucleotides
Rv0628c: Rv0628c - Conserved hypothetical protein, at 718,761 to 719,912
Rv0628c
Rv0629c: Rv0629c - Probable exonuclease V (alpha chain) RecD (exodeoxyribonuclease V alpha chain) (exodeoxyribonuclease V polypeptide), at 720,005 to 721,732
Rv0629c
Rv0630c: Rv0630c - Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease), at 721,729 to 725,013
Rv0630c
Position (kb) 720
721
722 Strain fitness (log2 ratio) -1
0
1 at 719.305 kb on + strand, within Rv0628c at 719.305 kb on + strand, within Rv0628c at 719.305 kb on + strand, within Rv0628c at 719.306 kb on - strand, within Rv0628c at 719.306 kb on - strand, within Rv0628c at 719.306 kb on - strand, within Rv0628c at 719.522 kb on - strand, within Rv0628c at 719.948 kb on - strand at 720.354 kb on + strand, within Rv0629c at 720.355 kb on - strand, within Rv0629c at 720.376 kb on - strand, within Rv0629c at 721.713 kb on + strand at 721.868 kb on + strand at 722.045 kb on + strand at 722.160 kb on - strand, within Rv0630c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Cumene hydroperoxide 0.05 mM remove 719,305 + Rv0628c 0.47 -1.3 719,305 + Rv0628c 0.47 -0.3 719,305 + Rv0628c 0.47 -0.3 719,306 - Rv0628c 0.47 -0.3 719,306 - Rv0628c 0.47 +0.6 719,306 - Rv0628c 0.47 +1.1 719,522 - Rv0628c 0.66 -0.7 719,948 - -0.0 720,354 + Rv0629c 0.20 -0.4 720,355 - Rv0629c 0.20 +1.2 720,376 - Rv0629c 0.21 -0.8 721,713 + +0.3 721,868 + +0.2 722,045 + +0.0 722,160 - Rv0630c 0.13 -0.5
Or see this region's nucleotide sequence