Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3331

Experiment: 7H9 with Sutezolid 0.12 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Sutezolid 0.12 ug/mL
3,716,263	+		Rv3330	0.40	+0.1
3,716,263	+		Rv3330	0.40	+0.5
3,716,264	-		Rv3330	0.40	+0.3
3,716,264	-		Rv3330	0.40	-0.3
3,716,264	-		Rv3330	0.40	+0.1
3,716,264	-		Rv3330	0.40	-0.3
3,716,264	-		Rv3330	0.40	-0.3
3,716,458	+		Rv3330	0.56	+0.5
3,716,458	+		Rv3330	0.56	+0.3
3,716,594	-		Rv3330	0.67	+0.7
3,716,594	-		Rv3330	0.67	+1.0
3,716,600	-		Rv3330	0.68	+1.7
3,716,630	-		Rv3330	0.70	-0.0
3,716,631	+		Rv3330	0.70	-0.1
3,716,632	-		Rv3330	0.70	+0.4
3,716,632	-		Rv3330	0.70	+0.4
3,716,759	-		Rv3330	0.81	+0.4
3,716,992	+				-0.4
3,716,993	-				+0.3
3,716,993	-				+0.1
3,717,000	+				-0.1
3,717,288	+		Rv3331	0.13	-0.9
3,717,582	+		Rv3331	0.33	-0.0
3,717,582	+		Rv3331	0.33	+0.4
3,717,583	-		Rv3331	0.33	+0.7
3,717,681	+		Rv3331	0.39	+0.3
3,718,008	+		Rv3331	0.61	+2.4
3,718,008	+		Rv3331	0.61	+1.1
3,718,009	-		Rv3331	0.61	+0.5
3,718,308	+		Rv3331	0.81	+1.5
3,718,759	+		Rv3332	0.14	+0.0
3,718,855	+		Rv3332	0.23	-0.1