Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2823c

Experiment: 7H9 with Sutezolid 0.12 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Sutezolid 0.12 ug/mL
3,128,684	-		Rv2821c	0.61	+0.0
3,128,744	-		Rv2821c	0.69	+1.0
3,128,957	+				-0.1
3,128,996	-				-0.2
3,129,004	+				-0.0
3,129,004	+				+0.8
3,129,005	-				-1.3
3,129,025	+		Rv2822c	0.14	-2.1
3,129,063	+		Rv2822c	0.24	+0.9
3,129,081	+		Rv2822c	0.29	+0.3
3,129,081	+		Rv2822c	0.29	-0.5
3,129,111	-		Rv2822c	0.37	+0.1
3,129,111	-		Rv2822c	0.37	-0.4
3,129,137	-		Rv2822c	0.44	-0.2
3,129,137	-		Rv2822c	0.44	+0.7
3,129,243	+		Rv2822c	0.72	-0.7
3,129,244	-		Rv2822c	0.72	-0.2
3,129,325	+				-0.3
3,129,326	-				-0.3
3,129,378	+				+0.1
3,129,378	+				+1.1
3,129,379	-				+0.1
3,129,484	+				-0.6
3,129,504	+				-0.9
3,129,505	-				-0.1
3,129,505	-				+0.0
3,129,599	+		Rv2823c	0.10	-0.1
3,129,621	+		Rv2823c	0.11	+0.0
3,129,765	+		Rv2823c	0.17	-0.3
3,129,765	+		Rv2823c	0.17	+0.0
3,129,981	+		Rv2823c	0.26	-1.5
3,129,982	-		Rv2823c	0.26	-0.7
3,130,158	+		Rv2823c	0.33	+0.6
3,130,159	-		Rv2823c	0.34	+1.0
3,130,185	+		Rv2823c	0.35	+1.1
3,130,361	+		Rv2823c	0.42	+0.4
3,130,361	+		Rv2823c	0.42	+1.3
3,130,591	-		Rv2823c	0.51	+0.1
3,130,816	-		Rv2823c	0.61	-0.4
3,130,853	+		Rv2823c	0.62	+0.7
3,130,890	+		Rv2823c	0.64	-0.4
3,131,061	-		Rv2823c	0.71	+1.4
3,131,061	-		Rv2823c	0.71	-0.1
3,131,061	-		Rv2823c	0.71	-0.4
3,131,202	+		Rv2823c	0.76	-0.0
3,131,239	+		Rv2823c	0.78	+0.2
3,131,262	+		Rv2823c	0.79	-0.2
3,131,303	-		Rv2823c	0.81	+0.4
3,131,303	-		Rv2823c	0.81	+0.5
3,131,846	-				-0.5
3,131,891	+		Rv2824c	0.13	-0.1
3,131,891	+		Rv2824c	0.13	-0.1
3,132,071	+		Rv2824c	0.32	+0.7
3,132,122	+		Rv2824c	0.37	-0.2
3,132,306	+		Rv2824c	0.57	-1.5
3,132,306	+		Rv2824c	0.57	-0.5
3,132,307	-		Rv2824c	0.57	-0.4
3,132,389	+		Rv2824c	0.66	-0.1
3,132,390	-		Rv2824c	0.66	+0.2
3,132,398	+		Rv2824c	0.66	-2.0
3,132,524	-		Rv2824c	0.80	-0.3
3,132,743	+				-2.3