Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2922A

Experiment: 7H9 with Amikacin di2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Amikacin di2 ug/mL
3,236,900	+		Rv2922c	0.75	-0.2
3,237,561	-				-0.6
3,238,256	-		Rv2923c	0.41	-0.7
3,238,399	-		Rv2923c	0.76	-2.0
3,238,603	-				+0.8
3,238,636	-				-1.3
3,238,655	-				+1.8
3,238,670	+				-0.3
3,238,670	+				+0.4
3,238,764	+		Rv2924c	0.19	-0.2
3,238,765	-		Rv2924c	0.19	-0.3
3,238,765	-		Rv2924c	0.19	+0.1
3,238,857	-		Rv2924c	0.29	-0.4
3,238,857	-		Rv2924c	0.29	+0.0
3,238,857	-		Rv2924c	0.29	+1.8
3,238,914	+		Rv2924c	0.36	-0.1
3,238,915	-		Rv2924c	0.36	+3.2