Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2568c

Experiment: 7H9 with Amikacin di2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Amikacin di2 ug/mL
2,891,614	-		Rv2567	0.69	-3.7
2,891,952	-		Rv2567	0.81	+0.4
2,891,983	+		Rv2567	0.82	-0.4
2,892,069	-		Rv2567	0.86	-0.9
2,892,088	+		Rv2567	0.86	-0.1
2,892,088	+		Rv2567	0.86	-0.2
2,892,557	+		Rv2568c	0.11	-0.0
2,892,558	-		Rv2568c	0.11	-0.2
2,892,632	-		Rv2568c	0.18	+1.9
2,892,897	+		Rv2568c	0.44	+1.9
2,892,930	+		Rv2568c	0.47	+0.6
2,892,930	+		Rv2568c	0.47	+2.5
2,892,931	-		Rv2568c	0.47	+3.5
2,892,931	-		Rv2568c	0.47	+0.9
2,893,600	+		Rv2569c	0.14	-1.7
2,893,601	-		Rv2569c	0.14	-1.3
2,893,763	-		Rv2569c	0.32	+2.9
2,893,763	-		Rv2569c	0.32	-0.7
2,893,825	-		Rv2569c	0.38	-1.5
2,893,904	-		Rv2569c	0.47	+0.1
2,893,930	-		Rv2569c	0.49	-0.3
2,893,930	-		Rv2569c	0.49	-1.1
2,893,930	-		Rv2569c	0.49	+1.9
2,893,930	-		Rv2569c	0.49	-0.4
2,894,096	-		Rv2569c	0.67	+1.9
2,894,096	-		Rv2569c	0.67	-1.6
2,894,096	-		Rv2569c	0.67	-1.5
2,894,180	-		Rv2569c	0.76	+0.1
2,894,306	-		Rv2569c	0.89	-2.8
2,894,415	-				-0.1