Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1256c

Experiment: 7H9 with Amikacin di2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Amikacin di2 ug/mL
1,402,702	+				-0.7
1,402,964	+		Rv1255c	0.31	-0.4
1,403,051	-		Rv1255c	0.45	-1.8
1,403,194	-		Rv1255c	0.68	+1.0
1,403,306	-		Rv1255c	0.87	-1.0
1,403,429	+				-0.4
1,403,905	+		Rv1256c	0.43	+0.7
1,404,141	-		Rv1256c	0.62	+0.2
1,404,176	-		Rv1256c	0.65	+0.3
1,404,464	+		Rv1256c	0.89	+1.9
1,404,464	+		Rv1256c	0.89	+0.3
1,404,467	+		Rv1256c	0.89	-0.1
1,404,468	-		Rv1256c	0.89	-0.4
1,404,474	-		Rv1256c	0.89	+1.1
1,404,805	+				-0.5
1,404,944	-		Rv1257c	0.17	-0.3
1,405,596	+		Rv1257c	0.64	+0.3
1,405,596	+		Rv1257c	0.64	-0.5
1,405,597	-		Rv1257c	0.64	-0.5
1,405,597	-		Rv1257c	0.64	-1.0
1,405,601	-		Rv1257c	0.65	-0.2