Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02463

Experiment: TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02462 and MPMX20_02463 are separated by 14 nucleotidesMPMX20_02463 and MPMX20_02464 are separated by 16 nucleotides MPMX20_02462: MPMX20_02462 - Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, at 2,603,326 to 2,604,381 _02462 MPMX20_02463: MPMX20_02463 - 5-keto-L-gluconate epimerase, at 2,604,396 to 2,605,184 _02463 MPMX20_02464: MPMX20_02464 - L-threonine 3-dehydrogenase, at 2,605,201 to 2,606,253 _02464 Position (kb) 2604 2605 2606Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2603.403 kb on + strandat 2603.436 kb on + strand, within MPMX20_02462at 2603.462 kb on + strand, within MPMX20_02462at 2603.499 kb on + strand, within MPMX20_02462at 2603.499 kb on + strand, within MPMX20_02462at 2603.499 kb on + strand, within MPMX20_02462at 2603.499 kb on + strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.507 kb on - strand, within MPMX20_02462at 2603.551 kb on - strand, within MPMX20_02462at 2603.566 kb on - strand, within MPMX20_02462at 2603.566 kb on - strand, within MPMX20_02462at 2603.601 kb on + strand, within MPMX20_02462at 2603.609 kb on - strand, within MPMX20_02462at 2603.643 kb on - strand, within MPMX20_02462at 2603.674 kb on - strand, within MPMX20_02462at 2603.755 kb on + strand, within MPMX20_02462at 2603.849 kb on + strand, within MPMX20_02462at 2603.876 kb on + strand, within MPMX20_02462at 2603.884 kb on - strand, within MPMX20_02462at 2603.975 kb on - strand, within MPMX20_02462at 2603.982 kb on - strand, within MPMX20_02462at 2604.012 kb on - strand, within MPMX20_02462at 2604.070 kb on + strand, within MPMX20_02462at 2604.162 kb on + strand, within MPMX20_02462at 2604.244 kb on - strand, within MPMX20_02462at 2604.246 kb on + strand, within MPMX20_02462at 2604.246 kb on + strand, within MPMX20_02462at 2604.254 kb on - strand, within MPMX20_02462at 2604.259 kb on + strand, within MPMX20_02462at 2604.267 kb on - strand, within MPMX20_02462at 2604.267 kb on - strand, within MPMX20_02462at 2604.374 kb on - strandat 2604.473 kb on - strandat 2604.483 kb on - strand, within MPMX20_02463at 2604.566 kb on - strand, within MPMX20_02463at 2604.577 kb on + strand, within MPMX20_02463at 2604.587 kb on + strand, within MPMX20_02463at 2604.665 kb on - strand, within MPMX20_02463at 2604.746 kb on + strand, within MPMX20_02463at 2604.754 kb on - strand, within MPMX20_02463at 2604.822 kb on + strand, within MPMX20_02463at 2604.846 kb on + strand, within MPMX20_02463at 2604.933 kb on - strand, within MPMX20_02463at 2604.937 kb on + strand, within MPMX20_02463at 2604.947 kb on + strand, within MPMX20_02463at 2604.947 kb on + strand, within MPMX20_02463at 2604.955 kb on - strand, within MPMX20_02463at 2604.955 kb on - strand, within MPMX20_02463at 2604.955 kb on - strand, within MPMX20_02463at 2605.048 kb on + strand, within MPMX20_02463at 2605.158 kb on + strandat 2605.282 kb on + strandat 2605.287 kb on + strandat 2605.297 kb on + strandat 2605.312 kb on + strand, within MPMX20_02464at 2605.320 kb on - strand, within MPMX20_02464at 2605.343 kb on - strand, within MPMX20_02464at 2605.453 kb on + strand, within MPMX20_02464at 2605.524 kb on + strand, within MPMX20_02464at 2605.524 kb on + strand, within MPMX20_02464at 2605.582 kb on - strand, within MPMX20_02464at 2605.611 kb on - strand, within MPMX20_02464at 2605.611 kb on - strand, within MPMX20_02464at 2605.622 kb on - strand, within MPMX20_02464at 2605.629 kb on + strand, within MPMX20_02464at 2605.694 kb on - strand, within MPMX20_02464at 2605.758 kb on + strand, within MPMX20_02464at 2605.818 kb on - strand, within MPMX20_02464at 2605.818 kb on - strand, within MPMX20_02464at 2605.824 kb on + strand, within MPMX20_02464at 2605.824 kb on + strand, within MPMX20_02464at 2605.926 kb on + strand, within MPMX20_02464at 2605.934 kb on - strand, within MPMX20_02464at 2605.952 kb on + strand, within MPMX20_02464at 2605.962 kb on + strand, within MPMX20_02464at 2606.003 kb on + strand, within MPMX20_02464at 2606.050 kb on + strand, within MPMX20_02464at 2606.069 kb on - strand, within MPMX20_02464at 2606.069 kb on - strand, within MPMX20_02464at 2606.069 kb on - strand, within MPMX20_02464at 2606.081 kb on + strand, within MPMX20_02464at 2606.081 kb on + strand, within MPMX20_02464at 2606.089 kb on - strand, within MPMX20_02464at 2606.142 kb on + strand, within MPMX20_02464

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b
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2,603,403 + -0.1
2,603,436 + MPMX20_02462 0.10 +0.6
2,603,462 + MPMX20_02462 0.13 -0.9
2,603,499 + MPMX20_02462 0.16 +0.2
2,603,499 + MPMX20_02462 0.16 -0.4
2,603,499 + MPMX20_02462 0.16 -1.3
2,603,499 + MPMX20_02462 0.16 +0.1
2,603,507 - MPMX20_02462 0.17 +0.2
2,603,507 - MPMX20_02462 0.17 -0.8
2,603,507 - MPMX20_02462 0.17 -1.3
2,603,507 - MPMX20_02462 0.17 -0.2
2,603,507 - MPMX20_02462 0.17 +0.0
2,603,507 - MPMX20_02462 0.17 +0.9
2,603,507 - MPMX20_02462 0.17 +0.0
2,603,507 - MPMX20_02462 0.17 +0.0
2,603,551 - MPMX20_02462 0.21 +0.2
2,603,566 - MPMX20_02462 0.23 +0.1
2,603,566 - MPMX20_02462 0.23 -0.5
2,603,601 + MPMX20_02462 0.26 -2.9
2,603,609 - MPMX20_02462 0.27 -1.5
2,603,643 - MPMX20_02462 0.30 -0.9
2,603,674 - MPMX20_02462 0.33 -0.3
2,603,755 + MPMX20_02462 0.41 -1.6
2,603,849 + MPMX20_02462 0.50 -0.3
2,603,876 + MPMX20_02462 0.52 -2.2
2,603,884 - MPMX20_02462 0.53 -0.0
2,603,975 - MPMX20_02462 0.61 +0.0
2,603,982 - MPMX20_02462 0.62 -0.1
2,604,012 - MPMX20_02462 0.65 +0.2
2,604,070 + MPMX20_02462 0.70 -0.4
2,604,162 + MPMX20_02462 0.79 +1.2
2,604,244 - MPMX20_02462 0.87 +0.2
2,604,246 + MPMX20_02462 0.87 -0.7
2,604,246 + MPMX20_02462 0.87 +1.0
2,604,254 - MPMX20_02462 0.88 +0.2
2,604,259 + MPMX20_02462 0.88 +0.0
2,604,267 - MPMX20_02462 0.89 +0.2
2,604,267 - MPMX20_02462 0.89 -0.2
2,604,374 - +0.3
2,604,473 - -1.0
2,604,483 - MPMX20_02463 0.11 -1.4
2,604,566 - MPMX20_02463 0.22 -0.2
2,604,577 + MPMX20_02463 0.23 -0.6
2,604,587 + MPMX20_02463 0.24 -1.5
2,604,665 - MPMX20_02463 0.34 +1.0
2,604,746 + MPMX20_02463 0.44 +2.2
2,604,754 - MPMX20_02463 0.45 -0.6
2,604,822 + MPMX20_02463 0.54 -1.0
2,604,846 + MPMX20_02463 0.57 +0.6
2,604,933 - MPMX20_02463 0.68 +0.1
2,604,937 + MPMX20_02463 0.69 -0.1
2,604,947 + MPMX20_02463 0.70 +0.4
2,604,947 + MPMX20_02463 0.70 -0.3
2,604,955 - MPMX20_02463 0.71 -0.5
2,604,955 - MPMX20_02463 0.71 -0.4
2,604,955 - MPMX20_02463 0.71 +1.6
2,605,048 + MPMX20_02463 0.83 -1.0
2,605,158 + +0.7
2,605,282 + +0.3
2,605,287 + +0.6
2,605,297 + +1.9
2,605,312 + MPMX20_02464 0.11 -1.4
2,605,320 - MPMX20_02464 0.11 -0.4
2,605,343 - MPMX20_02464 0.13 -0.3
2,605,453 + MPMX20_02464 0.24 -0.7
2,605,524 + MPMX20_02464 0.31 +1.2
2,605,524 + MPMX20_02464 0.31 -0.5
2,605,582 - MPMX20_02464 0.36 +0.8
2,605,611 - MPMX20_02464 0.39 +0.2
2,605,611 - MPMX20_02464 0.39 -1.1
2,605,622 - MPMX20_02464 0.40 +0.2
2,605,629 + MPMX20_02464 0.41 -0.2
2,605,694 - MPMX20_02464 0.47 -0.1
2,605,758 + MPMX20_02464 0.53 -0.1
2,605,818 - MPMX20_02464 0.59 +0.9
2,605,818 - MPMX20_02464 0.59 -0.1
2,605,824 + MPMX20_02464 0.59 +0.6
2,605,824 + MPMX20_02464 0.59 -0.9
2,605,926 + MPMX20_02464 0.69 +4.0
2,605,934 - MPMX20_02464 0.70 +0.4
2,605,952 + MPMX20_02464 0.71 -0.4
2,605,962 + MPMX20_02464 0.72 +0.4
2,606,003 + MPMX20_02464 0.76 -0.3
2,606,050 + MPMX20_02464 0.81 +0.5
2,606,069 - MPMX20_02464 0.82 +1.6
2,606,069 - MPMX20_02464 0.82 -1.1
2,606,069 - MPMX20_02464 0.82 +0.6
2,606,081 + MPMX20_02464 0.84 -1.0
2,606,081 + MPMX20_02464 0.84 +0.6
2,606,089 - MPMX20_02464 0.84 -0.1
2,606,142 + MPMX20_02464 0.89 +1.2

Or see this region's nucleotide sequence