Experiment: TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00736 and MPMX20_00737 are separated by 188 nucleotides MPMX20_00737 and MPMX20_00738 are separated by 133 nucleotides
MPMX20_00736: MPMX20_00736 - hypothetical protein, at 758,797 to 760,539
_00736
MPMX20_00737: MPMX20_00737 - Maltose regulon regulatory protein MalI, at 760,728 to 761,735
_00737
MPMX20_00738: MPMX20_00738 - 4-hydroxy-tetrahydrodipicolinate reductase, at 761,869 to 762,690
_00738
Position (kb) 760
761
762 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 759.765 kb on + strand, within MPMX20_00736 at 759.773 kb on - strand, within MPMX20_00736 at 759.864 kb on + strand, within MPMX20_00736 at 760.056 kb on + strand, within MPMX20_00736 at 760.064 kb on - strand, within MPMX20_00736 at 760.116 kb on - strand, within MPMX20_00736 at 760.124 kb on + strand, within MPMX20_00736 at 760.124 kb on + strand, within MPMX20_00736 at 760.132 kb on - strand, within MPMX20_00736 at 760.132 kb on - strand, within MPMX20_00736 at 760.244 kb on - strand, within MPMX20_00736 at 760.283 kb on - strand, within MPMX20_00736 at 760.294 kb on + strand, within MPMX20_00736 at 760.380 kb on + strand at 760.413 kb on + strand at 760.442 kb on - strand at 760.446 kb on + strand at 760.469 kb on + strand at 760.469 kb on + strand at 760.491 kb on + strand at 760.498 kb on + strand at 760.700 kb on + strand at 760.759 kb on + strand at 760.789 kb on + strand at 760.799 kb on + strand at 760.807 kb on - strand at 760.807 kb on - strand at 760.853 kb on + strand, within MPMX20_00737 at 760.971 kb on + strand, within MPMX20_00737 at 760.971 kb on + strand, within MPMX20_00737 at 760.971 kb on + strand, within MPMX20_00737 at 760.971 kb on + strand, within MPMX20_00737 at 760.971 kb on + strand, within MPMX20_00737 at 760.979 kb on - strand, within MPMX20_00737 at 760.999 kb on + strand, within MPMX20_00737 at 761.023 kb on + strand, within MPMX20_00737 at 761.035 kb on - strand, within MPMX20_00737 at 761.093 kb on + strand, within MPMX20_00737 at 761.093 kb on + strand, within MPMX20_00737 at 761.093 kb on + strand, within MPMX20_00737 at 761.101 kb on - strand, within MPMX20_00737 at 761.134 kb on + strand, within MPMX20_00737 at 761.134 kb on + strand, within MPMX20_00737 at 761.142 kb on - strand, within MPMX20_00737 at 761.142 kb on - strand, within MPMX20_00737 at 761.402 kb on - strand, within MPMX20_00737 at 761.418 kb on + strand, within MPMX20_00737 at 761.426 kb on - strand, within MPMX20_00737 at 761.460 kb on + strand, within MPMX20_00737 at 761.506 kb on - strand, within MPMX20_00737 at 761.533 kb on + strand, within MPMX20_00737 at 761.572 kb on + strand, within MPMX20_00737 at 761.572 kb on + strand, within MPMX20_00737 at 761.586 kb on + strand, within MPMX20_00737 at 761.654 kb on + strand at 761.688 kb on + strand at 761.701 kb on + strand at 761.745 kb on - strand at 761.786 kb on - strand at 761.819 kb on - strand at 761.822 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b remove 759,765 + MPMX20_00736 0.56 -0.9 759,773 - MPMX20_00736 0.56 +1.1 759,864 + MPMX20_00736 0.61 +0.8 760,056 + MPMX20_00736 0.72 +0.3 760,064 - MPMX20_00736 0.73 +3.3 760,116 - MPMX20_00736 0.76 +0.1 760,124 + MPMX20_00736 0.76 -2.0 760,124 + MPMX20_00736 0.76 -1.4 760,132 - MPMX20_00736 0.77 -1.3 760,132 - MPMX20_00736 0.77 -1.4 760,244 - MPMX20_00736 0.83 -0.2 760,283 - MPMX20_00736 0.85 +0.4 760,294 + MPMX20_00736 0.86 -0.1 760,380 + -1.5 760,413 + +0.1 760,442 - -0.9 760,446 + +0.9 760,469 + -1.2 760,469 + -0.6 760,491 + +1.9 760,498 + -0.3 760,700 + -0.8 760,759 + -0.4 760,789 + -1.8 760,799 + -0.1 760,807 - +1.5 760,807 - +0.3 760,853 + MPMX20_00737 0.12 -0.5 760,971 + MPMX20_00737 0.24 +0.5 760,971 + MPMX20_00737 0.24 -0.9 760,971 + MPMX20_00737 0.24 +0.2 760,971 + MPMX20_00737 0.24 +1.0 760,971 + MPMX20_00737 0.24 -0.7 760,979 - MPMX20_00737 0.25 -0.2 760,999 + MPMX20_00737 0.27 -1.5 761,023 + MPMX20_00737 0.29 -0.4 761,035 - MPMX20_00737 0.30 +0.8 761,093 + MPMX20_00737 0.36 +3.7 761,093 + MPMX20_00737 0.36 -0.2 761,093 + MPMX20_00737 0.36 +0.5 761,101 - MPMX20_00737 0.37 -0.1 761,134 + MPMX20_00737 0.40 -0.2 761,134 + MPMX20_00737 0.40 +0.7 761,142 - MPMX20_00737 0.41 +3.7 761,142 - MPMX20_00737 0.41 -0.3 761,402 - MPMX20_00737 0.67 +1.5 761,418 + MPMX20_00737 0.68 -0.8 761,426 - MPMX20_00737 0.69 -2.3 761,460 + MPMX20_00737 0.73 -0.3 761,506 - MPMX20_00737 0.77 +0.5 761,533 + MPMX20_00737 0.80 -1.1 761,572 + MPMX20_00737 0.84 -1.1 761,572 + MPMX20_00737 0.84 +1.3 761,586 + MPMX20_00737 0.85 +0.3 761,654 + -1.3 761,688 + +0.7 761,701 + +1.8 761,745 - -0.5 761,786 - +0.7 761,819 - -0.3 761,822 + +0.2
Or see this region's nucleotide sequence