Experiment: TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00464 and MPMX20_00465 are separated by 172 nucleotides MPMX20_00465 and MPMX20_00466 are separated by 136 nucleotides MPMX20_00466 and MPMX20_00467 are separated by 158 nucleotides
MPMX20_00464: MPMX20_00464 - hypothetical protein, at 480,852 to 482,783
_00464
MPMX20_00465: MPMX20_00465 - hypothetical protein, at 482,956 to 483,243
_00465
MPMX20_00466: MPMX20_00466 - Lipoprotein BsmA, at 483,380 to 483,688
_00466
MPMX20_00467: MPMX20_00467 - hypothetical protein, at 483,847 to 484,569
_00467
Position (kb) 482
483
484 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 481.994 kb on + strand, within MPMX20_00464 at 482.007 kb on - strand, within MPMX20_00464 at 482.012 kb on - strand, within MPMX20_00464 at 482.035 kb on + strand, within MPMX20_00464 at 482.098 kb on + strand, within MPMX20_00464 at 482.116 kb on - strand, within MPMX20_00464 at 482.140 kb on + strand, within MPMX20_00464 at 482.140 kb on + strand, within MPMX20_00464 at 482.222 kb on - strand, within MPMX20_00464 at 482.224 kb on + strand, within MPMX20_00464 at 482.241 kb on + strand, within MPMX20_00464 at 482.244 kb on - strand, within MPMX20_00464 at 482.249 kb on - strand, within MPMX20_00464 at 482.265 kb on - strand, within MPMX20_00464 at 482.299 kb on + strand, within MPMX20_00464 at 482.304 kb on + strand, within MPMX20_00464 at 482.326 kb on - strand, within MPMX20_00464 at 482.348 kb on + strand, within MPMX20_00464 at 482.359 kb on - strand, within MPMX20_00464 at 482.384 kb on + strand, within MPMX20_00464 at 482.393 kb on + strand, within MPMX20_00464 at 482.442 kb on + strand, within MPMX20_00464 at 482.467 kb on + strand, within MPMX20_00464 at 482.560 kb on + strand, within MPMX20_00464 at 482.565 kb on + strand, within MPMX20_00464 at 482.566 kb on + strand, within MPMX20_00464 at 482.590 kb on + strand at 482.598 kb on - strand at 482.616 kb on - strand at 482.744 kb on + strand at 482.744 kb on + strand at 482.744 kb on + strand at 482.751 kb on + strand at 482.756 kb on + strand at 482.759 kb on - strand at 482.764 kb on - strand at 482.764 kb on - strand at 482.803 kb on + strand at 482.805 kb on + strand at 482.974 kb on - strand at 482.984 kb on - strand at 482.995 kb on + strand, within MPMX20_00465 at 483.028 kb on + strand, within MPMX20_00465 at 483.043 kb on - strand, within MPMX20_00465 at 483.086 kb on - strand, within MPMX20_00465 at 483.117 kb on - strand, within MPMX20_00465 at 483.149 kb on - strand, within MPMX20_00465 at 483.166 kb on + strand, within MPMX20_00465 at 483.173 kb on + strand, within MPMX20_00465 at 483.181 kb on - strand, within MPMX20_00465 at 483.181 kb on - strand, within MPMX20_00465 at 483.186 kb on + strand, within MPMX20_00465 at 483.196 kb on + strand, within MPMX20_00465 at 483.196 kb on + strand, within MPMX20_00465 at 483.196 kb on + strand, within MPMX20_00465 at 483.204 kb on - strand, within MPMX20_00465 at 483.204 kb on - strand, within MPMX20_00465 at 483.204 kb on - strand, within MPMX20_00465 at 483.204 kb on - strand, within MPMX20_00465 at 483.213 kb on + strand, within MPMX20_00465 at 483.216 kb on - strand at 483.262 kb on + strand at 483.267 kb on + strand at 483.290 kb on - strand at 483.306 kb on + strand at 483.323 kb on + strand at 483.341 kb on - strand at 483.351 kb on - strand at 483.353 kb on + strand at 483.353 kb on + strand at 483.361 kb on - strand at 483.361 kb on - strand at 483.393 kb on + strand at 483.405 kb on + strand at 483.405 kb on + strand at 483.411 kb on - strand, within MPMX20_00466 at 483.413 kb on - strand, within MPMX20_00466 at 483.415 kb on + strand, within MPMX20_00466 at 483.418 kb on - strand, within MPMX20_00466 at 483.418 kb on - strand, within MPMX20_00466 at 483.418 kb on - strand, within MPMX20_00466 at 483.467 kb on + strand, within MPMX20_00466 at 483.477 kb on + strand, within MPMX20_00466 at 483.485 kb on - strand, within MPMX20_00466 at 483.485 kb on - strand, within MPMX20_00466 at 483.492 kb on + strand, within MPMX20_00466 at 483.513 kb on - strand, within MPMX20_00466 at 483.516 kb on + strand, within MPMX20_00466 at 483.521 kb on + strand, within MPMX20_00466 at 483.526 kb on + strand, within MPMX20_00466 at 483.548 kb on + strand, within MPMX20_00466 at 483.548 kb on + strand, within MPMX20_00466 at 483.555 kb on - strand, within MPMX20_00466 at 483.556 kb on - strand, within MPMX20_00466 at 483.565 kb on + strand, within MPMX20_00466 at 483.586 kb on + strand, within MPMX20_00466 at 483.594 kb on - strand, within MPMX20_00466 at 483.618 kb on + strand, within MPMX20_00466 at 483.626 kb on - strand, within MPMX20_00466 at 483.646 kb on + strand, within MPMX20_00466 at 483.647 kb on - strand, within MPMX20_00466 at 483.677 kb on + strand at 483.711 kb on + strand at 483.711 kb on + strand at 483.714 kb on - strand at 483.719 kb on - strand at 483.719 kb on - strand at 483.754 kb on + strand at 483.762 kb on - strand at 483.762 kb on - strand at 483.806 kb on + strand at 483.814 kb on - strand at 483.814 kb on - strand at 483.828 kb on + strand at 483.841 kb on - strand at 483.859 kb on + strand at 483.901 kb on - strand at 484.031 kb on + strand, within MPMX20_00467 at 484.031 kb on + strand, within MPMX20_00467 at 484.031 kb on + strand, within MPMX20_00467 at 484.034 kb on - strand, within MPMX20_00467 at 484.048 kb on + strand, within MPMX20_00467 at 484.150 kb on + strand, within MPMX20_00467 at 484.153 kb on - strand, within MPMX20_00467 at 484.227 kb on + strand, within MPMX20_00467
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b remove 481,994 + MPMX20_00464 0.59 -1.4 482,007 - MPMX20_00464 0.60 +0.6 482,012 - MPMX20_00464 0.60 -1.7 482,035 + MPMX20_00464 0.61 +0.1 482,098 + MPMX20_00464 0.64 +0.4 482,116 - MPMX20_00464 0.65 +1.6 482,140 + MPMX20_00464 0.67 +1.2 482,140 + MPMX20_00464 0.67 -1.0 482,222 - MPMX20_00464 0.71 +1.1 482,224 + MPMX20_00464 0.71 +0.1 482,241 + MPMX20_00464 0.72 -0.2 482,244 - MPMX20_00464 0.72 +0.2 482,249 - MPMX20_00464 0.72 +1.0 482,265 - MPMX20_00464 0.73 +0.6 482,299 + MPMX20_00464 0.75 +0.1 482,304 + MPMX20_00464 0.75 -0.7 482,326 - MPMX20_00464 0.76 -0.1 482,348 + MPMX20_00464 0.77 +0.2 482,359 - MPMX20_00464 0.78 -0.0 482,384 + MPMX20_00464 0.79 -1.3 482,393 + MPMX20_00464 0.80 +0.4 482,442 + MPMX20_00464 0.82 +2.3 482,467 + MPMX20_00464 0.84 -0.7 482,560 + MPMX20_00464 0.88 +0.2 482,565 + MPMX20_00464 0.89 +1.4 482,566 + MPMX20_00464 0.89 -0.6 482,590 + -0.8 482,598 - +0.5 482,616 - +0.7 482,744 + +2.2 482,744 + -1.6 482,744 + +0.5 482,751 + +10.3 482,756 + -3.3 482,759 - -0.2 482,764 - -1.2 482,764 - -1.2 482,803 + -0.4 482,805 + +0.6 482,974 - +1.8 482,984 - +1.1 482,995 + MPMX20_00465 0.14 -0.8 483,028 + MPMX20_00465 0.25 +1.6 483,043 - MPMX20_00465 0.30 +1.6 483,086 - MPMX20_00465 0.45 +1.4 483,117 - MPMX20_00465 0.56 +0.6 483,149 - MPMX20_00465 0.67 +1.9 483,166 + MPMX20_00465 0.73 +1.4 483,173 + MPMX20_00465 0.75 +2.7 483,181 - MPMX20_00465 0.78 +0.6 483,181 - MPMX20_00465 0.78 +0.0 483,186 + MPMX20_00465 0.80 +1.1 483,196 + MPMX20_00465 0.83 +1.2 483,196 + MPMX20_00465 0.83 +1.6 483,196 + MPMX20_00465 0.83 +0.7 483,204 - MPMX20_00465 0.86 +1.5 483,204 - MPMX20_00465 0.86 +1.3 483,204 - MPMX20_00465 0.86 +1.4 483,204 - MPMX20_00465 0.86 +1.7 483,213 + MPMX20_00465 0.89 +1.6 483,216 - +1.2 483,262 + -0.6 483,267 + +1.2 483,290 - +0.3 483,306 + +2.8 483,323 + -0.4 483,341 - +5.1 483,351 - +1.2 483,353 + +0.2 483,353 + +0.4 483,361 - +1.2 483,361 - +0.5 483,393 + -0.8 483,405 + +1.4 483,405 + +1.6 483,411 - MPMX20_00466 0.10 -0.6 483,413 - MPMX20_00466 0.11 +0.9 483,415 + MPMX20_00466 0.11 +0.2 483,418 - MPMX20_00466 0.12 +1.5 483,418 - MPMX20_00466 0.12 +1.2 483,418 - MPMX20_00466 0.12 +0.1 483,467 + MPMX20_00466 0.28 +1.5 483,477 + MPMX20_00466 0.31 +3.5 483,485 - MPMX20_00466 0.34 +0.6 483,485 - MPMX20_00466 0.34 -0.1 483,492 + MPMX20_00466 0.36 +1.2 483,513 - MPMX20_00466 0.43 -1.2 483,516 + MPMX20_00466 0.44 +0.9 483,521 + MPMX20_00466 0.46 +1.3 483,526 + MPMX20_00466 0.47 +1.3 483,548 + MPMX20_00466 0.54 +1.4 483,548 + MPMX20_00466 0.54 -1.1 483,555 - MPMX20_00466 0.57 +2.2 483,556 - MPMX20_00466 0.57 -0.0 483,565 + MPMX20_00466 0.60 +1.1 483,586 + MPMX20_00466 0.67 +0.4 483,594 - MPMX20_00466 0.69 +1.2 483,618 + MPMX20_00466 0.77 +2.6 483,626 - MPMX20_00466 0.80 +0.3 483,646 + MPMX20_00466 0.86 +2.7 483,647 - MPMX20_00466 0.86 +0.3 483,677 + +0.6 483,711 + +1.4 483,711 + +2.0 483,714 - -0.5 483,719 - -1.2 483,719 - +0.4 483,754 + +0.4 483,762 - -1.0 483,762 - +2.0 483,806 + +0.6 483,814 - -0.7 483,814 - +1.0 483,828 + -2.1 483,841 - +0.1 483,859 + -0.5 483,901 - -0.4 484,031 + MPMX20_00467 0.25 +0.4 484,031 + MPMX20_00467 0.25 -0.1 484,031 + MPMX20_00467 0.25 +0.7 484,034 - MPMX20_00467 0.26 -0.8 484,048 + MPMX20_00467 0.28 +0.3 484,150 + MPMX20_00467 0.42 -0.6 484,153 - MPMX20_00467 0.42 -0.2 484,227 + MPMX20_00467 0.53 +0.4
Or see this region's nucleotide sequence