Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02773

Experiment: 1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02771 and MPMX20_02772 are separated by 264 nucleotidesMPMX20_02772 and MPMX20_02773 overlap by 4 nucleotidesMPMX20_02773 and MPMX20_02774 are separated by 51 nucleotidesMPMX20_02774 and MPMX20_02775 are separated by 40 nucleotides MPMX20_02771: MPMX20_02771 - Aspartate--tRNA ligase, at 2,925,166 to 2,926,953 _02771 MPMX20_02772: MPMX20_02772 - Isochorismatase family protein YecD, at 2,927,218 to 2,927,784 _02772 MPMX20_02773: MPMX20_02773 - hypothetical protein, at 2,927,781 to 2,928,599 _02773 MPMX20_02774: MPMX20_02774 - Inner membrane protein YecN, at 2,928,651 to 2,929,046 _02774 MPMX20_02775: MPMX20_02775 - Carboxy-S-adenosyl-L-methionine synthase, at 2,929,087 to 2,929,830 _02775 Position (kb) 2927 2928 2929Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2927.082 kb on + strandat 2927.082 kb on + strandat 2927.109 kb on + strandat 2927.174 kb on - strandat 2927.182 kb on + strandat 2927.225 kb on + strandat 2927.278 kb on - strand, within MPMX20_02772at 2927.293 kb on + strand, within MPMX20_02772at 2927.303 kb on + strand, within MPMX20_02772at 2927.311 kb on - strand, within MPMX20_02772at 2927.360 kb on - strand, within MPMX20_02772at 2927.411 kb on + strand, within MPMX20_02772at 2927.425 kb on + strand, within MPMX20_02772at 2927.557 kb on - strand, within MPMX20_02772at 2927.648 kb on - strand, within MPMX20_02772at 2927.715 kb on - strand, within MPMX20_02772at 2927.717 kb on + strand, within MPMX20_02772at 2927.756 kb on + strandat 2927.788 kb on + strandat 2927.788 kb on + strandat 2927.788 kb on + strandat 2927.788 kb on + strandat 2927.788 kb on + strandat 2927.788 kb on + strandat 2927.796 kb on - strandat 2927.796 kb on - strandat 2927.796 kb on - strandat 2927.806 kb on - strandat 2927.839 kb on - strandat 2927.840 kb on - strandat 2927.858 kb on - strandat 2927.872 kb on + strand, within MPMX20_02773at 2927.903 kb on + strand, within MPMX20_02773at 2927.903 kb on + strand, within MPMX20_02773at 2927.903 kb on + strand, within MPMX20_02773at 2927.903 kb on + strand, within MPMX20_02773at 2927.903 kb on + strand, within MPMX20_02773at 2927.911 kb on - strand, within MPMX20_02773at 2927.911 kb on - strand, within MPMX20_02773at 2927.911 kb on - strand, within MPMX20_02773at 2927.916 kb on - strand, within MPMX20_02773at 2927.932 kb on - strand, within MPMX20_02773at 2927.990 kb on - strand, within MPMX20_02773at 2927.992 kb on + strand, within MPMX20_02773at 2928.000 kb on - strand, within MPMX20_02773at 2928.015 kb on + strand, within MPMX20_02773at 2928.015 kb on + strand, within MPMX20_02773at 2928.023 kb on - strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.163 kb on + strand, within MPMX20_02773at 2928.171 kb on - strand, within MPMX20_02773at 2928.178 kb on - strand, within MPMX20_02773at 2928.213 kb on + strand, within MPMX20_02773at 2928.213 kb on + strand, within MPMX20_02773at 2928.221 kb on - strand, within MPMX20_02773at 2928.241 kb on + strand, within MPMX20_02773at 2928.270 kb on + strand, within MPMX20_02773at 2928.278 kb on - strand, within MPMX20_02773at 2928.326 kb on + strand, within MPMX20_02773at 2928.465 kb on - strand, within MPMX20_02773at 2928.502 kb on + strand, within MPMX20_02773at 2928.502 kb on + strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.582 kb on - strandat 2928.605 kb on + strandat 2928.656 kb on - strandat 2928.679 kb on + strandat 2928.729 kb on - strand, within MPMX20_02774at 2928.791 kb on + strand, within MPMX20_02774at 2928.801 kb on + strand, within MPMX20_02774at 2928.809 kb on - strand, within MPMX20_02774at 2928.809 kb on - strand, within MPMX20_02774at 2928.812 kb on - strand, within MPMX20_02774at 2928.860 kb on + strand, within MPMX20_02774at 2928.860 kb on + strand, within MPMX20_02774at 2928.870 kb on + strand, within MPMX20_02774at 2928.877 kb on + strand, within MPMX20_02774at 2928.878 kb on - strand, within MPMX20_02774at 2928.885 kb on - strand, within MPMX20_02774at 2928.885 kb on - strand, within MPMX20_02774at 2928.937 kb on - strand, within MPMX20_02774at 2929.004 kb on + strand, within MPMX20_02774at 2929.012 kb on - strandat 2929.012 kb on - strandat 2929.046 kb on + strandat 2929.121 kb on + strandat 2929.135 kb on - strandat 2929.192 kb on + strand, within MPMX20_02775at 2929.233 kb on + strand, within MPMX20_02775at 2929.270 kb on + strand, within MPMX20_02775at 2929.270 kb on + strand, within MPMX20_02775at 2929.356 kb on - strand, within MPMX20_02775at 2929.504 kb on + strand, within MPMX20_02775at 2929.512 kb on - strand, within MPMX20_02775at 2929.512 kb on - strand, within MPMX20_02775

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b
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2,927,082 + -0.6
2,927,082 + -0.2
2,927,109 + -1.4
2,927,174 - +0.3
2,927,182 + +1.1
2,927,225 + -0.2
2,927,278 - MPMX20_02772 0.11 -0.6
2,927,293 + MPMX20_02772 0.13 -0.2
2,927,303 + MPMX20_02772 0.15 +0.1
2,927,311 - MPMX20_02772 0.16 +1.2
2,927,360 - MPMX20_02772 0.25 +1.2
2,927,411 + MPMX20_02772 0.34 -0.6
2,927,425 + MPMX20_02772 0.37 -0.0
2,927,557 - MPMX20_02772 0.60 -1.4
2,927,648 - MPMX20_02772 0.76 -2.2
2,927,715 - MPMX20_02772 0.88 +0.0
2,927,717 + MPMX20_02772 0.88 -1.1
2,927,756 + -1.0
2,927,788 + -0.2
2,927,788 + -0.3
2,927,788 + -0.1
2,927,788 + +2.1
2,927,788 + +1.2
2,927,788 + -0.2
2,927,796 - +0.6
2,927,796 - -0.5
2,927,796 - +0.5
2,927,806 - +0.2
2,927,839 - -0.8
2,927,840 - +0.4
2,927,858 - -0.1
2,927,872 + MPMX20_02773 0.11 +1.0
2,927,903 + MPMX20_02773 0.15 -1.0
2,927,903 + MPMX20_02773 0.15 +1.5
2,927,903 + MPMX20_02773 0.15 -0.1
2,927,903 + MPMX20_02773 0.15 -1.7
2,927,903 + MPMX20_02773 0.15 -0.8
2,927,911 - MPMX20_02773 0.16 -1.3
2,927,911 - MPMX20_02773 0.16 -0.6
2,927,911 - MPMX20_02773 0.16 +0.2
2,927,916 - MPMX20_02773 0.16 -0.9
2,927,932 - MPMX20_02773 0.18 -0.7
2,927,990 - MPMX20_02773 0.26 +1.2
2,927,992 + MPMX20_02773 0.26 -2.7
2,928,000 - MPMX20_02773 0.27 -1.9
2,928,015 + MPMX20_02773 0.29 -1.1
2,928,015 + MPMX20_02773 0.29 -0.6
2,928,023 - MPMX20_02773 0.30 +0.3
2,928,094 + MPMX20_02773 0.38 -1.6
2,928,094 + MPMX20_02773 0.38 -0.9
2,928,094 + MPMX20_02773 0.38 -1.8
2,928,094 + MPMX20_02773 0.38 -0.6
2,928,094 + MPMX20_02773 0.38 +0.2
2,928,094 + MPMX20_02773 0.38 -1.4
2,928,094 + MPMX20_02773 0.38 +1.2
2,928,102 - MPMX20_02773 0.39 -1.7
2,928,102 - MPMX20_02773 0.39 +0.1
2,928,102 - MPMX20_02773 0.39 +0.0
2,928,102 - MPMX20_02773 0.39 -0.5
2,928,102 - MPMX20_02773 0.39 -0.1
2,928,102 - MPMX20_02773 0.39 +2.7
2,928,102 - MPMX20_02773 0.39 +0.9
2,928,102 - MPMX20_02773 0.39 -0.6
2,928,102 - MPMX20_02773 0.39 -0.3
2,928,102 - MPMX20_02773 0.39 +0.6
2,928,102 - MPMX20_02773 0.39 -1.2
2,928,102 - MPMX20_02773 0.39 -0.5
2,928,163 + MPMX20_02773 0.47 -1.0
2,928,171 - MPMX20_02773 0.48 -0.7
2,928,178 - MPMX20_02773 0.48 -0.7
2,928,213 + MPMX20_02773 0.53 +3.1
2,928,213 + MPMX20_02773 0.53 +0.6
2,928,221 - MPMX20_02773 0.54 +0.1
2,928,241 + MPMX20_02773 0.56 -0.4
2,928,270 + MPMX20_02773 0.60 -1.2
2,928,278 - MPMX20_02773 0.61 -1.9
2,928,326 + MPMX20_02773 0.67 -1.1
2,928,465 - MPMX20_02773 0.84 +0.2
2,928,502 + MPMX20_02773 0.88 -1.5
2,928,502 + MPMX20_02773 0.88 -1.1
2,928,510 - MPMX20_02773 0.89 -0.9
2,928,510 - MPMX20_02773 0.89 -0.2
2,928,510 - MPMX20_02773 0.89 -0.2
2,928,510 - MPMX20_02773 0.89 -2.0
2,928,582 - +0.7
2,928,605 + +0.7
2,928,656 - +0.9
2,928,679 + +0.2
2,928,729 - MPMX20_02774 0.20 -1.7
2,928,791 + MPMX20_02774 0.35 -1.1
2,928,801 + MPMX20_02774 0.38 +0.7
2,928,809 - MPMX20_02774 0.40 -0.3
2,928,809 - MPMX20_02774 0.40 -1.0
2,928,812 - MPMX20_02774 0.41 +0.1
2,928,860 + MPMX20_02774 0.53 +1.7
2,928,860 + MPMX20_02774 0.53 +0.5
2,928,870 + MPMX20_02774 0.55 +0.1
2,928,877 + MPMX20_02774 0.57 -0.3
2,928,878 - MPMX20_02774 0.57 +0.7
2,928,885 - MPMX20_02774 0.59 -0.9
2,928,885 - MPMX20_02774 0.59 -1.0
2,928,937 - MPMX20_02774 0.72 +1.0
2,929,004 + MPMX20_02774 0.89 +1.8
2,929,012 - +2.2
2,929,012 - +1.7
2,929,046 + -1.2
2,929,121 + +1.1
2,929,135 - +0.0
2,929,192 + MPMX20_02775 0.14 +0.2
2,929,233 + MPMX20_02775 0.20 -0.5
2,929,270 + MPMX20_02775 0.25 -1.1
2,929,270 + MPMX20_02775 0.25 -0.1
2,929,356 - MPMX20_02775 0.36 -1.0
2,929,504 + MPMX20_02775 0.56 -1.6
2,929,512 - MPMX20_02775 0.57 -0.4
2,929,512 - MPMX20_02775 0.57 -1.3

Or see this region's nucleotide sequence