Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01763

Experiment: 1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01762 and MPMX20_01763 are separated by 74 nucleotidesMPMX20_01763 and MPMX20_01764 are separated by 106 nucleotides MPMX20_01762: MPMX20_01762 - Flagellar hook-associated protein 3, at 1,853,290 to 1,854,243 _01762 MPMX20_01763: MPMX20_01763 - sugar efflux transporter, at 1,854,318 to 1,855,532 _01763 MPMX20_01764: MPMX20_01764 - HTH-type transcriptional regulator DmlR, at 1,855,639 to 1,856,577 _01764 Position (kb) 1854 1855 1856Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1853.371 kb on + strandat 1853.553 kb on - strand, within MPMX20_01762at 1853.563 kb on - strand, within MPMX20_01762at 1853.753 kb on - strand, within MPMX20_01762at 1853.753 kb on - strand, within MPMX20_01762at 1853.778 kb on + strand, within MPMX20_01762at 1853.778 kb on + strand, within MPMX20_01762at 1853.786 kb on - strand, within MPMX20_01762at 1853.786 kb on - strand, within MPMX20_01762at 1853.786 kb on - strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.823 kb on - strand, within MPMX20_01762at 1853.823 kb on - strand, within MPMX20_01762at 1853.849 kb on + strand, within MPMX20_01762at 1853.857 kb on - strand, within MPMX20_01762at 1853.862 kb on - strand, within MPMX20_01762at 1853.867 kb on - strand, within MPMX20_01762at 1853.878 kb on - strand, within MPMX20_01762at 1853.967 kb on - strand, within MPMX20_01762at 1854.075 kb on + strand, within MPMX20_01762at 1854.083 kb on - strand, within MPMX20_01762at 1854.094 kb on - strand, within MPMX20_01762at 1854.096 kb on + strand, within MPMX20_01762at 1854.096 kb on + strand, within MPMX20_01762at 1854.096 kb on + strand, within MPMX20_01762at 1854.114 kb on - strand, within MPMX20_01762at 1854.245 kb on + strandat 1854.252 kb on - strandat 1854.255 kb on + strandat 1854.342 kb on + strandat 1854.343 kb on - strandat 1854.363 kb on - strandat 1854.375 kb on - strandat 1854.408 kb on + strandat 1854.462 kb on - strand, within MPMX20_01763at 1854.467 kb on - strand, within MPMX20_01763at 1854.519 kb on - strand, within MPMX20_01763at 1854.519 kb on - strand, within MPMX20_01763at 1854.586 kb on - strand, within MPMX20_01763at 1854.586 kb on - strand, within MPMX20_01763at 1854.669 kb on + strand, within MPMX20_01763at 1854.669 kb on + strand, within MPMX20_01763at 1854.679 kb on + strand, within MPMX20_01763at 1854.687 kb on - strand, within MPMX20_01763at 1854.767 kb on + strand, within MPMX20_01763at 1854.792 kb on + strand, within MPMX20_01763at 1854.792 kb on + strand, within MPMX20_01763at 1854.813 kb on - strand, within MPMX20_01763at 1854.827 kb on + strand, within MPMX20_01763at 1854.835 kb on - strand, within MPMX20_01763at 1854.922 kb on + strand, within MPMX20_01763at 1854.927 kb on + strand, within MPMX20_01763at 1854.932 kb on + strand, within MPMX20_01763at 1854.932 kb on + strand, within MPMX20_01763at 1854.935 kb on - strand, within MPMX20_01763at 1854.937 kb on + strand, within MPMX20_01763at 1854.950 kb on - strand, within MPMX20_01763at 1854.950 kb on - strand, within MPMX20_01763at 1855.008 kb on + strand, within MPMX20_01763at 1855.030 kb on - strand, within MPMX20_01763at 1855.056 kb on - strand, within MPMX20_01763at 1855.095 kb on + strand, within MPMX20_01763at 1855.244 kb on + strand, within MPMX20_01763at 1855.273 kb on - strand, within MPMX20_01763at 1855.369 kb on + strand, within MPMX20_01763at 1855.451 kb on + strandat 1855.519 kb on + strandat 1855.546 kb on + strandat 1855.554 kb on - strandat 1855.588 kb on + strandat 1855.593 kb on + strandat 1855.596 kb on - strandat 1855.675 kb on - strandat 1855.685 kb on + strandat 1855.732 kb on - strandat 1855.744 kb on + strand, within MPMX20_01764at 1855.884 kb on - strand, within MPMX20_01764at 1855.914 kb on + strand, within MPMX20_01764at 1855.961 kb on + strand, within MPMX20_01764at 1855.969 kb on - strand, within MPMX20_01764at 1856.007 kb on + strand, within MPMX20_01764at 1856.015 kb on - strand, within MPMX20_01764at 1856.076 kb on + strand, within MPMX20_01764at 1856.120 kb on + strand, within MPMX20_01764at 1856.138 kb on - strand, within MPMX20_01764at 1856.140 kb on + strand, within MPMX20_01764at 1856.148 kb on - strand, within MPMX20_01764at 1856.148 kb on - strand, within MPMX20_01764at 1856.150 kb on + strand, within MPMX20_01764at 1856.150 kb on + strand, within MPMX20_01764at 1856.162 kb on + strand, within MPMX20_01764at 1856.240 kb on + strand, within MPMX20_01764at 1856.305 kb on - strand, within MPMX20_01764at 1856.356 kb on + strand, within MPMX20_01764at 1856.364 kb on - strand, within MPMX20_01764at 1856.365 kb on - strand, within MPMX20_01764

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b
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1,853,371 + -0.6
1,853,553 - MPMX20_01762 0.28 +0.3
1,853,563 - MPMX20_01762 0.29 -2.2
1,853,753 - MPMX20_01762 0.49 -0.6
1,853,753 - MPMX20_01762 0.49 -0.1
1,853,778 + MPMX20_01762 0.51 -1.1
1,853,778 + MPMX20_01762 0.51 -0.4
1,853,786 - MPMX20_01762 0.52 -1.2
1,853,786 - MPMX20_01762 0.52 +0.4
1,853,786 - MPMX20_01762 0.52 -1.7
1,853,815 + MPMX20_01762 0.55 -1.1
1,853,815 + MPMX20_01762 0.55 -0.6
1,853,815 + MPMX20_01762 0.55 +2.1
1,853,815 + MPMX20_01762 0.55 -0.0
1,853,823 - MPMX20_01762 0.56 -0.5
1,853,823 - MPMX20_01762 0.56 -1.1
1,853,849 + MPMX20_01762 0.59 -2.0
1,853,857 - MPMX20_01762 0.59 +1.1
1,853,862 - MPMX20_01762 0.60 -2.6
1,853,867 - MPMX20_01762 0.60 +0.4
1,853,878 - MPMX20_01762 0.62 -0.4
1,853,967 - MPMX20_01762 0.71 -0.5
1,854,075 + MPMX20_01762 0.82 -0.7
1,854,083 - MPMX20_01762 0.83 +0.8
1,854,094 - MPMX20_01762 0.84 -0.2
1,854,096 + MPMX20_01762 0.84 -0.1
1,854,096 + MPMX20_01762 0.84 +0.5
1,854,096 + MPMX20_01762 0.84 +0.7
1,854,114 - MPMX20_01762 0.86 +0.8
1,854,245 + -1.4
1,854,252 - -0.7
1,854,255 + -1.1
1,854,342 + -1.0
1,854,343 - -1.7
1,854,363 - -1.7
1,854,375 - -0.9
1,854,408 + -1.4
1,854,462 - MPMX20_01763 0.12 +0.8
1,854,467 - MPMX20_01763 0.12 +1.1
1,854,519 - MPMX20_01763 0.17 -0.1
1,854,519 - MPMX20_01763 0.17 -0.0
1,854,586 - MPMX20_01763 0.22 +0.2
1,854,586 - MPMX20_01763 0.22 -2.6
1,854,669 + MPMX20_01763 0.29 +0.3
1,854,669 + MPMX20_01763 0.29 -1.8
1,854,679 + MPMX20_01763 0.30 -0.2
1,854,687 - MPMX20_01763 0.30 +0.5
1,854,767 + MPMX20_01763 0.37 +0.5
1,854,792 + MPMX20_01763 0.39 +0.6
1,854,792 + MPMX20_01763 0.39 +0.6
1,854,813 - MPMX20_01763 0.41 -0.3
1,854,827 + MPMX20_01763 0.42 +0.5
1,854,835 - MPMX20_01763 0.43 +1.3
1,854,922 + MPMX20_01763 0.50 +0.7
1,854,927 + MPMX20_01763 0.50 -0.8
1,854,932 + MPMX20_01763 0.51 -0.4
1,854,932 + MPMX20_01763 0.51 +0.7
1,854,935 - MPMX20_01763 0.51 -0.9
1,854,937 + MPMX20_01763 0.51 -0.2
1,854,950 - MPMX20_01763 0.52 +0.5
1,854,950 - MPMX20_01763 0.52 -1.0
1,855,008 + MPMX20_01763 0.57 -0.3
1,855,030 - MPMX20_01763 0.59 +4.6
1,855,056 - MPMX20_01763 0.61 -0.2
1,855,095 + MPMX20_01763 0.64 -0.1
1,855,244 + MPMX20_01763 0.76 -1.7
1,855,273 - MPMX20_01763 0.79 +0.8
1,855,369 + MPMX20_01763 0.87 -1.3
1,855,451 + -1.1
1,855,519 + -1.8
1,855,546 + -0.9
1,855,554 - +0.6
1,855,588 + +0.4
1,855,593 + -1.1
1,855,596 - +1.4
1,855,675 - +1.5
1,855,685 + +0.3
1,855,732 - -0.9
1,855,744 + MPMX20_01764 0.11 -0.2
1,855,884 - MPMX20_01764 0.26 -1.3
1,855,914 + MPMX20_01764 0.29 -0.9
1,855,961 + MPMX20_01764 0.34 -1.4
1,855,969 - MPMX20_01764 0.35 +1.1
1,856,007 + MPMX20_01764 0.39 +0.3
1,856,015 - MPMX20_01764 0.40 -0.5
1,856,076 + MPMX20_01764 0.47 -0.4
1,856,120 + MPMX20_01764 0.51 -1.8
1,856,138 - MPMX20_01764 0.53 +3.0
1,856,140 + MPMX20_01764 0.53 -0.9
1,856,148 - MPMX20_01764 0.54 +2.1
1,856,148 - MPMX20_01764 0.54 -0.1
1,856,150 + MPMX20_01764 0.54 -0.4
1,856,150 + MPMX20_01764 0.54 -1.0
1,856,162 + MPMX20_01764 0.56 -0.0
1,856,240 + MPMX20_01764 0.64 +2.1
1,856,305 - MPMX20_01764 0.71 -2.1
1,856,356 + MPMX20_01764 0.76 +2.3
1,856,364 - MPMX20_01764 0.77 -0.2
1,856,365 - MPMX20_01764 0.77 -0.0

Or see this region's nucleotide sequence