Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04257

Experiment: M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04256 and MPMX20_04257 overlap by 4 nucleotidesMPMX20_04257 and MPMX20_04258 are separated by 30 nucleotidesMPMX20_04258 and MPMX20_04259 are separated by 66 nucleotides MPMX20_04256: MPMX20_04256 - hypothetical protein, at 4,439,083 to 4,440,105 _04256 MPMX20_04257: MPMX20_04257 - hypothetical protein, at 4,440,102 to 4,440,320 _04257 MPMX20_04258: MPMX20_04258 - Phosphoribulokinase, plasmid, at 4,440,351 to 4,441,220 _04258 MPMX20_04259: MPMX20_04259 - Protein YhfA, at 4,441,287 to 4,441,691 _04259 Position (kb) 4440 4441Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 4439.175 kb on + strandat 4439.178 kb on - strandat 4439.205 kb on + strand, within MPMX20_04256at 4439.206 kb on + strand, within MPMX20_04256at 4439.233 kb on - strand, within MPMX20_04256at 4439.265 kb on + strand, within MPMX20_04256at 4439.336 kb on - strand, within MPMX20_04256at 4439.351 kb on + strand, within MPMX20_04256at 4439.353 kb on - strand, within MPMX20_04256at 4439.372 kb on - strand, within MPMX20_04256at 4439.525 kb on - strand, within MPMX20_04256at 4439.530 kb on + strand, within MPMX20_04256at 4439.530 kb on + strand, within MPMX20_04256at 4439.538 kb on - strand, within MPMX20_04256at 4439.538 kb on - strand, within MPMX20_04256at 4439.552 kb on + strand, within MPMX20_04256at 4439.651 kb on - strand, within MPMX20_04256at 4439.679 kb on + strand, within MPMX20_04256at 4439.684 kb on + strand, within MPMX20_04256at 4439.727 kb on + strand, within MPMX20_04256at 4439.849 kb on + strand, within MPMX20_04256at 4439.853 kb on - strand, within MPMX20_04256at 4439.859 kb on + strand, within MPMX20_04256at 4439.867 kb on - strand, within MPMX20_04256at 4439.867 kb on - strand, within MPMX20_04256at 4439.867 kb on - strand, within MPMX20_04256at 4439.867 kb on - strand, within MPMX20_04256at 4439.867 kb on - strand, within MPMX20_04256at 4439.872 kb on - strand, within MPMX20_04256at 4439.888 kb on - strand, within MPMX20_04256at 4439.888 kb on - strand, within MPMX20_04256at 4439.943 kb on + strand, within MPMX20_04256at 4439.943 kb on + strand, within MPMX20_04256at 4439.955 kb on - strand, within MPMX20_04256at 4439.995 kb on + strand, within MPMX20_04256at 4440.023 kb on - strandat 4440.028 kb on + strandat 4440.074 kb on + strandat 4440.075 kb on + strandat 4440.082 kb on - strandat 4440.082 kb on - strandat 4440.122 kb on + strandat 4440.135 kb on - strand, within MPMX20_04257at 4440.135 kb on - strand, within MPMX20_04257at 4440.165 kb on - strand, within MPMX20_04257at 4440.175 kb on + strand, within MPMX20_04257at 4440.202 kb on + strand, within MPMX20_04257at 4440.223 kb on - strand, within MPMX20_04257at 4440.255 kb on + strand, within MPMX20_04257at 4440.260 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.265 kb on + strand, within MPMX20_04257at 4440.268 kb on - strand, within MPMX20_04257at 4440.273 kb on - strand, within MPMX20_04257at 4440.329 kb on - strandat 4440.384 kb on + strandat 4440.464 kb on + strand, within MPMX20_04258at 4440.514 kb on - strand, within MPMX20_04258at 4440.536 kb on + strand, within MPMX20_04258at 4440.536 kb on + strand, within MPMX20_04258at 4440.582 kb on - strand, within MPMX20_04258at 4440.647 kb on + strand, within MPMX20_04258at 4440.688 kb on + strand, within MPMX20_04258at 4440.696 kb on - strand, within MPMX20_04258at 4440.696 kb on - strand, within MPMX20_04258at 4440.696 kb on - strand, within MPMX20_04258at 4440.741 kb on + strand, within MPMX20_04258at 4440.741 kb on + strand, within MPMX20_04258at 4440.741 kb on + strand, within MPMX20_04258at 4440.741 kb on + strand, within MPMX20_04258at 4440.835 kb on + strand, within MPMX20_04258at 4440.915 kb on - strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.988 kb on + strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4440.996 kb on - strand, within MPMX20_04258at 4441.041 kb on - strand, within MPMX20_04258at 4441.075 kb on + strand, within MPMX20_04258at 4441.102 kb on - strand, within MPMX20_04258at 4441.134 kb on - strandat 4441.221 kb on + strandat 4441.243 kb on - strandat 4441.245 kb on + strandat 4441.248 kb on - strandat 4441.255 kb on - strandat 4441.255 kb on - strandat 4441.259 kb on + strandat 4441.267 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030
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4,439,175 + +0.0
4,439,178 - +0.4
4,439,205 + MPMX20_04256 0.12 +0.2
4,439,206 + MPMX20_04256 0.12 -0.1
4,439,233 - MPMX20_04256 0.15 -1.0
4,439,265 + MPMX20_04256 0.18 -1.0
4,439,336 - MPMX20_04256 0.25 +2.2
4,439,351 + MPMX20_04256 0.26 -0.3
4,439,353 - MPMX20_04256 0.26 -0.1
4,439,372 - MPMX20_04256 0.28 -0.2
4,439,525 - MPMX20_04256 0.43 -0.1
4,439,530 + MPMX20_04256 0.44 -0.4
4,439,530 + MPMX20_04256 0.44 -0.5
4,439,538 - MPMX20_04256 0.44 -1.2
4,439,538 - MPMX20_04256 0.44 -0.2
4,439,552 + MPMX20_04256 0.46 +0.5
4,439,651 - MPMX20_04256 0.56 -1.6
4,439,679 + MPMX20_04256 0.58 -0.5
4,439,684 + MPMX20_04256 0.59 -0.8
4,439,727 + MPMX20_04256 0.63 -0.3
4,439,849 + MPMX20_04256 0.75 +0.5
4,439,853 - MPMX20_04256 0.75 -0.8
4,439,859 + MPMX20_04256 0.76 -0.9
4,439,867 - MPMX20_04256 0.77 -2.6
4,439,867 - MPMX20_04256 0.77 -2.0
4,439,867 - MPMX20_04256 0.77 -0.5
4,439,867 - MPMX20_04256 0.77 -0.9
4,439,867 - MPMX20_04256 0.77 +0.6
4,439,872 - MPMX20_04256 0.77 +0.1
4,439,888 - MPMX20_04256 0.79 +0.1
4,439,888 - MPMX20_04256 0.79 +0.2
4,439,943 + MPMX20_04256 0.84 -0.8
4,439,943 + MPMX20_04256 0.84 +0.4
4,439,955 - MPMX20_04256 0.85 +0.2
4,439,995 + MPMX20_04256 0.89 -1.1
4,440,023 - +0.6
4,440,028 + -0.5
4,440,074 + -1.0
4,440,075 + -0.8
4,440,082 - -0.9
4,440,082 - -0.8
4,440,122 + +0.6
4,440,135 - MPMX20_04257 0.15 -2.2
4,440,135 - MPMX20_04257 0.15 -0.5
4,440,165 - MPMX20_04257 0.29 -0.1
4,440,175 + MPMX20_04257 0.33 +1.6
4,440,202 + MPMX20_04257 0.46 +4.3
4,440,223 - MPMX20_04257 0.55 +1.5
4,440,255 + MPMX20_04257 0.70 +0.5
4,440,260 + MPMX20_04257 0.72 -1.0
4,440,265 + MPMX20_04257 0.74 +0.5
4,440,265 + MPMX20_04257 0.74 -0.3
4,440,265 + MPMX20_04257 0.74 -1.0
4,440,265 + MPMX20_04257 0.74 +1.2
4,440,265 + MPMX20_04257 0.74 +0.5
4,440,265 + MPMX20_04257 0.74 -0.3
4,440,265 + MPMX20_04257 0.74 -0.8
4,440,268 - MPMX20_04257 0.76 +1.2
4,440,273 - MPMX20_04257 0.78 -0.6
4,440,329 - -1.2
4,440,384 + -0.3
4,440,464 + MPMX20_04258 0.13 +0.6
4,440,514 - MPMX20_04258 0.19 -0.4
4,440,536 + MPMX20_04258 0.21 -0.5
4,440,536 + MPMX20_04258 0.21 -0.0
4,440,582 - MPMX20_04258 0.27 -1.9
4,440,647 + MPMX20_04258 0.34 -1.2
4,440,688 + MPMX20_04258 0.39 +0.1
4,440,696 - MPMX20_04258 0.40 -0.9
4,440,696 - MPMX20_04258 0.40 +1.2
4,440,696 - MPMX20_04258 0.40 -0.9
4,440,741 + MPMX20_04258 0.45 +0.7
4,440,741 + MPMX20_04258 0.45 -0.0
4,440,741 + MPMX20_04258 0.45 -0.1
4,440,741 + MPMX20_04258 0.45 -0.3
4,440,835 + MPMX20_04258 0.56 +1.1
4,440,915 - MPMX20_04258 0.65 -1.5
4,440,988 + MPMX20_04258 0.73 -0.0
4,440,988 + MPMX20_04258 0.73 -0.1
4,440,988 + MPMX20_04258 0.73 +1.2
4,440,988 + MPMX20_04258 0.73 +0.1
4,440,988 + MPMX20_04258 0.73 -0.1
4,440,988 + MPMX20_04258 0.73 +0.3
4,440,988 + MPMX20_04258 0.73 +5.1
4,440,988 + MPMX20_04258 0.73 -1.2
4,440,988 + MPMX20_04258 0.73 +0.2
4,440,988 + MPMX20_04258 0.73 -0.6
4,440,988 + MPMX20_04258 0.73 -0.8
4,440,988 + MPMX20_04258 0.73 -1.7
4,440,988 + MPMX20_04258 0.73 +1.0
4,440,988 + MPMX20_04258 0.73 -2.4
4,440,988 + MPMX20_04258 0.73 -0.2
4,440,988 + MPMX20_04258 0.73 +0.6
4,440,988 + MPMX20_04258 0.73 -0.1
4,440,988 + MPMX20_04258 0.73 -0.4
4,440,988 + MPMX20_04258 0.73 -0.3
4,440,988 + MPMX20_04258 0.73 +0.0
4,440,988 + MPMX20_04258 0.73 -0.8
4,440,988 + MPMX20_04258 0.73 -0.1
4,440,988 + MPMX20_04258 0.73 -0.5
4,440,988 + MPMX20_04258 0.73 +1.7
4,440,988 + MPMX20_04258 0.73 -2.1
4,440,988 + MPMX20_04258 0.73 -0.7
4,440,988 + MPMX20_04258 0.73 +0.7
4,440,988 + MPMX20_04258 0.73 +0.1
4,440,988 + MPMX20_04258 0.73 +0.4
4,440,996 - MPMX20_04258 0.74 -0.8
4,440,996 - MPMX20_04258 0.74 +0.0
4,440,996 - MPMX20_04258 0.74 +1.4
4,440,996 - MPMX20_04258 0.74 +0.4
4,440,996 - MPMX20_04258 0.74 -0.8
4,440,996 - MPMX20_04258 0.74 -0.3
4,440,996 - MPMX20_04258 0.74 -0.7
4,440,996 - MPMX20_04258 0.74 -0.6
4,440,996 - MPMX20_04258 0.74 -1.1
4,440,996 - MPMX20_04258 0.74 -1.3
4,440,996 - MPMX20_04258 0.74 +1.6
4,440,996 - MPMX20_04258 0.74 -0.9
4,440,996 - MPMX20_04258 0.74 -1.3
4,440,996 - MPMX20_04258 0.74 +0.2
4,440,996 - MPMX20_04258 0.74 -0.7
4,440,996 - MPMX20_04258 0.74 -0.9
4,440,996 - MPMX20_04258 0.74 -1.3
4,441,041 - MPMX20_04258 0.79 +1.2
4,441,075 + MPMX20_04258 0.83 +0.1
4,441,102 - MPMX20_04258 0.86 +0.0
4,441,134 - -0.2
4,441,221 + +0.2
4,441,243 - +0.1
4,441,245 + +0.3
4,441,248 - -0.4
4,441,255 - -0.9
4,441,255 - +0.2
4,441,259 + +0.1
4,441,267 - +0.1

Or see this region's nucleotide sequence