Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04134

Experiment: M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04132 and MPMX20_04133 overlap by 1 nucleotidesMPMX20_04133 and MPMX20_04134 are separated by 312 nucleotidesMPMX20_04134 and MPMX20_04135 are separated by 15 nucleotidesMPMX20_04135 and MPMX20_04136 are separated by 289 nucleotides MPMX20_04132: MPMX20_04132 - Stringent starvation protein B, at 4,333,393 to 4,333,890 _04132 MPMX20_04133: MPMX20_04133 - Stringent starvation protein A, at 4,333,890 to 4,334,528 _04133 MPMX20_04134: MPMX20_04134 - 30S ribosomal protein S9, at 4,334,841 to 4,335,233 _04134 MPMX20_04135: MPMX20_04135 - 50S ribosomal protein L13, at 4,335,249 to 4,335,677 _04135 MPMX20_04136: MPMX20_04136 - Cell division protein ZapE, at 4,335,967 to 4,337,091 _04136 Position (kb) 4334 4335 4336Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4333.869 kb on + strandat 4333.933 kb on - strandat 4333.934 kb on - strandat 4334.018 kb on + strand, within MPMX20_04133at 4334.025 kb on - strand, within MPMX20_04133at 4334.029 kb on + strand, within MPMX20_04133at 4334.029 kb on + strand, within MPMX20_04133at 4334.062 kb on + strand, within MPMX20_04133at 4334.190 kb on - strand, within MPMX20_04133at 4334.268 kb on - strand, within MPMX20_04133at 4334.296 kb on - strand, within MPMX20_04133at 4334.363 kb on - strand, within MPMX20_04133at 4334.449 kb on + strand, within MPMX20_04133at 4334.457 kb on - strand, within MPMX20_04133at 4334.457 kb on - strand, within MPMX20_04133at 4334.575 kb on - strandat 4334.585 kb on - strandat 4334.699 kb on + strandat 4334.699 kb on + strandat 4334.699 kb on + strandat 4334.707 kb on - strandat 4334.707 kb on - strandat 4335.926 kb on + strandat 4335.931 kb on + strandat 4335.938 kb on + strandat 4335.950 kb on - strandat 4335.960 kb on - strandat 4335.960 kb on - strandat 4335.984 kb on + strandat 4335.984 kb on + strandat 4336.058 kb on + strandat 4336.058 kb on + strandat 4336.058 kb on + strandat 4336.058 kb on + strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.072 kb on + strandat 4336.101 kb on + strand, within MPMX20_04136at 4336.165 kb on - strand, within MPMX20_04136at 4336.167 kb on - strand, within MPMX20_04136at 4336.192 kb on - strand, within MPMX20_04136at 4336.194 kb on + strand, within MPMX20_04136

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030
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4,333,869 + -0.3
4,333,933 - -1.0
4,333,934 - +0.2
4,334,018 + MPMX20_04133 0.20 -3.7
4,334,025 - MPMX20_04133 0.21 -1.3
4,334,029 + MPMX20_04133 0.22 -3.3
4,334,029 + MPMX20_04133 0.22 -3.6
4,334,062 + MPMX20_04133 0.27 -2.7
4,334,190 - MPMX20_04133 0.47 -2.9
4,334,268 - MPMX20_04133 0.59 -1.0
4,334,296 - MPMX20_04133 0.64 +1.2
4,334,363 - MPMX20_04133 0.74 -1.4
4,334,449 + MPMX20_04133 0.87 -2.0
4,334,457 - MPMX20_04133 0.89 -1.7
4,334,457 - MPMX20_04133 0.89 +0.6
4,334,575 - +1.2
4,334,585 - -0.5
4,334,699 + -0.2
4,334,699 + +0.2
4,334,699 + -0.4
4,334,707 - +0.2
4,334,707 - +1.8
4,335,926 + +1.6
4,335,931 + +0.7
4,335,938 + -0.3
4,335,950 - +2.2
4,335,960 - +0.4
4,335,960 - +0.4
4,335,984 + +0.2
4,335,984 + -0.2
4,336,058 + -0.4
4,336,058 + -2.1
4,336,058 + -1.1
4,336,058 + -0.0
4,336,066 - +0.5
4,336,066 - -1.2
4,336,066 - -0.4
4,336,066 - -0.6
4,336,066 - +1.2
4,336,066 - -1.2
4,336,066 - -0.8
4,336,072 + -1.3
4,336,101 + MPMX20_04136 0.12 +0.7
4,336,165 - MPMX20_04136 0.18 -0.8
4,336,167 - MPMX20_04136 0.18 -1.3
4,336,192 - MPMX20_04136 0.20 +0.6
4,336,194 + MPMX20_04136 0.20 -1.5

Or see this region's nucleotide sequence