Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03166

Experiment: M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03165 and MPMX20_03166 are separated by 136 nucleotidesMPMX20_03166 and MPMX20_03167 are separated by 209 nucleotidesMPMX20_03167 and MPMX20_03168 are separated by 93 nucleotides MPMX20_03165: MPMX20_03165 - putative MFS-type transporter YfcJ, at 3,323,518 to 3,324,705 _03165 MPMX20_03166: MPMX20_03166 - hypothetical protein, at 3,324,842 to 3,325,102 _03166 MPMX20_03167: MPMX20_03167 - Ecotin, at 3,325,312 to 3,325,815 _03167 MPMX20_03168: MPMX20_03168 - Malate:quinone oxidoreductase, at 3,325,909 to 3,327,561 _03168 Position (kb) 3324 3325 3326Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3323.868 kb on + strand, within MPMX20_03165at 3323.869 kb on + strand, within MPMX20_03165at 3323.869 kb on + strand, within MPMX20_03165at 3323.871 kb on - strand, within MPMX20_03165at 3323.877 kb on - strand, within MPMX20_03165at 3323.910 kb on - strand, within MPMX20_03165at 3323.933 kb on + strand, within MPMX20_03165at 3323.953 kb on + strand, within MPMX20_03165at 3323.961 kb on - strand, within MPMX20_03165at 3324.115 kb on + strand, within MPMX20_03165at 3324.121 kb on - strand, within MPMX20_03165at 3324.145 kb on - strand, within MPMX20_03165at 3324.169 kb on + strand, within MPMX20_03165at 3324.169 kb on + strand, within MPMX20_03165at 3324.169 kb on + strand, within MPMX20_03165at 3324.177 kb on - strand, within MPMX20_03165at 3324.177 kb on - strand, within MPMX20_03165at 3324.177 kb on - strand, within MPMX20_03165at 3324.216 kb on + strand, within MPMX20_03165at 3324.224 kb on - strand, within MPMX20_03165at 3324.224 kb on - strand, within MPMX20_03165at 3324.224 kb on - strand, within MPMX20_03165at 3324.224 kb on - strand, within MPMX20_03165at 3324.229 kb on + strand, within MPMX20_03165at 3324.334 kb on + strand, within MPMX20_03165at 3324.382 kb on + strand, within MPMX20_03165at 3324.449 kb on - strand, within MPMX20_03165at 3324.464 kb on + strand, within MPMX20_03165at 3324.472 kb on - strand, within MPMX20_03165at 3324.472 kb on - strand, within MPMX20_03165at 3324.472 kb on - strand, within MPMX20_03165at 3324.480 kb on + strand, within MPMX20_03165at 3324.570 kb on + strand, within MPMX20_03165at 3324.597 kb on + strandat 3324.656 kb on + strandat 3324.656 kb on + strandat 3324.656 kb on + strandat 3324.659 kb on - strandat 3324.659 kb on - strandat 3324.672 kb on + strandat 3324.672 kb on + strandat 3324.695 kb on - strandat 3324.695 kb on - strandat 3324.706 kb on + strandat 3324.748 kb on - strandat 3324.752 kb on + strandat 3324.863 kb on - strandat 3324.880 kb on + strand, within MPMX20_03166at 3324.908 kb on - strand, within MPMX20_03166at 3324.972 kb on + strand, within MPMX20_03166at 3324.975 kb on + strand, within MPMX20_03166at 3324.975 kb on + strand, within MPMX20_03166at 3324.978 kb on - strand, within MPMX20_03166at 3324.983 kb on - strand, within MPMX20_03166at 3324.983 kb on - strand, within MPMX20_03166at 3324.983 kb on - strand, within MPMX20_03166at 3325.002 kb on - strand, within MPMX20_03166at 3325.070 kb on + strand, within MPMX20_03166at 3325.072 kb on + strand, within MPMX20_03166at 3325.072 kb on + strand, within MPMX20_03166at 3325.072 kb on + strand, within MPMX20_03166at 3325.072 kb on + strand, within MPMX20_03166at 3325.072 kb on + strand, within MPMX20_03166at 3325.078 kb on - strandat 3325.078 kb on - strandat 3325.122 kb on - strandat 3325.130 kb on + strandat 3325.169 kb on + strandat 3325.177 kb on - strandat 3325.179 kb on + strandat 3325.219 kb on - strandat 3325.267 kb on + strandat 3325.285 kb on - strandat 3325.289 kb on - strandat 3325.388 kb on + strand, within MPMX20_03167at 3325.388 kb on + strand, within MPMX20_03167at 3325.395 kb on + strand, within MPMX20_03167at 3325.396 kb on - strand, within MPMX20_03167at 3325.396 kb on - strand, within MPMX20_03167at 3325.396 kb on - strand, within MPMX20_03167at 3325.397 kb on - strand, within MPMX20_03167at 3325.454 kb on + strand, within MPMX20_03167at 3325.472 kb on - strand, within MPMX20_03167at 3325.482 kb on - strand, within MPMX20_03167at 3325.520 kb on + strand, within MPMX20_03167at 3325.545 kb on - strand, within MPMX20_03167at 3325.582 kb on + strand, within MPMX20_03167at 3325.582 kb on + strand, within MPMX20_03167at 3325.646 kb on + strand, within MPMX20_03167at 3325.654 kb on - strand, within MPMX20_03167at 3325.710 kb on - strand, within MPMX20_03167at 3325.759 kb on + strand, within MPMX20_03167at 3325.807 kb on - strandat 3325.824 kb on - strandat 3325.837 kb on + strandat 3325.884 kb on - strandat 3325.949 kb on + strandat 3325.969 kb on - strandat 3326.062 kb on + strandat 3326.062 kb on + strandat 3326.067 kb on + strandat 3326.067 kb on + strandat 3326.067 kb on + strandat 3326.075 kb on - strand, within MPMX20_03168at 3326.093 kb on - strand, within MPMX20_03168

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030
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3,323,868 + MPMX20_03165 0.29 -1.1
3,323,869 + MPMX20_03165 0.30 +0.1
3,323,869 + MPMX20_03165 0.30 -0.2
3,323,871 - MPMX20_03165 0.30 +0.4
3,323,877 - MPMX20_03165 0.30 -0.1
3,323,910 - MPMX20_03165 0.33 +3.4
3,323,933 + MPMX20_03165 0.35 +0.8
3,323,953 + MPMX20_03165 0.37 +0.8
3,323,961 - MPMX20_03165 0.37 +0.4
3,324,115 + MPMX20_03165 0.50 +0.7
3,324,121 - MPMX20_03165 0.51 +0.6
3,324,145 - MPMX20_03165 0.53 +0.4
3,324,169 + MPMX20_03165 0.55 -0.5
3,324,169 + MPMX20_03165 0.55 +0.6
3,324,169 + MPMX20_03165 0.55 -1.5
3,324,177 - MPMX20_03165 0.55 -0.5
3,324,177 - MPMX20_03165 0.55 -1.2
3,324,177 - MPMX20_03165 0.55 -0.1
3,324,216 + MPMX20_03165 0.59 +1.8
3,324,224 - MPMX20_03165 0.59 +1.2
3,324,224 - MPMX20_03165 0.59 +0.8
3,324,224 - MPMX20_03165 0.59 +2.0
3,324,224 - MPMX20_03165 0.59 +0.1
3,324,229 + MPMX20_03165 0.60 -1.4
3,324,334 + MPMX20_03165 0.69 -0.0
3,324,382 + MPMX20_03165 0.73 -0.3
3,324,449 - MPMX20_03165 0.78 -0.8
3,324,464 + MPMX20_03165 0.80 +0.1
3,324,472 - MPMX20_03165 0.80 -0.4
3,324,472 - MPMX20_03165 0.80 -0.9
3,324,472 - MPMX20_03165 0.80 +0.5
3,324,480 + MPMX20_03165 0.81 +0.3
3,324,570 + MPMX20_03165 0.89 -0.4
3,324,597 + -1.9
3,324,656 + -1.4
3,324,656 + -2.1
3,324,656 + -1.9
3,324,659 - +1.0
3,324,659 - -0.9
3,324,672 + -0.5
3,324,672 + -0.6
3,324,695 - +1.1
3,324,695 - -0.2
3,324,706 + -1.3
3,324,748 - +0.7
3,324,752 + -0.1
3,324,863 - -0.6
3,324,880 + MPMX20_03166 0.15 -0.6
3,324,908 - MPMX20_03166 0.25 -1.3
3,324,972 + MPMX20_03166 0.50 -0.9
3,324,975 + MPMX20_03166 0.51 -1.1
3,324,975 + MPMX20_03166 0.51 +1.0
3,324,978 - MPMX20_03166 0.52 -0.5
3,324,983 - MPMX20_03166 0.54 -0.8
3,324,983 - MPMX20_03166 0.54 -0.1
3,324,983 - MPMX20_03166 0.54 -1.9
3,325,002 - MPMX20_03166 0.61 -1.6
3,325,070 + MPMX20_03166 0.87 +0.1
3,325,072 + MPMX20_03166 0.88 -2.0
3,325,072 + MPMX20_03166 0.88 -2.1
3,325,072 + MPMX20_03166 0.88 -0.9
3,325,072 + MPMX20_03166 0.88 +2.8
3,325,072 + MPMX20_03166 0.88 -0.5
3,325,078 - -1.1
3,325,078 - -2.6
3,325,122 - +0.8
3,325,130 + +0.4
3,325,169 + -0.9
3,325,177 - -0.1
3,325,179 + -0.9
3,325,219 - -0.1
3,325,267 + -3.2
3,325,285 - -0.4
3,325,289 - -1.1
3,325,388 + MPMX20_03167 0.15 -1.3
3,325,388 + MPMX20_03167 0.15 -2.2
3,325,395 + MPMX20_03167 0.16 -0.5
3,325,396 - MPMX20_03167 0.17 -0.0
3,325,396 - MPMX20_03167 0.17 +1.0
3,325,396 - MPMX20_03167 0.17 -0.6
3,325,397 - MPMX20_03167 0.17 +0.3
3,325,454 + MPMX20_03167 0.28 -1.2
3,325,472 - MPMX20_03167 0.32 -2.2
3,325,482 - MPMX20_03167 0.34 -2.5
3,325,520 + MPMX20_03167 0.41 +0.7
3,325,545 - MPMX20_03167 0.46 -1.6
3,325,582 + MPMX20_03167 0.54 +0.0
3,325,582 + MPMX20_03167 0.54 -0.8
3,325,646 + MPMX20_03167 0.66 -1.0
3,325,654 - MPMX20_03167 0.68 -1.2
3,325,710 - MPMX20_03167 0.79 -0.5
3,325,759 + MPMX20_03167 0.89 +1.0
3,325,807 - -2.4
3,325,824 - +1.4
3,325,837 + +2.6
3,325,884 - -0.9
3,325,949 + +1.2
3,325,969 - +0.3
3,326,062 + -0.8
3,326,062 + +1.3
3,326,067 + +0.1
3,326,067 + -0.2
3,326,067 + -0.1
3,326,075 - MPMX20_03168 0.10 -0.7
3,326,093 - MPMX20_03168 0.11 -0.6

Or see this region's nucleotide sequence