Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02470

Experiment: 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02468 and MPMX20_02469 are separated by 185 nucleotidesMPMX20_02469 and MPMX20_02470 are separated by 12 nucleotidesMPMX20_02470 and MPMX20_02471 overlap by 1 nucleotidesMPMX20_02471 and MPMX20_02472 are separated by 54 nucleotides MPMX20_02468: MPMX20_02468 - Glucosylglycerate phosphorylase, at 2,609,323 to 2,611,020 _02468 MPMX20_02469: MPMX20_02469 - Phage shock protein D, at 2,611,206 to 2,611,430 _02469 MPMX20_02470: MPMX20_02470 - Phage shock protein C, at 2,611,443 to 2,611,802 _02470 MPMX20_02471: MPMX20_02471 - Phage shock protein B, at 2,611,802 to 2,612,026 _02471 MPMX20_02472: MPMX20_02472 - Phage shock protein A, at 2,612,081 to 2,612,749 _02472 Position (kb) 2611 2612Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2610.444 kb on + strand, within MPMX20_02468at 2610.444 kb on + strand, within MPMX20_02468at 2610.447 kb on + strand, within MPMX20_02468at 2610.462 kb on + strand, within MPMX20_02468at 2610.463 kb on - strand, within MPMX20_02468at 2610.467 kb on + strand, within MPMX20_02468at 2610.467 kb on + strand, within MPMX20_02468at 2610.468 kb on + strand, within MPMX20_02468at 2610.468 kb on + strand, within MPMX20_02468at 2610.476 kb on + strand, within MPMX20_02468at 2610.477 kb on + strand, within MPMX20_02468at 2610.477 kb on + strand, within MPMX20_02468at 2610.477 kb on + strand, within MPMX20_02468at 2610.477 kb on + strand, within MPMX20_02468at 2610.484 kb on - strand, within MPMX20_02468at 2610.486 kb on + strand, within MPMX20_02468at 2610.486 kb on + strand, within MPMX20_02468at 2610.487 kb on + strand, within MPMX20_02468at 2610.487 kb on + strand, within MPMX20_02468at 2610.494 kb on + strand, within MPMX20_02468at 2610.494 kb on + strand, within MPMX20_02468at 2610.501 kb on + strand, within MPMX20_02468at 2610.501 kb on + strand, within MPMX20_02468at 2610.502 kb on - strand, within MPMX20_02468at 2610.505 kb on + strand, within MPMX20_02468at 2610.512 kb on + strand, within MPMX20_02468at 2610.519 kb on + strand, within MPMX20_02468at 2610.524 kb on + strand, within MPMX20_02468at 2610.524 kb on + strand, within MPMX20_02468at 2610.534 kb on + strand, within MPMX20_02468at 2610.544 kb on + strand, within MPMX20_02468at 2610.551 kb on + strand, within MPMX20_02468at 2610.551 kb on + strand, within MPMX20_02468at 2610.559 kb on + strand, within MPMX20_02468at 2610.570 kb on + strand, within MPMX20_02468at 2610.570 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.589 kb on + strand, within MPMX20_02468at 2610.595 kb on + strand, within MPMX20_02468at 2610.600 kb on + strand, within MPMX20_02468at 2610.602 kb on + strand, within MPMX20_02468at 2610.607 kb on + strand, within MPMX20_02468at 2610.664 kb on + strand, within MPMX20_02468at 2610.666 kb on + strand, within MPMX20_02468at 2610.672 kb on - strand, within MPMX20_02468at 2610.687 kb on + strand, within MPMX20_02468at 2610.723 kb on + strand, within MPMX20_02468at 2610.770 kb on + strand, within MPMX20_02468at 2611.043 kb on + strandat 2611.051 kb on - strandat 2611.051 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.104 kb on - strandat 2611.111 kb on + strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.114 kb on - strandat 2611.119 kb on - strandat 2611.119 kb on - strandat 2611.124 kb on - strandat 2611.124 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.126 kb on - strandat 2611.150 kb on - strandat 2611.163 kb on - strandat 2611.169 kb on - strandat 2611.169 kb on - strandat 2611.169 kb on - strandat 2611.169 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.174 kb on - strandat 2611.187 kb on + strandat 2611.188 kb on + strandat 2611.188 kb on + strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.195 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.196 kb on - strandat 2611.219 kb on - strandat 2611.224 kb on - strandat 2611.259 kb on - strand, within MPMX20_02469at 2611.266 kb on - strand, within MPMX20_02469at 2611.266 kb on - strand, within MPMX20_02469at 2611.273 kb on + strand, within MPMX20_02469at 2611.285 kb on - strand, within MPMX20_02469at 2611.285 kb on - strand, within MPMX20_02469at 2611.309 kb on + strand, within MPMX20_02469at 2611.309 kb on - strand, within MPMX20_02469at 2611.352 kb on - strand, within MPMX20_02469at 2611.357 kb on + strand, within MPMX20_02469at 2611.359 kb on - strand, within MPMX20_02469at 2611.369 kb on - strand, within MPMX20_02469at 2611.373 kb on - strand, within MPMX20_02469at 2611.397 kb on - strand, within MPMX20_02469at 2611.398 kb on - strand, within MPMX20_02469at 2611.398 kb on - strand, within MPMX20_02469at 2611.419 kb on + strandat 2611.440 kb on + strandat 2611.469 kb on + strandat 2611.469 kb on + strandat 2611.477 kb on - strandat 2611.486 kb on - strand, within MPMX20_02470at 2611.515 kb on + strand, within MPMX20_02470at 2611.520 kb on + strand, within MPMX20_02470at 2611.523 kb on - strand, within MPMX20_02470at 2611.564 kb on - strand, within MPMX20_02470at 2611.630 kb on + strand, within MPMX20_02470at 2611.673 kb on + strand, within MPMX20_02470at 2611.679 kb on + strand, within MPMX20_02470at 2611.687 kb on - strand, within MPMX20_02470at 2611.715 kb on + strand, within MPMX20_02470at 2611.727 kb on + strand, within MPMX20_02470at 2611.727 kb on + strand, within MPMX20_02470at 2611.727 kb on + strand, within MPMX20_02470at 2611.727 kb on + strand, within MPMX20_02470at 2611.735 kb on - strand, within MPMX20_02470at 2611.735 kb on - strand, within MPMX20_02470at 2611.755 kb on + strand, within MPMX20_02470at 2611.787 kb on + strandat 2611.891 kb on + strand, within MPMX20_02471at 2611.894 kb on + strand, within MPMX20_02471at 2611.899 kb on - strand, within MPMX20_02471at 2611.914 kb on - strand, within MPMX20_02471at 2611.940 kb on - strand, within MPMX20_02471at 2611.947 kb on + strand, within MPMX20_02471at 2612.024 kb on + strandat 2612.026 kb on + strandat 2612.034 kb on - strandat 2612.038 kb on + strandat 2612.040 kb on + strandat 2612.046 kb on - strandat 2612.154 kb on - strand, within MPMX20_02472at 2612.164 kb on + strand, within MPMX20_02472at 2612.206 kb on - strand, within MPMX20_02472at 2612.241 kb on - strand, within MPMX20_02472at 2612.269 kb on + strand, within MPMX20_02472at 2612.269 kb on + strand, within MPMX20_02472at 2612.484 kb on + strand, within MPMX20_02472at 2612.484 kb on + strand, within MPMX20_02472at 2612.492 kb on - strand, within MPMX20_02472at 2612.513 kb on - strand, within MPMX20_02472at 2612.549 kb on - strand, within MPMX20_02472at 2612.558 kb on + strand, within MPMX20_02472at 2612.561 kb on - strand, within MPMX20_02472at 2612.563 kb on + strand, within MPMX20_02472at 2612.571 kb on - strand, within MPMX20_02472at 2612.698 kb on - strandat 2612.698 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030
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2,610,444 + MPMX20_02468 0.66 -1.4
2,610,444 + MPMX20_02468 0.66 -1.0
2,610,447 + MPMX20_02468 0.66 -2.2
2,610,462 + MPMX20_02468 0.67 -1.1
2,610,463 - MPMX20_02468 0.67 +1.5
2,610,467 + MPMX20_02468 0.67 -1.4
2,610,467 + MPMX20_02468 0.67 -0.1
2,610,468 + MPMX20_02468 0.67 -0.2
2,610,468 + MPMX20_02468 0.67 +0.4
2,610,476 + MPMX20_02468 0.68 -1.4
2,610,477 + MPMX20_02468 0.68 -0.2
2,610,477 + MPMX20_02468 0.68 -0.1
2,610,477 + MPMX20_02468 0.68 -0.7
2,610,477 + MPMX20_02468 0.68 +0.3
2,610,484 - MPMX20_02468 0.68 -1.5
2,610,486 + MPMX20_02468 0.68 +0.4
2,610,486 + MPMX20_02468 0.68 +0.2
2,610,487 + MPMX20_02468 0.69 -1.2
2,610,487 + MPMX20_02468 0.69 -0.4
2,610,494 + MPMX20_02468 0.69 +1.0
2,610,494 + MPMX20_02468 0.69 +0.9
2,610,501 + MPMX20_02468 0.69 -0.1
2,610,501 + MPMX20_02468 0.69 -2.5
2,610,502 - MPMX20_02468 0.69 -2.8
2,610,505 + MPMX20_02468 0.70 -1.0
2,610,512 + MPMX20_02468 0.70 -0.4
2,610,519 + MPMX20_02468 0.70 -1.6
2,610,524 + MPMX20_02468 0.71 -0.5
2,610,524 + MPMX20_02468 0.71 -0.9
2,610,534 + MPMX20_02468 0.71 +0.3
2,610,544 + MPMX20_02468 0.72 +0.7
2,610,551 + MPMX20_02468 0.72 +0.4
2,610,551 + MPMX20_02468 0.72 -0.9
2,610,559 + MPMX20_02468 0.73 +0.7
2,610,570 + MPMX20_02468 0.73 +1.9
2,610,570 + MPMX20_02468 0.73 -0.5
2,610,589 + MPMX20_02468 0.75 -1.3
2,610,589 + MPMX20_02468 0.75 -1.5
2,610,589 + MPMX20_02468 0.75 +0.5
2,610,589 + MPMX20_02468 0.75 -0.2
2,610,589 + MPMX20_02468 0.75 -1.2
2,610,589 + MPMX20_02468 0.75 +0.9
2,610,589 + MPMX20_02468 0.75 +0.1
2,610,589 + MPMX20_02468 0.75 -0.3
2,610,589 + MPMX20_02468 0.75 +1.9
2,610,589 + MPMX20_02468 0.75 -1.6
2,610,589 + MPMX20_02468 0.75 -0.7
2,610,589 + MPMX20_02468 0.75 -1.3
2,610,595 + MPMX20_02468 0.75 -0.5
2,610,600 + MPMX20_02468 0.75 -0.6
2,610,602 + MPMX20_02468 0.75 +1.2
2,610,607 + MPMX20_02468 0.76 -1.0
2,610,664 + MPMX20_02468 0.79 +0.9
2,610,666 + MPMX20_02468 0.79 -0.1
2,610,672 - MPMX20_02468 0.79 -0.5
2,610,687 + MPMX20_02468 0.80 -0.8
2,610,723 + MPMX20_02468 0.82 +1.5
2,610,770 + MPMX20_02468 0.85 +1.2
2,611,043 + -0.3
2,611,051 - -0.7
2,611,051 - -1.5
2,611,104 - +0.0
2,611,104 - +0.6
2,611,104 - +0.9
2,611,104 - -0.6
2,611,104 - +0.9
2,611,104 - -0.6
2,611,104 - -0.8
2,611,104 - -0.6
2,611,104 - -0.3
2,611,104 - +2.9
2,611,104 - -1.1
2,611,111 + +0.5
2,611,114 - -0.8
2,611,114 - -0.1
2,611,114 - +0.6
2,611,114 - -1.4
2,611,114 - -0.3
2,611,114 - -0.5
2,611,114 - +0.9
2,611,114 - -0.5
2,611,114 - -0.2
2,611,114 - -2.8
2,611,114 - -1.1
2,611,114 - -0.3
2,611,114 - +0.9
2,611,114 - -0.6
2,611,114 - -1.8
2,611,114 - +0.4
2,611,114 - +0.4
2,611,119 - -0.3
2,611,119 - +0.5
2,611,124 - -0.1
2,611,124 - -0.5
2,611,126 - -0.5
2,611,126 - +0.5
2,611,126 - -0.2
2,611,126 - +1.2
2,611,126 - -0.8
2,611,126 - -0.0
2,611,126 - -0.5
2,611,126 - +1.0
2,611,126 - +0.4
2,611,126 - -0.8
2,611,126 - +0.0
2,611,126 - -1.0
2,611,126 - -2.0
2,611,126 - +0.9
2,611,126 - +0.6
2,611,126 - -0.9
2,611,126 - +1.4
2,611,126 - +0.2
2,611,126 - -0.8
2,611,126 - -0.3
2,611,126 - +0.7
2,611,126 - -0.9
2,611,126 - -0.5
2,611,126 - -0.2
2,611,126 - -0.2
2,611,126 - -0.7
2,611,126 - -0.8
2,611,126 - +0.3
2,611,126 - +4.2
2,611,126 - -0.8
2,611,126 - -2.2
2,611,126 - +1.0
2,611,126 - -0.7
2,611,126 - +1.2
2,611,126 - -0.1
2,611,126 - -0.4
2,611,126 - -0.6
2,611,150 - -0.3
2,611,163 - -2.2
2,611,169 - -1.2
2,611,169 - -0.9
2,611,169 - +0.7
2,611,169 - +0.1
2,611,174 - -0.3
2,611,174 - +0.3
2,611,174 - -0.0
2,611,174 - -0.4
2,611,174 - -0.6
2,611,174 - -0.6
2,611,174 - +2.5
2,611,174 - -1.4
2,611,187 + +0.7
2,611,188 + +0.5
2,611,188 + -1.0
2,611,195 - +0.0
2,611,195 - +0.3
2,611,195 - -0.0
2,611,195 - -1.0
2,611,195 - +0.7
2,611,195 - +0.3
2,611,195 - +0.1
2,611,195 - -0.5
2,611,195 - -0.8
2,611,195 - +0.5
2,611,195 - -0.6
2,611,195 - -0.7
2,611,195 - +0.6
2,611,195 - +0.3
2,611,195 - +0.8
2,611,195 - -1.2
2,611,195 - +0.9
2,611,195 - -1.2
2,611,195 - -0.0
2,611,195 - -0.0
2,611,195 - -0.1
2,611,195 - +0.7
2,611,195 - -0.5
2,611,196 - +0.9
2,611,196 - -0.4
2,611,196 - +0.4
2,611,196 - -0.2
2,611,196 - +1.3
2,611,196 - +0.0
2,611,196 - -0.4
2,611,196 - -1.8
2,611,196 - +0.9
2,611,196 - +0.1
2,611,196 - +0.1
2,611,219 - +0.1
2,611,224 - -0.9
2,611,259 - MPMX20_02469 0.24 +1.2
2,611,266 - MPMX20_02469 0.27 -0.5
2,611,266 - MPMX20_02469 0.27 -0.6
2,611,273 + MPMX20_02469 0.30 +2.3
2,611,285 - MPMX20_02469 0.35 -0.1
2,611,285 - MPMX20_02469 0.35 -0.7
2,611,309 + MPMX20_02469 0.46 +0.9
2,611,309 - MPMX20_02469 0.46 -1.2
2,611,352 - MPMX20_02469 0.65 +3.0
2,611,357 + MPMX20_02469 0.67 +0.2
2,611,359 - MPMX20_02469 0.68 -1.6
2,611,369 - MPMX20_02469 0.72 +0.2
2,611,373 - MPMX20_02469 0.74 +0.7
2,611,397 - MPMX20_02469 0.85 -0.6
2,611,398 - MPMX20_02469 0.85 -0.7
2,611,398 - MPMX20_02469 0.85 -0.5
2,611,419 + -0.0
2,611,440 + +0.2
2,611,469 + -0.8
2,611,469 + -1.2
2,611,477 - -0.8
2,611,486 - MPMX20_02470 0.12 -0.6
2,611,515 + MPMX20_02470 0.20 -0.3
2,611,520 + MPMX20_02470 0.21 +0.5
2,611,523 - MPMX20_02470 0.22 +0.2
2,611,564 - MPMX20_02470 0.34 -0.3
2,611,630 + MPMX20_02470 0.52 -1.0
2,611,673 + MPMX20_02470 0.64 -0.0
2,611,679 + MPMX20_02470 0.66 -1.0
2,611,687 - MPMX20_02470 0.68 -0.1
2,611,715 + MPMX20_02470 0.76 -0.5
2,611,727 + MPMX20_02470 0.79 +0.8
2,611,727 + MPMX20_02470 0.79 +0.2
2,611,727 + MPMX20_02470 0.79 -1.0
2,611,727 + MPMX20_02470 0.79 +0.6
2,611,735 - MPMX20_02470 0.81 -0.8
2,611,735 - MPMX20_02470 0.81 -0.8
2,611,755 + MPMX20_02470 0.87 -0.5
2,611,787 + -0.3
2,611,891 + MPMX20_02471 0.40 +0.1
2,611,894 + MPMX20_02471 0.41 +0.9
2,611,899 - MPMX20_02471 0.43 -1.3
2,611,914 - MPMX20_02471 0.50 -1.5
2,611,940 - MPMX20_02471 0.61 -1.1
2,611,947 + MPMX20_02471 0.64 -0.9
2,612,024 + -0.2
2,612,026 + -0.8
2,612,034 - -0.3
2,612,038 + -0.5
2,612,040 + +0.9
2,612,046 - -2.5
2,612,154 - MPMX20_02472 0.11 -0.8
2,612,164 + MPMX20_02472 0.12 -1.8
2,612,206 - MPMX20_02472 0.19 -0.8
2,612,241 - MPMX20_02472 0.24 -1.8
2,612,269 + MPMX20_02472 0.28 +0.2
2,612,269 + MPMX20_02472 0.28 -0.7
2,612,484 + MPMX20_02472 0.60 +1.5
2,612,484 + MPMX20_02472 0.60 -1.0
2,612,492 - MPMX20_02472 0.61 -2.1
2,612,513 - MPMX20_02472 0.65 -1.7
2,612,549 - MPMX20_02472 0.70 -1.0
2,612,558 + MPMX20_02472 0.71 +0.9
2,612,561 - MPMX20_02472 0.72 -1.4
2,612,563 + MPMX20_02472 0.72 -1.2
2,612,571 - MPMX20_02472 0.73 -1.3
2,612,698 - -1.8
2,612,698 - -1.6

Or see this region's nucleotide sequence