Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00675

Experiment: 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00674 and MPMX20_00675 are separated by 129 nucleotidesMPMX20_00675 and MPMX20_00676 are separated by 120 nucleotides MPMX20_00674: MPMX20_00674 - Osmotically-inducible protein Y, at 693,150 to 693,767 _00674 MPMX20_00675: MPMX20_00675 - hypothetical protein, at 693,897 to 694,058 _00675 MPMX20_00676: MPMX20_00676 - hypothetical protein, at 694,179 to 695,231 _00676 Position (kb) 693 694 695Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10 11at 692.985 kb on - strandat 692.992 kb on + strandat 693.004 kb on + strandat 693.004 kb on + strandat 693.004 kb on + strandat 693.004 kb on + strandat 693.006 kb on + strandat 693.006 kb on + strandat 693.006 kb on + strandat 693.012 kb on - strandat 693.012 kb on - strandat 693.014 kb on - strandat 693.014 kb on - strandat 693.014 kb on - strandat 693.014 kb on - strandat 693.014 kb on - strandat 693.035 kb on + strandat 693.035 kb on - strandat 693.047 kb on + strandat 693.055 kb on - strandat 693.055 kb on - strandat 693.122 kb on + strandat 693.127 kb on + strandat 693.129 kb on + strandat 693.130 kb on - strandat 693.130 kb on - strandat 693.130 kb on - strandat 693.130 kb on - strandat 693.135 kb on - strandat 693.137 kb on - strandat 693.139 kb on + strandat 693.147 kb on - strandat 693.162 kb on + strandat 693.190 kb on + strandat 693.190 kb on + strandat 693.190 kb on + strandat 693.195 kb on + strandat 693.198 kb on - strandat 693.198 kb on - strandat 693.213 kb on - strand, within MPMX20_00674at 693.217 kb on - strand, within MPMX20_00674at 693.220 kb on + strand, within MPMX20_00674at 693.220 kb on + strand, within MPMX20_00674at 693.220 kb on + strand, within MPMX20_00674at 693.220 kb on + strand, within MPMX20_00674at 693.223 kb on - strand, within MPMX20_00674at 693.228 kb on - strand, within MPMX20_00674at 693.228 kb on - strand, within MPMX20_00674at 693.228 kb on - strand, within MPMX20_00674at 693.228 kb on - strand, within MPMX20_00674at 693.236 kb on + strand, within MPMX20_00674at 693.236 kb on + strand, within MPMX20_00674at 693.241 kb on + strand, within MPMX20_00674at 693.244 kb on - strand, within MPMX20_00674at 693.260 kb on + strand, within MPMX20_00674at 693.268 kb on - strand, within MPMX20_00674at 693.355 kb on - strand, within MPMX20_00674at 693.355 kb on - strand, within MPMX20_00674at 693.375 kb on + strand, within MPMX20_00674at 693.383 kb on - strand, within MPMX20_00674at 693.383 kb on - strand, within MPMX20_00674at 693.444 kb on + strand, within MPMX20_00674at 693.449 kb on + strand, within MPMX20_00674at 693.452 kb on - strand, within MPMX20_00674at 693.453 kb on - strand, within MPMX20_00674at 693.457 kb on - strand, within MPMX20_00674at 693.484 kb on + strand, within MPMX20_00674at 693.484 kb on + strand, within MPMX20_00674at 693.492 kb on + strand, within MPMX20_00674at 693.492 kb on + strand, within MPMX20_00674at 693.501 kb on - strand, within MPMX20_00674at 693.530 kb on - strand, within MPMX20_00674at 693.546 kb on + strand, within MPMX20_00674at 693.554 kb on - strand, within MPMX20_00674at 693.630 kb on + strand, within MPMX20_00674at 693.767 kb on + strandat 693.767 kb on + strandat 693.775 kb on + strandat 693.775 kb on + strandat 693.789 kb on + strandat 693.797 kb on - strandat 693.798 kb on - strandat 693.843 kb on + strandat 693.860 kb on - strandat 693.888 kb on - strandat 693.892 kb on + strandat 693.893 kb on + strandat 693.900 kb on - strandat 693.945 kb on + strand, within MPMX20_00675at 693.945 kb on + strand, within MPMX20_00675at 693.950 kb on + strand, within MPMX20_00675at 693.965 kb on + strand, within MPMX20_00675at 693.965 kb on + strand, within MPMX20_00675at 693.973 kb on - strand, within MPMX20_00675at 694.009 kb on + strand, within MPMX20_00675at 694.009 kb on + strand, within MPMX20_00675at 694.019 kb on + strand, within MPMX20_00675at 694.032 kb on - strand, within MPMX20_00675at 694.034 kb on + strand, within MPMX20_00675at 694.034 kb on + strand, within MPMX20_00675at 694.034 kb on + strand, within MPMX20_00675at 694.042 kb on - strandat 694.042 kb on - strandat 694.042 kb on - strandat 694.042 kb on - strandat 694.042 kb on - strandat 694.127 kb on + strandat 694.127 kb on + strandat 694.205 kb on + strandat 694.205 kb on + strandat 694.210 kb on + strandat 694.213 kb on - strandat 694.213 kb on - strandat 694.233 kb on - strandat 694.259 kb on + strandat 694.259 kb on + strandat 694.267 kb on - strandat 694.270 kb on - strandat 694.376 kb on + strand, within MPMX20_00676at 694.383 kb on + strand, within MPMX20_00676at 694.383 kb on + strand, within MPMX20_00676at 694.389 kb on - strand, within MPMX20_00676at 694.391 kb on - strand, within MPMX20_00676at 694.427 kb on + strand, within MPMX20_00676at 694.499 kb on - strand, within MPMX20_00676at 694.516 kb on + strand, within MPMX20_00676at 694.541 kb on + strand, within MPMX20_00676at 694.549 kb on - strand, within MPMX20_00676at 694.605 kb on - strand, within MPMX20_00676at 694.617 kb on + strand, within MPMX20_00676at 694.701 kb on + strand, within MPMX20_00676at 694.783 kb on + strand, within MPMX20_00676at 694.791 kb on - strand, within MPMX20_00676at 694.822 kb on + strand, within MPMX20_00676at 694.825 kb on - strand, within MPMX20_00676at 694.827 kb on + strand, within MPMX20_00676at 694.835 kb on - strand, within MPMX20_00676at 694.855 kb on + strand, within MPMX20_00676at 694.860 kb on + strand, within MPMX20_00676at 694.868 kb on - strand, within MPMX20_00676at 694.868 kb on - strand, within MPMX20_00676at 694.868 kb on - strand, within MPMX20_00676at 694.883 kb on + strand, within MPMX20_00676at 694.886 kb on - strand, within MPMX20_00676at 694.952 kb on - strand, within MPMX20_00676at 694.955 kb on + strand, within MPMX20_00676at 694.996 kb on + strand, within MPMX20_00676at 694.996 kb on + strand, within MPMX20_00676at 695.001 kb on + strand, within MPMX20_00676at 695.006 kb on + strand, within MPMX20_00676at 695.009 kb on - strand, within MPMX20_00676at 695.009 kb on - strand, within MPMX20_00676at 695.025 kb on - strand, within MPMX20_00676

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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692,985 - +1.7
692,992 + -0.2
693,004 + -0.3
693,004 + -0.1
693,004 + -0.2
693,004 + -0.4
693,006 + +0.5
693,006 + +0.8
693,006 + +0.6
693,012 - +1.6
693,012 - -0.1
693,014 - -0.4
693,014 - -0.7
693,014 - -0.9
693,014 - +1.8
693,014 - -1.0
693,035 + -0.9
693,035 - -0.7
693,047 + +2.2
693,055 - -1.2
693,055 - -0.6
693,122 + -0.4
693,127 + -3.0
693,129 + -0.1
693,130 - -1.4
693,130 - -0.5
693,130 - +0.9
693,130 - +1.2
693,135 - -0.2
693,137 - +0.6
693,139 + -1.7
693,147 - -0.4
693,162 + -1.0
693,190 + -0.4
693,190 + +1.6
693,190 + +2.2
693,195 + -1.8
693,198 - +0.2
693,198 - -0.6
693,213 - MPMX20_00674 0.10 +0.4
693,217 - MPMX20_00674 0.11 -0.8
693,220 + MPMX20_00674 0.11 -2.6
693,220 + MPMX20_00674 0.11 -0.1
693,220 + MPMX20_00674 0.11 -0.3
693,220 + MPMX20_00674 0.11 -1.2
693,223 - MPMX20_00674 0.12 +0.0
693,228 - MPMX20_00674 0.13 +3.5
693,228 - MPMX20_00674 0.13 -0.2
693,228 - MPMX20_00674 0.13 -0.4
693,228 - MPMX20_00674 0.13 -0.2
693,236 + MPMX20_00674 0.14 -0.8
693,236 + MPMX20_00674 0.14 -1.0
693,241 + MPMX20_00674 0.15 -0.2
693,244 - MPMX20_00674 0.15 -0.3
693,260 + MPMX20_00674 0.18 +0.5
693,268 - MPMX20_00674 0.19 -0.4
693,355 - MPMX20_00674 0.33 -0.6
693,355 - MPMX20_00674 0.33 +3.2
693,375 + MPMX20_00674 0.36 +0.1
693,383 - MPMX20_00674 0.38 +0.6
693,383 - MPMX20_00674 0.38 -0.2
693,444 + MPMX20_00674 0.48 -0.6
693,449 + MPMX20_00674 0.48 +1.2
693,452 - MPMX20_00674 0.49 +0.3
693,453 - MPMX20_00674 0.49 -0.5
693,457 - MPMX20_00674 0.50 -0.3
693,484 + MPMX20_00674 0.54 +0.8
693,484 + MPMX20_00674 0.54 -0.3
693,492 + MPMX20_00674 0.55 -0.3
693,492 + MPMX20_00674 0.55 -1.2
693,501 - MPMX20_00674 0.57 -1.5
693,530 - MPMX20_00674 0.61 +0.3
693,546 + MPMX20_00674 0.64 -0.4
693,554 - MPMX20_00674 0.65 +2.2
693,630 + MPMX20_00674 0.78 -0.9
693,767 + +2.0
693,767 + -0.2
693,775 + +0.3
693,775 + +3.2
693,789 + +0.5
693,797 - -0.3
693,798 - -0.4
693,843 + -0.8
693,860 - -0.0
693,888 - -0.5
693,892 + -0.2
693,893 + -0.6
693,900 - -0.2
693,945 + MPMX20_00675 0.30 -0.5
693,945 + MPMX20_00675 0.30 -0.7
693,950 + MPMX20_00675 0.33 +0.8
693,965 + MPMX20_00675 0.42 -0.2
693,965 + MPMX20_00675 0.42 -0.0
693,973 - MPMX20_00675 0.47 +0.4
694,009 + MPMX20_00675 0.69 +0.5
694,009 + MPMX20_00675 0.69 +0.1
694,019 + MPMX20_00675 0.75 -1.3
694,032 - MPMX20_00675 0.83 +1.3
694,034 + MPMX20_00675 0.85 -0.5
694,034 + MPMX20_00675 0.85 -0.7
694,034 + MPMX20_00675 0.85 -0.2
694,042 - -0.6
694,042 - +1.7
694,042 - -0.4
694,042 - -0.2
694,042 - -0.2
694,127 + +11.4
694,127 + +0.8
694,205 + -1.1
694,205 + +0.4
694,210 + +1.2
694,213 - -0.5
694,213 - +0.3
694,233 - -0.8
694,259 + -0.7
694,259 + -2.3
694,267 - -0.4
694,270 - -0.5
694,376 + MPMX20_00676 0.19 +0.6
694,383 + MPMX20_00676 0.19 +0.2
694,383 + MPMX20_00676 0.19 -0.8
694,389 - MPMX20_00676 0.20 +0.6
694,391 - MPMX20_00676 0.20 -1.0
694,427 + MPMX20_00676 0.24 -0.1
694,499 - MPMX20_00676 0.30 -0.6
694,516 + MPMX20_00676 0.32 -1.0
694,541 + MPMX20_00676 0.34 -1.6
694,549 - MPMX20_00676 0.35 +0.3
694,605 - MPMX20_00676 0.40 -0.8
694,617 + MPMX20_00676 0.42 -0.8
694,701 + MPMX20_00676 0.50 +0.6
694,783 + MPMX20_00676 0.57 -1.3
694,791 - MPMX20_00676 0.58 -0.0
694,822 + MPMX20_00676 0.61 +1.6
694,825 - MPMX20_00676 0.61 +0.9
694,827 + MPMX20_00676 0.62 -0.4
694,835 - MPMX20_00676 0.62 -1.2
694,855 + MPMX20_00676 0.64 -0.2
694,860 + MPMX20_00676 0.65 +0.2
694,868 - MPMX20_00676 0.65 +0.6
694,868 - MPMX20_00676 0.65 +1.6
694,868 - MPMX20_00676 0.65 +0.6
694,883 + MPMX20_00676 0.67 +0.6
694,886 - MPMX20_00676 0.67 -0.3
694,952 - MPMX20_00676 0.73 -0.5
694,955 + MPMX20_00676 0.74 +0.7
694,996 + MPMX20_00676 0.78 +0.6
694,996 + MPMX20_00676 0.78 -0.6
695,001 + MPMX20_00676 0.78 -0.0
695,006 + MPMX20_00676 0.79 +0.2
695,009 - MPMX20_00676 0.79 -0.5
695,009 - MPMX20_00676 0.79 +0.1
695,025 - MPMX20_00676 0.80 +0.1

Or see this region's nucleotide sequence