Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04531 and MPMX20_04532 are separated by 276 nucleotides MPMX20_04532 and MPMX20_04533 are separated by 48 nucleotides MPMX20_04533 and MPMX20_04534 are separated by 200 nucleotides
MPMX20_04531: MPMX20_04531 - Cystathionine gamma-synthase, at 4,744,288 to 4,745,448
_04531
MPMX20_04532: MPMX20_04532 - Met repressor, at 4,745,725 to 4,746,042
_04532
MPMX20_04533: MPMX20_04533 - 50S ribosomal protein L31, at 4,746,091 to 4,746,303
_04533
MPMX20_04534: MPMX20_04534 - Primosomal protein N', at 4,746,504 to 4,748,699
_04534
Position (kb)
4745
4746
4747 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4744.735 kb on + strand, within MPMX20_04531 at 4744.765 kb on - strand, within MPMX20_04531 at 4744.775 kb on + strand, within MPMX20_04531 at 4744.824 kb on - strand, within MPMX20_04531 at 4744.890 kb on + strand, within MPMX20_04531 at 4744.898 kb on - strand, within MPMX20_04531 at 4744.903 kb on + strand, within MPMX20_04531 at 4744.925 kb on + strand, within MPMX20_04531 at 4744.925 kb on + strand, within MPMX20_04531 at 4744.932 kb on + strand, within MPMX20_04531 at 4744.932 kb on + strand, within MPMX20_04531 at 4744.932 kb on - strand, within MPMX20_04531 at 4744.940 kb on - strand, within MPMX20_04531 at 4745.015 kb on + strand, within MPMX20_04531 at 4745.144 kb on + strand, within MPMX20_04531 at 4745.158 kb on - strand, within MPMX20_04531 at 4745.219 kb on + strand, within MPMX20_04531 at 4745.238 kb on - strand, within MPMX20_04531 at 4745.317 kb on - strand, within MPMX20_04531 at 4745.319 kb on - strand, within MPMX20_04531 at 4745.392 kb on - strand at 4745.394 kb on - strand at 4745.421 kb on + strand at 4745.436 kb on + strand at 4745.449 kb on + strand at 4745.457 kb on - strand at 4745.471 kb on - strand at 4745.633 kb on - strand at 4745.637 kb on + strand at 4745.667 kb on - strand at 4745.710 kb on + strand at 4745.710 kb on + strand at 4745.820 kb on - strand, within MPMX20_04532 at 4745.893 kb on + strand, within MPMX20_04532 at 4745.953 kb on - strand, within MPMX20_04532 at 4745.953 kb on - strand, within MPMX20_04532 at 4746.002 kb on - strand, within MPMX20_04532 at 4746.117 kb on - strand, within MPMX20_04533 at 4746.464 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 remove 4,744,735 + MPMX20_04531 0.39 -1.1 4,744,765 - MPMX20_04531 0.41 -0.4 4,744,775 + MPMX20_04531 0.42 +2.2 4,744,824 - MPMX20_04531 0.46 -2.8 4,744,890 + MPMX20_04531 0.52 -1.3 4,744,898 - MPMX20_04531 0.53 -1.0 4,744,903 + MPMX20_04531 0.53 +2.2 4,744,925 + MPMX20_04531 0.55 -0.1 4,744,925 + MPMX20_04531 0.55 +0.1 4,744,932 + MPMX20_04531 0.55 -0.2 4,744,932 + MPMX20_04531 0.55 +0.0 4,744,932 - MPMX20_04531 0.55 +1.0 4,744,940 - MPMX20_04531 0.56 -0.3 4,745,015 + MPMX20_04531 0.63 -0.3 4,745,144 + MPMX20_04531 0.74 +0.7 4,745,158 - MPMX20_04531 0.75 -0.3 4,745,219 + MPMX20_04531 0.80 +0.0 4,745,238 - MPMX20_04531 0.82 -0.6 4,745,317 - MPMX20_04531 0.89 -0.4 4,745,319 - MPMX20_04531 0.89 +1.2 4,745,392 - -0.4 4,745,394 - -0.5 4,745,421 + +0.2 4,745,436 + -0.0 4,745,449 + +2.2 4,745,457 - -0.0 4,745,471 - -0.5 4,745,633 - -0.3 4,745,637 + -0.1 4,745,667 - -1.7 4,745,710 + -0.7 4,745,710 + -1.0 4,745,820 - MPMX20_04532 0.30 +1.2 4,745,893 + MPMX20_04532 0.53 -0.6 4,745,953 - MPMX20_04532 0.72 -0.7 4,745,953 - MPMX20_04532 0.72 -1.2 4,746,002 - MPMX20_04532 0.87 -1.3 4,746,117 - MPMX20_04533 0.12 +0.4 4,746,464 + -0.6
Or see this region's nucleotide sequence