Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04237

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04234 and MPMX20_04235 are separated by 96 nucleotidesMPMX20_04235 and MPMX20_04236 are separated by 124 nucleotidesMPMX20_04236 and MPMX20_04237 are separated by 7 nucleotidesMPMX20_04237 and MPMX20_04238 overlap by 1 nucleotidesMPMX20_04238 and MPMX20_04239 overlap by 1 nucleotides MPMX20_04234: MPMX20_04234 - 30S ribosomal protein S7, at 4,421,229 to 4,421,699 _04234 MPMX20_04235: MPMX20_04235 - 30S ribosomal protein S12, at 4,421,796 to 4,422,170 _04235 MPMX20_04236: MPMX20_04236 - Protein TusB, at 4,422,295 to 4,422,582 _04236 MPMX20_04237: MPMX20_04237 - Protein TusC, at 4,422,590 to 4,422,949 _04237 MPMX20_04238: MPMX20_04238 - Sulfurtransferase TusD, at 4,422,949 to 4,423,335 _04238 MPMX20_04239: MPMX20_04239 - Transcriptional regulator DauR, at 4,423,335 to 4,424,057 _04239 Position (kb) 4422 4423Strain fitness (log2 ratio) -2 -1 0 1 2at 4422.585 kb on - strandat 4423.391 kb on - strandat 4423.527 kb on - strand, within MPMX20_04239at 4423.541 kb on + strand, within MPMX20_04239at 4423.682 kb on - strand, within MPMX20_04239at 4423.770 kb on - strand, within MPMX20_04239at 4423.819 kb on - strand, within MPMX20_04239at 4423.891 kb on - strand, within MPMX20_04239at 4423.891 kb on - strand, within MPMX20_04239at 4423.892 kb on - strand, within MPMX20_04239at 4423.945 kb on - strand, within MPMX20_04239at 4423.945 kb on - strand, within MPMX20_04239at 4423.945 kb on - strand, within MPMX20_04239at 4423.945 kb on - strand, within MPMX20_04239at 4423.945 kb on - strand, within MPMX20_04239at 4423.945 kb on - strand, within MPMX20_04239

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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4,422,585 - +0.5
4,423,391 - -0.4
4,423,527 - MPMX20_04239 0.27 +0.7
4,423,541 + MPMX20_04239 0.28 +0.2
4,423,682 - MPMX20_04239 0.48 -1.5
4,423,770 - MPMX20_04239 0.60 -2.2
4,423,819 - MPMX20_04239 0.67 -0.2
4,423,891 - MPMX20_04239 0.77 +1.4
4,423,891 - MPMX20_04239 0.77 -1.6
4,423,892 - MPMX20_04239 0.77 +1.8
4,423,945 - MPMX20_04239 0.84 -1.7
4,423,945 - MPMX20_04239 0.84 -0.0
4,423,945 - MPMX20_04239 0.84 -0.4
4,423,945 - MPMX20_04239 0.84 +0.9
4,423,945 - MPMX20_04239 0.84 -0.2
4,423,945 - MPMX20_04239 0.84 -0.6

Or see this region's nucleotide sequence