Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04136

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04134 and MPMX20_04135 are separated by 15 nucleotidesMPMX20_04135 and MPMX20_04136 are separated by 289 nucleotidesMPMX20_04136 and MPMX20_04137 are separated by 189 nucleotidesMPMX20_04137 and MPMX20_04138 are separated by 169 nucleotides MPMX20_04134: MPMX20_04134 - 30S ribosomal protein S9, at 4,334,841 to 4,335,233 _04134 MPMX20_04135: MPMX20_04135 - 50S ribosomal protein L13, at 4,335,249 to 4,335,677 _04135 MPMX20_04136: MPMX20_04136 - Cell division protein ZapE, at 4,335,967 to 4,337,091 _04136 MPMX20_04137: MPMX20_04137 - Inner membrane protein YhcB, at 4,337,281 to 4,337,679 _04137 MPMX20_04138: MPMX20_04138 - Periplasmic pH-dependent serine endoprotease DegQ, at 4,337,849 to 4,339,216 _04138 Position (kb) 4335 4336 4337 4338Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4335.926 kb on + strandat 4335.931 kb on + strandat 4335.938 kb on + strandat 4335.950 kb on - strandat 4335.960 kb on - strandat 4335.960 kb on - strandat 4335.984 kb on + strandat 4335.984 kb on + strandat 4336.058 kb on + strandat 4336.058 kb on + strandat 4336.058 kb on + strandat 4336.058 kb on + strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.066 kb on - strandat 4336.072 kb on + strandat 4336.101 kb on + strand, within MPMX20_04136at 4336.165 kb on - strand, within MPMX20_04136at 4336.167 kb on - strand, within MPMX20_04136at 4336.192 kb on - strand, within MPMX20_04136at 4336.194 kb on + strand, within MPMX20_04136at 4336.248 kb on + strand, within MPMX20_04136at 4336.248 kb on + strand, within MPMX20_04136at 4336.256 kb on - strand, within MPMX20_04136at 4336.271 kb on - strand, within MPMX20_04136at 4336.298 kb on + strand, within MPMX20_04136at 4336.304 kb on - strand, within MPMX20_04136at 4336.320 kb on + strand, within MPMX20_04136at 4336.333 kb on - strand, within MPMX20_04136at 4336.404 kb on + strand, within MPMX20_04136at 4336.494 kb on + strand, within MPMX20_04136at 4336.531 kb on + strand, within MPMX20_04136at 4336.539 kb on - strand, within MPMX20_04136at 4336.539 kb on - strand, within MPMX20_04136at 4336.539 kb on - strand, within MPMX20_04136at 4336.539 kb on - strand, within MPMX20_04136at 4336.584 kb on + strand, within MPMX20_04136at 4336.584 kb on + strand, within MPMX20_04136at 4336.584 kb on + strand, within MPMX20_04136at 4336.584 kb on + strand, within MPMX20_04136at 4336.584 kb on + strand, within MPMX20_04136at 4336.586 kb on - strand, within MPMX20_04136at 4336.592 kb on - strand, within MPMX20_04136at 4336.607 kb on + strand, within MPMX20_04136at 4336.607 kb on + strand, within MPMX20_04136at 4336.615 kb on - strand, within MPMX20_04136at 4336.672 kb on + strand, within MPMX20_04136at 4336.680 kb on - strand, within MPMX20_04136at 4336.696 kb on - strand, within MPMX20_04136at 4336.697 kb on - strand, within MPMX20_04136at 4336.739 kb on + strand, within MPMX20_04136at 4336.791 kb on + strand, within MPMX20_04136at 4336.791 kb on + strand, within MPMX20_04136at 4336.791 kb on + strand, within MPMX20_04136at 4336.791 kb on + strand, within MPMX20_04136at 4336.791 kb on + strand, within MPMX20_04136at 4336.791 kb on + strand, within MPMX20_04136at 4336.799 kb on - strand, within MPMX20_04136at 4336.799 kb on - strand, within MPMX20_04136at 4336.799 kb on - strand, within MPMX20_04136at 4336.866 kb on - strand, within MPMX20_04136at 4336.884 kb on + strand, within MPMX20_04136at 4336.921 kb on + strand, within MPMX20_04136at 4336.921 kb on + strand, within MPMX20_04136at 4336.926 kb on + strand, within MPMX20_04136at 4336.929 kb on - strand, within MPMX20_04136at 4336.929 kb on - strand, within MPMX20_04136at 4336.929 kb on - strand, within MPMX20_04136at 4336.948 kb on + strand, within MPMX20_04136at 4337.023 kb on - strandat 4337.036 kb on + strandat 4337.042 kb on - strandat 4337.044 kb on - strandat 4337.046 kb on + strandat 4337.046 kb on + strandat 4337.054 kb on - strandat 4337.125 kb on - strandat 4337.154 kb on + strandat 4337.154 kb on + strandat 4337.154 kb on + strandat 4337.154 kb on + strandat 4337.154 kb on + strandat 4337.154 kb on + strandat 4337.162 kb on - strandat 4337.162 kb on - strandat 4337.162 kb on - strandat 4337.162 kb on - strandat 4337.177 kb on - strandat 4337.183 kb on + strandat 4337.188 kb on - strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.229 kb on + strandat 4337.237 kb on - strandat 4337.237 kb on - strandat 4337.237 kb on - strandat 4337.237 kb on - strandat 4337.237 kb on - strandat 4337.240 kb on + strandat 4337.249 kb on - strandat 4337.256 kb on - strandat 4337.258 kb on + strandat 4337.258 kb on - strandat 4337.258 kb on - strandat 4337.266 kb on - strandat 4337.285 kb on + strandat 4337.285 kb on - strandat 4337.293 kb on - strandat 4337.345 kb on - strand, within MPMX20_04137at 4337.380 kb on + strand, within MPMX20_04137at 4337.380 kb on + strand, within MPMX20_04137at 4337.400 kb on + strand, within MPMX20_04137at 4337.408 kb on - strand, within MPMX20_04137at 4337.426 kb on + strand, within MPMX20_04137at 4337.431 kb on + strand, within MPMX20_04137at 4337.444 kb on + strand, within MPMX20_04137at 4337.497 kb on - strand, within MPMX20_04137at 4337.611 kb on + strand, within MPMX20_04137at 4337.611 kb on + strand, within MPMX20_04137at 4337.619 kb on - strand, within MPMX20_04137at 4337.709 kb on + strandat 4337.709 kb on + strandat 4337.758 kb on + strandat 4337.766 kb on - strandat 4337.768 kb on + strandat 4337.869 kb on + strandat 4337.882 kb on - strandat 4337.885 kb on - strandat 4337.889 kb on + strandat 4337.889 kb on + strandat 4337.889 kb on + strandat 4337.897 kb on - strandat 4337.950 kb on + strandat 4338.019 kb on + strand, within MPMX20_04138at 4338.027 kb on - strand, within MPMX20_04138at 4338.053 kb on + strand, within MPMX20_04138

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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4,335,926 + +0.1
4,335,931 + -0.7
4,335,938 + -1.0
4,335,950 - +3.3
4,335,960 - -0.6
4,335,960 - +2.0
4,335,984 + +0.3
4,335,984 + +0.5
4,336,058 + -0.3
4,336,058 + -2.6
4,336,058 + +0.8
4,336,058 + -0.3
4,336,066 - -0.5
4,336,066 - -0.8
4,336,066 - -0.3
4,336,066 - -0.6
4,336,066 - +2.3
4,336,066 - -1.1
4,336,066 - -1.7
4,336,072 + -1.2
4,336,101 + MPMX20_04136 0.12 -1.2
4,336,165 - MPMX20_04136 0.18 -2.3
4,336,167 - MPMX20_04136 0.18 -1.8
4,336,192 - MPMX20_04136 0.20 +1.7
4,336,194 + MPMX20_04136 0.20 -1.5
4,336,248 + MPMX20_04136 0.25 -0.8
4,336,248 + MPMX20_04136 0.25 -1.7
4,336,256 - MPMX20_04136 0.26 +1.3
4,336,271 - MPMX20_04136 0.27 -0.1
4,336,298 + MPMX20_04136 0.29 -0.7
4,336,304 - MPMX20_04136 0.30 -0.7
4,336,320 + MPMX20_04136 0.31 -3.4
4,336,333 - MPMX20_04136 0.33 -1.7
4,336,404 + MPMX20_04136 0.39 -0.3
4,336,494 + MPMX20_04136 0.47 -3.1
4,336,531 + MPMX20_04136 0.50 -1.6
4,336,539 - MPMX20_04136 0.51 -2.7
4,336,539 - MPMX20_04136 0.51 -0.4
4,336,539 - MPMX20_04136 0.51 -1.0
4,336,539 - MPMX20_04136 0.51 -1.8
4,336,584 + MPMX20_04136 0.55 +1.7
4,336,584 + MPMX20_04136 0.55 -1.5
4,336,584 + MPMX20_04136 0.55 -0.7
4,336,584 + MPMX20_04136 0.55 -1.5
4,336,584 + MPMX20_04136 0.55 -1.3
4,336,586 - MPMX20_04136 0.55 -2.1
4,336,592 - MPMX20_04136 0.56 -1.2
4,336,607 + MPMX20_04136 0.57 -2.3
4,336,607 + MPMX20_04136 0.57 -1.7
4,336,615 - MPMX20_04136 0.58 -2.2
4,336,672 + MPMX20_04136 0.63 -0.7
4,336,680 - MPMX20_04136 0.63 -1.3
4,336,696 - MPMX20_04136 0.65 -3.0
4,336,697 - MPMX20_04136 0.65 -1.1
4,336,739 + MPMX20_04136 0.69 -0.1
4,336,791 + MPMX20_04136 0.73 -1.7
4,336,791 + MPMX20_04136 0.73 -1.9
4,336,791 + MPMX20_04136 0.73 -1.5
4,336,791 + MPMX20_04136 0.73 -3.3
4,336,791 + MPMX20_04136 0.73 -1.7
4,336,791 + MPMX20_04136 0.73 -0.9
4,336,799 - MPMX20_04136 0.74 +2.3
4,336,799 - MPMX20_04136 0.74 -0.9
4,336,799 - MPMX20_04136 0.74 -1.5
4,336,866 - MPMX20_04136 0.80 -0.9
4,336,884 + MPMX20_04136 0.82 -1.8
4,336,921 + MPMX20_04136 0.85 +2.3
4,336,921 + MPMX20_04136 0.85 -1.5
4,336,926 + MPMX20_04136 0.85 -0.7
4,336,929 - MPMX20_04136 0.86 -1.0
4,336,929 - MPMX20_04136 0.86 -1.2
4,336,929 - MPMX20_04136 0.86 -0.6
4,336,948 + MPMX20_04136 0.87 -3.2
4,337,023 - -2.2
4,337,036 + -0.2
4,337,042 - -0.9
4,337,044 - -0.9
4,337,046 + +2.3
4,337,046 + -0.7
4,337,054 - +1.7
4,337,125 - -0.3
4,337,154 + -1.0
4,337,154 + +4.3
4,337,154 + -0.4
4,337,154 + +0.4
4,337,154 + -2.2
4,337,154 + -0.1
4,337,162 - -0.1
4,337,162 - -2.1
4,337,162 - -1.3
4,337,162 - +0.3
4,337,177 - -1.2
4,337,183 + -1.5
4,337,188 - -0.5
4,337,229 + -2.3
4,337,229 + -0.4
4,337,229 + +1.3
4,337,229 + +0.8
4,337,229 + -1.5
4,337,229 + -0.1
4,337,229 + -0.7
4,337,229 + +0.3
4,337,229 + +3.3
4,337,229 + +0.0
4,337,229 + -0.9
4,337,229 + +1.4
4,337,229 + -3.1
4,337,229 + +1.3
4,337,237 - +4.0
4,337,237 - -1.1
4,337,237 - -1.4
4,337,237 - -1.7
4,337,237 - +1.7
4,337,240 + +0.4
4,337,249 - -0.3
4,337,256 - -1.0
4,337,258 + +0.6
4,337,258 - -0.1
4,337,258 - -0.1
4,337,266 - +2.3
4,337,285 + -1.1
4,337,285 - -1.9
4,337,293 - -0.3
4,337,345 - MPMX20_04137 0.16 -1.8
4,337,380 + MPMX20_04137 0.25 -2.0
4,337,380 + MPMX20_04137 0.25 -1.1
4,337,400 + MPMX20_04137 0.30 -1.6
4,337,408 - MPMX20_04137 0.32 -0.4
4,337,426 + MPMX20_04137 0.36 -1.2
4,337,431 + MPMX20_04137 0.38 -1.1
4,337,444 + MPMX20_04137 0.41 +1.7
4,337,497 - MPMX20_04137 0.54 -2.0
4,337,611 + MPMX20_04137 0.83 -0.6
4,337,611 + MPMX20_04137 0.83 -0.6
4,337,619 - MPMX20_04137 0.85 -1.2
4,337,709 + -0.5
4,337,709 + -1.6
4,337,758 + -0.1
4,337,766 - +0.3
4,337,768 + +0.5
4,337,869 + +0.4
4,337,882 - -1.7
4,337,885 - -0.5
4,337,889 + +0.4
4,337,889 + -2.7
4,337,889 + -1.0
4,337,897 - +0.4
4,337,950 + -0.1
4,338,019 + MPMX20_04138 0.12 -0.8
4,338,027 - MPMX20_04138 0.13 +0.4
4,338,053 + MPMX20_04138 0.15 +0.2

Or see this region's nucleotide sequence