Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03163

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03161 and MPMX20_03162 are separated by 305 nucleotidesMPMX20_03162 and MPMX20_03163 are separated by 46 nucleotidesMPMX20_03163 and MPMX20_03164 are separated by 93 nucleotides MPMX20_03161: MPMX20_03161 - hypothetical protein, at 3,320,836 to 3,321,165 _03161 MPMX20_03162: MPMX20_03162 - hypothetical protein, at 3,321,471 to 3,321,689 _03162 MPMX20_03163: MPMX20_03163 - hypothetical protein, at 3,321,736 to 3,321,846 _03163 MPMX20_03164: MPMX20_03164 - hypothetical protein, at 3,321,940 to 3,322,899 _03164 Position (kb) 3321 3322Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 3320.752 kb on + strandat 3320.752 kb on + strandat 3320.754 kb on - strandat 3320.760 kb on - strandat 3320.782 kb on + strandat 3320.790 kb on - strandat 3320.792 kb on - strandat 3320.792 kb on - strandat 3320.808 kb on + strandat 3320.822 kb on + strandat 3320.822 kb on + strandat 3320.822 kb on + strandat 3320.822 kb on + strandat 3320.830 kb on - strandat 3320.830 kb on - strandat 3320.831 kb on - strandat 3320.831 kb on - strandat 3320.833 kb on + strandat 3320.856 kb on - strandat 3320.857 kb on + strandat 3320.857 kb on + strandat 3320.931 kb on - strand, within MPMX20_03161at 3320.931 kb on - strand, within MPMX20_03161at 3320.937 kb on - strand, within MPMX20_03161at 3320.937 kb on - strand, within MPMX20_03161at 3320.942 kb on - strand, within MPMX20_03161at 3320.950 kb on - strand, within MPMX20_03161at 3320.952 kb on + strand, within MPMX20_03161at 3320.961 kb on - strand, within MPMX20_03161at 3321.061 kb on + strand, within MPMX20_03161at 3321.069 kb on - strand, within MPMX20_03161at 3321.069 kb on - strand, within MPMX20_03161at 3321.088 kb on + strand, within MPMX20_03161at 3321.106 kb on - strand, within MPMX20_03161at 3321.111 kb on + strand, within MPMX20_03161at 3321.132 kb on + strand, within MPMX20_03161at 3321.137 kb on + strandat 3321.143 kb on + strandat 3321.145 kb on - strandat 3321.145 kb on - strandat 3321.151 kb on - strandat 3321.151 kb on - strandat 3321.151 kb on - strandat 3321.152 kb on + strandat 3321.160 kb on - strandat 3321.166 kb on + strandat 3321.174 kb on - strandat 3321.174 kb on - strandat 3321.174 kb on - strandat 3321.201 kb on + strandat 3321.234 kb on + strandat 3321.234 kb on + strandat 3321.243 kb on + strandat 3321.243 kb on + strandat 3321.243 kb on + strandat 3321.243 kb on + strandat 3321.251 kb on - strandat 3321.251 kb on - strandat 3321.253 kb on + strandat 3321.259 kb on + strandat 3321.259 kb on + strandat 3321.259 kb on + strandat 3321.265 kb on + strandat 3321.265 kb on + strandat 3321.265 kb on + strandat 3321.266 kb on - strandat 3321.267 kb on - strandat 3321.267 kb on - strandat 3321.267 kb on - strandat 3321.267 kb on - strandat 3321.267 kb on - strandat 3321.268 kb on - strandat 3321.268 kb on - strandat 3321.273 kb on - strandat 3321.273 kb on - strandat 3321.273 kb on - strandat 3321.273 kb on - strandat 3321.273 kb on - strandat 3321.273 kb on - strandat 3321.278 kb on + strandat 3321.278 kb on - strandat 3321.285 kb on + strandat 3321.285 kb on + strandat 3321.320 kb on + strandat 3321.325 kb on + strandat 3321.381 kb on + strandat 3321.381 kb on - strandat 3321.424 kb on + strandat 3321.460 kb on + strandat 3321.468 kb on - strandat 3321.468 kb on - strandat 3321.481 kb on + strandat 3321.514 kb on - strand, within MPMX20_03162at 3321.515 kb on - strand, within MPMX20_03162at 3321.515 kb on - strand, within MPMX20_03162at 3321.517 kb on + strand, within MPMX20_03162at 3321.531 kb on - strand, within MPMX20_03162at 3321.549 kb on - strand, within MPMX20_03162at 3321.615 kb on + strand, within MPMX20_03162at 3321.615 kb on + strand, within MPMX20_03162at 3321.620 kb on + strand, within MPMX20_03162at 3321.620 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.627 kb on + strand, within MPMX20_03162at 3321.628 kb on - strand, within MPMX20_03162at 3321.628 kb on - strand, within MPMX20_03162at 3321.628 kb on - strand, within MPMX20_03162at 3321.630 kb on - strand, within MPMX20_03162at 3321.635 kb on - strand, within MPMX20_03162at 3321.635 kb on - strand, within MPMX20_03162at 3321.635 kb on - strand, within MPMX20_03162at 3321.635 kb on - strand, within MPMX20_03162at 3321.635 kb on - strand, within MPMX20_03162at 3321.635 kb on - strand, within MPMX20_03162at 3321.678 kb on - strandat 3321.715 kb on + strandat 3321.753 kb on - strand, within MPMX20_03163at 3321.753 kb on - strand, within MPMX20_03163at 3321.862 kb on - strandat 3321.951 kb on - strandat 3322.004 kb on + strandat 3322.009 kb on + strandat 3322.010 kb on - strandat 3322.104 kb on + strand, within MPMX20_03164at 3322.109 kb on + strand, within MPMX20_03164at 3322.173 kb on + strand, within MPMX20_03164at 3322.191 kb on - strand, within MPMX20_03164at 3322.213 kb on + strand, within MPMX20_03164at 3322.213 kb on + strand, within MPMX20_03164at 3322.221 kb on - strand, within MPMX20_03164at 3322.238 kb on - strand, within MPMX20_03164at 3322.245 kb on + strand, within MPMX20_03164at 3322.248 kb on - strand, within MPMX20_03164at 3322.248 kb on - strand, within MPMX20_03164at 3322.253 kb on - strand, within MPMX20_03164at 3322.253 kb on - strand, within MPMX20_03164at 3322.253 kb on - strand, within MPMX20_03164at 3322.294 kb on + strand, within MPMX20_03164at 3322.320 kb on + strand, within MPMX20_03164at 3322.326 kb on + strand, within MPMX20_03164at 3322.328 kb on - strand, within MPMX20_03164at 3322.369 kb on - strand, within MPMX20_03164at 3322.374 kb on - strand, within MPMX20_03164at 3322.376 kb on + strand, within MPMX20_03164at 3322.406 kb on - strand, within MPMX20_03164at 3322.469 kb on - strand, within MPMX20_03164at 3322.481 kb on + strand, within MPMX20_03164at 3322.495 kb on + strand, within MPMX20_03164at 3322.500 kb on + strand, within MPMX20_03164at 3322.500 kb on + strand, within MPMX20_03164at 3322.503 kb on - strand, within MPMX20_03164at 3322.505 kb on + strand, within MPMX20_03164at 3322.505 kb on + strand, within MPMX20_03164at 3322.505 kb on + strand, within MPMX20_03164at 3322.505 kb on + strand, within MPMX20_03164at 3322.513 kb on - strand, within MPMX20_03164at 3322.550 kb on + strand, within MPMX20_03164at 3322.579 kb on + strand, within MPMX20_03164at 3322.598 kb on + strand, within MPMX20_03164at 3322.604 kb on + strand, within MPMX20_03164at 3322.624 kb on + strand, within MPMX20_03164at 3322.633 kb on + strand, within MPMX20_03164at 3322.643 kb on + strand, within MPMX20_03164at 3322.643 kb on + strand, within MPMX20_03164at 3322.643 kb on + strand, within MPMX20_03164at 3322.651 kb on - strand, within MPMX20_03164at 3322.651 kb on - strand, within MPMX20_03164at 3322.651 kb on - strand, within MPMX20_03164at 3322.651 kb on - strand, within MPMX20_03164at 3322.658 kb on + strand, within MPMX20_03164at 3322.683 kb on - strand, within MPMX20_03164at 3322.686 kb on + strand, within MPMX20_03164at 3322.686 kb on + strand, within MPMX20_03164at 3322.686 kb on + strand, within MPMX20_03164at 3322.702 kb on + strand, within MPMX20_03164at 3322.702 kb on + strand, within MPMX20_03164at 3322.716 kb on + strand, within MPMX20_03164at 3322.717 kb on - strand, within MPMX20_03164at 3322.731 kb on + strand, within MPMX20_03164at 3322.731 kb on + strand, within MPMX20_03164at 3322.732 kb on + strand, within MPMX20_03164at 3322.739 kb on - strand, within MPMX20_03164at 3322.740 kb on - strand, within MPMX20_03164at 3322.746 kb on + strand, within MPMX20_03164at 3322.753 kb on - strand, within MPMX20_03164at 3322.754 kb on + strand, within MPMX20_03164at 3322.759 kb on + strand, within MPMX20_03164at 3322.768 kb on - strand, within MPMX20_03164at 3322.837 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,320,752 + -0.3
3,320,752 + +0.3
3,320,754 - +0.1
3,320,760 - -0.8
3,320,782 + +2.9
3,320,790 - +4.9
3,320,792 - -0.0
3,320,792 - +0.9
3,320,808 + +1.1
3,320,822 + -0.5
3,320,822 + -0.4
3,320,822 + +0.7
3,320,822 + +0.3
3,320,830 - -0.2
3,320,830 - +0.1
3,320,831 - +1.1
3,320,831 - +1.0
3,320,833 + -0.3
3,320,856 - +0.7
3,320,857 + -1.0
3,320,857 + +0.4
3,320,931 - MPMX20_03161 0.29 -0.1
3,320,931 - MPMX20_03161 0.29 +0.3
3,320,937 - MPMX20_03161 0.31 -2.2
3,320,937 - MPMX20_03161 0.31 -0.8
3,320,942 - MPMX20_03161 0.32 -0.3
3,320,950 - MPMX20_03161 0.35 +0.5
3,320,952 + MPMX20_03161 0.35 +0.4
3,320,961 - MPMX20_03161 0.38 +0.5
3,321,061 + MPMX20_03161 0.68 +0.7
3,321,069 - MPMX20_03161 0.71 +0.6
3,321,069 - MPMX20_03161 0.71 -1.0
3,321,088 + MPMX20_03161 0.76 +0.4
3,321,106 - MPMX20_03161 0.82 -2.9
3,321,111 + MPMX20_03161 0.83 -2.6
3,321,132 + MPMX20_03161 0.90 +0.3
3,321,137 + -0.6
3,321,143 + -1.6
3,321,145 - -0.1
3,321,145 - +0.0
3,321,151 - -0.2
3,321,151 - -0.1
3,321,151 - -0.3
3,321,152 + -1.3
3,321,160 - +1.5
3,321,166 + -0.8
3,321,174 - -0.3
3,321,174 - +0.8
3,321,174 - +0.2
3,321,201 + -0.9
3,321,234 + -2.6
3,321,234 + -1.2
3,321,243 + -1.3
3,321,243 + +0.1
3,321,243 + +0.7
3,321,243 + +0.7
3,321,251 - +1.4
3,321,251 - -0.9
3,321,253 + +0.4
3,321,259 + -0.0
3,321,259 + -0.5
3,321,259 + +0.0
3,321,265 + +0.4
3,321,265 + +1.5
3,321,265 + +0.7
3,321,266 - -0.3
3,321,267 - +0.7
3,321,267 - +0.1
3,321,267 - -0.7
3,321,267 - -0.2
3,321,267 - -0.7
3,321,268 - +7.2
3,321,268 - +1.0
3,321,273 - -0.2
3,321,273 - -0.3
3,321,273 - -1.7
3,321,273 - -1.0
3,321,273 - +0.5
3,321,273 - -1.2
3,321,278 + +1.3
3,321,278 - +0.2
3,321,285 + +0.3
3,321,285 + +0.0
3,321,320 + -1.0
3,321,325 + -1.8
3,321,381 + +0.3
3,321,381 - -1.2
3,321,424 + +0.3
3,321,460 + +0.5
3,321,468 - +0.9
3,321,468 - -0.0
3,321,481 + -0.3
3,321,514 - MPMX20_03162 0.20 -0.5
3,321,515 - MPMX20_03162 0.20 +0.0
3,321,515 - MPMX20_03162 0.20 +0.2
3,321,517 + MPMX20_03162 0.21 -0.4
3,321,531 - MPMX20_03162 0.27 -0.8
3,321,549 - MPMX20_03162 0.36 +0.3
3,321,615 + MPMX20_03162 0.66 -2.2
3,321,615 + MPMX20_03162 0.66 -1.0
3,321,620 + MPMX20_03162 0.68 -1.0
3,321,620 + MPMX20_03162 0.68 -1.8
3,321,627 + MPMX20_03162 0.71 +0.1
3,321,627 + MPMX20_03162 0.71 +0.7
3,321,627 + MPMX20_03162 0.71 +0.7
3,321,627 + MPMX20_03162 0.71 -1.0
3,321,627 + MPMX20_03162 0.71 +0.6
3,321,627 + MPMX20_03162 0.71 +0.7
3,321,627 + MPMX20_03162 0.71 +1.3
3,321,627 + MPMX20_03162 0.71 -0.1
3,321,627 + MPMX20_03162 0.71 +0.4
3,321,627 + MPMX20_03162 0.71 +1.7
3,321,627 + MPMX20_03162 0.71 -1.5
3,321,628 - MPMX20_03162 0.72 +1.0
3,321,628 - MPMX20_03162 0.72 -0.0
3,321,628 - MPMX20_03162 0.72 -0.0
3,321,630 - MPMX20_03162 0.73 -1.1
3,321,635 - MPMX20_03162 0.75 +0.2
3,321,635 - MPMX20_03162 0.75 -1.1
3,321,635 - MPMX20_03162 0.75 +0.2
3,321,635 - MPMX20_03162 0.75 +0.4
3,321,635 - MPMX20_03162 0.75 -1.1
3,321,635 - MPMX20_03162 0.75 -0.4
3,321,678 - -0.6
3,321,715 + +1.7
3,321,753 - MPMX20_03163 0.15 -0.4
3,321,753 - MPMX20_03163 0.15 -1.5
3,321,862 - +1.1
3,321,951 - -1.3
3,322,004 + -0.4
3,322,009 + -2.2
3,322,010 - -0.9
3,322,104 + MPMX20_03164 0.17 -0.4
3,322,109 + MPMX20_03164 0.18 +0.4
3,322,173 + MPMX20_03164 0.24 +1.3
3,322,191 - MPMX20_03164 0.26 +0.9
3,322,213 + MPMX20_03164 0.28 +0.0
3,322,213 + MPMX20_03164 0.28 -0.1
3,322,221 - MPMX20_03164 0.29 -2.1
3,322,238 - MPMX20_03164 0.31 +0.1
3,322,245 + MPMX20_03164 0.32 -0.3
3,322,248 - MPMX20_03164 0.32 -1.7
3,322,248 - MPMX20_03164 0.32 +1.3
3,322,253 - MPMX20_03164 0.33 +0.2
3,322,253 - MPMX20_03164 0.33 -1.0
3,322,253 - MPMX20_03164 0.33 +0.6
3,322,294 + MPMX20_03164 0.37 -0.5
3,322,320 + MPMX20_03164 0.40 -0.6
3,322,326 + MPMX20_03164 0.40 +1.3
3,322,328 - MPMX20_03164 0.40 +1.0
3,322,369 - MPMX20_03164 0.45 -1.4
3,322,374 - MPMX20_03164 0.45 -1.0
3,322,376 + MPMX20_03164 0.45 -0.2
3,322,406 - MPMX20_03164 0.49 +0.4
3,322,469 - MPMX20_03164 0.55 -0.3
3,322,481 + MPMX20_03164 0.56 -0.6
3,322,495 + MPMX20_03164 0.58 -0.1
3,322,500 + MPMX20_03164 0.58 -0.0
3,322,500 + MPMX20_03164 0.58 -1.2
3,322,503 - MPMX20_03164 0.59 +4.1
3,322,505 + MPMX20_03164 0.59 +1.3
3,322,505 + MPMX20_03164 0.59 -0.0
3,322,505 + MPMX20_03164 0.59 -0.0
3,322,505 + MPMX20_03164 0.59 -0.4
3,322,513 - MPMX20_03164 0.60 -0.4
3,322,550 + MPMX20_03164 0.64 +1.0
3,322,579 + MPMX20_03164 0.67 +1.1
3,322,598 + MPMX20_03164 0.69 +1.0
3,322,604 + MPMX20_03164 0.69 -0.9
3,322,624 + MPMX20_03164 0.71 +0.6
3,322,633 + MPMX20_03164 0.72 -0.5
3,322,643 + MPMX20_03164 0.73 -0.8
3,322,643 + MPMX20_03164 0.73 +0.3
3,322,643 + MPMX20_03164 0.73 -0.6
3,322,651 - MPMX20_03164 0.74 -0.0
3,322,651 - MPMX20_03164 0.74 -0.5
3,322,651 - MPMX20_03164 0.74 +0.6
3,322,651 - MPMX20_03164 0.74 +0.3
3,322,658 + MPMX20_03164 0.75 -0.5
3,322,683 - MPMX20_03164 0.77 -0.6
3,322,686 + MPMX20_03164 0.78 +0.3
3,322,686 + MPMX20_03164 0.78 -0.0
3,322,686 + MPMX20_03164 0.78 +0.0
3,322,702 + MPMX20_03164 0.79 +0.3
3,322,702 + MPMX20_03164 0.79 -0.7
3,322,716 + MPMX20_03164 0.81 +3.6
3,322,717 - MPMX20_03164 0.81 -1.0
3,322,731 + MPMX20_03164 0.82 -0.2
3,322,731 + MPMX20_03164 0.82 -0.3
3,322,732 + MPMX20_03164 0.82 +2.1
3,322,739 - MPMX20_03164 0.83 -0.7
3,322,740 - MPMX20_03164 0.83 -0.7
3,322,746 + MPMX20_03164 0.84 +0.1
3,322,753 - MPMX20_03164 0.85 -0.8
3,322,754 + MPMX20_03164 0.85 +1.9
3,322,759 + MPMX20_03164 0.85 -0.4
3,322,768 - MPMX20_03164 0.86 -0.2
3,322,837 + -0.1

Or see this region's nucleotide sequence