Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03082

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03081 and MPMX20_03082 are separated by 173 nucleotidesMPMX20_03082 and MPMX20_03083 are separated by 20 nucleotides MPMX20_03081: MPMX20_03081 - Hydrogen peroxide-inducible genes activator, at 3,231,704 to 3,232,621 _03081 MPMX20_03082: MPMX20_03082 - Adenine deaminase 2, at 3,232,795 to 3,234,525 _03082 MPMX20_03083: MPMX20_03083 - Adenine permease AdeQ, at 3,234,546 to 3,235,889 _03083 Position (kb) 3232 3233 3234 3235Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9at 3231.797 kb on + strand, within MPMX20_03081at 3231.805 kb on - strand, within MPMX20_03081at 3231.828 kb on - strand, within MPMX20_03081at 3231.828 kb on - strand, within MPMX20_03081at 3231.828 kb on - strand, within MPMX20_03081at 3231.833 kb on - strand, within MPMX20_03081at 3231.833 kb on - strand, within MPMX20_03081at 3231.833 kb on - strand, within MPMX20_03081at 3231.833 kb on - strand, within MPMX20_03081at 3231.833 kb on - strand, within MPMX20_03081at 3231.833 kb on - strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.855 kb on + strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.863 kb on - strand, within MPMX20_03081at 3231.896 kb on + strand, within MPMX20_03081at 3232.048 kb on - strand, within MPMX20_03081at 3232.137 kb on + strand, within MPMX20_03081at 3232.145 kb on - strand, within MPMX20_03081at 3232.184 kb on - strand, within MPMX20_03081at 3232.294 kb on + strand, within MPMX20_03081at 3232.328 kb on + strand, within MPMX20_03081at 3232.336 kb on - strand, within MPMX20_03081at 3232.364 kb on - strand, within MPMX20_03081at 3232.374 kb on - strand, within MPMX20_03081at 3232.417 kb on - strand, within MPMX20_03081at 3232.501 kb on - strand, within MPMX20_03081at 3232.501 kb on - strand, within MPMX20_03081at 3232.552 kb on + strandat 3232.576 kb on - strandat 3232.653 kb on - strandat 3232.703 kb on + strandat 3232.799 kb on + strandat 3232.844 kb on + strandat 3232.881 kb on - strandat 3232.927 kb on + strandat 3232.927 kb on + strandat 3232.927 kb on + strandat 3232.935 kb on - strandat 3232.935 kb on - strandat 3232.935 kb on - strandat 3232.935 kb on - strandat 3232.935 kb on - strandat 3233.051 kb on - strand, within MPMX20_03082at 3233.235 kb on + strand, within MPMX20_03082at 3233.325 kb on + strand, within MPMX20_03082at 3233.333 kb on - strand, within MPMX20_03082at 3233.356 kb on + strand, within MPMX20_03082at 3233.364 kb on - strand, within MPMX20_03082at 3233.407 kb on + strand, within MPMX20_03082at 3233.419 kb on + strand, within MPMX20_03082at 3233.496 kb on + strand, within MPMX20_03082at 3233.496 kb on + strand, within MPMX20_03082at 3233.504 kb on - strand, within MPMX20_03082at 3233.506 kb on - strand, within MPMX20_03082at 3233.645 kb on + strand, within MPMX20_03082at 3233.682 kb on + strand, within MPMX20_03082at 3233.713 kb on - strand, within MPMX20_03082at 3233.752 kb on - strand, within MPMX20_03082at 3233.790 kb on - strand, within MPMX20_03082at 3233.795 kb on - strand, within MPMX20_03082at 3233.822 kb on + strand, within MPMX20_03082at 3233.859 kb on - strand, within MPMX20_03082at 3233.881 kb on - strand, within MPMX20_03082at 3233.882 kb on + strand, within MPMX20_03082at 3233.895 kb on - strand, within MPMX20_03082at 3233.922 kb on - strand, within MPMX20_03082at 3233.955 kb on + strand, within MPMX20_03082at 3234.014 kb on - strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.032 kb on + strand, within MPMX20_03082at 3234.040 kb on - strand, within MPMX20_03082at 3234.040 kb on - strand, within MPMX20_03082at 3234.040 kb on - strand, within MPMX20_03082at 3234.042 kb on + strand, within MPMX20_03082at 3234.104 kb on - strand, within MPMX20_03082at 3234.166 kb on - strand, within MPMX20_03082at 3234.327 kb on + strand, within MPMX20_03082at 3234.335 kb on - strand, within MPMX20_03082at 3234.335 kb on - strand, within MPMX20_03082at 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.443 kb on + strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.451 kb on - strandat 3234.514 kb on - strandat 3234.514 kb on - strandat 3234.586 kb on + strandat 3234.586 kb on + strandat 3234.594 kb on - strandat 3234.615 kb on + strandat 3234.699 kb on - strand, within MPMX20_03083at 3234.713 kb on - strand, within MPMX20_03083at 3234.719 kb on + strand, within MPMX20_03083at 3234.753 kb on - strand, within MPMX20_03083at 3234.824 kb on - strand, within MPMX20_03083at 3234.831 kb on + strand, within MPMX20_03083at 3234.836 kb on + strand, within MPMX20_03083at 3234.839 kb on - strand, within MPMX20_03083at 3234.887 kb on + strand, within MPMX20_03083at 3234.931 kb on + strand, within MPMX20_03083at 3234.931 kb on + strand, within MPMX20_03083at 3234.939 kb on - strand, within MPMX20_03083at 3234.948 kb on + strand, within MPMX20_03083at 3234.956 kb on - strand, within MPMX20_03083at 3234.973 kb on + strand, within MPMX20_03083at 3234.981 kb on - strand, within MPMX20_03083at 3234.997 kb on + strand, within MPMX20_03083at 3235.115 kb on + strand, within MPMX20_03083at 3235.169 kb on + strand, within MPMX20_03083at 3235.169 kb on + strand, within MPMX20_03083at 3235.174 kb on + strand, within MPMX20_03083at 3235.177 kb on - strand, within MPMX20_03083at 3235.182 kb on - strand, within MPMX20_03083at 3235.381 kb on + strand, within MPMX20_03083

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,231,797 + MPMX20_03081 0.10 +0.1
3,231,805 - MPMX20_03081 0.11 +0.3
3,231,828 - MPMX20_03081 0.14 +0.6
3,231,828 - MPMX20_03081 0.14 +0.9
3,231,828 - MPMX20_03081 0.14 +0.4
3,231,833 - MPMX20_03081 0.14 +0.9
3,231,833 - MPMX20_03081 0.14 -2.3
3,231,833 - MPMX20_03081 0.14 +0.2
3,231,833 - MPMX20_03081 0.14 -1.0
3,231,833 - MPMX20_03081 0.14 +0.3
3,231,833 - MPMX20_03081 0.14 +0.1
3,231,855 + MPMX20_03081 0.16 -1.8
3,231,855 + MPMX20_03081 0.16 +0.6
3,231,855 + MPMX20_03081 0.16 +0.1
3,231,855 + MPMX20_03081 0.16 -0.2
3,231,855 + MPMX20_03081 0.16 +0.6
3,231,855 + MPMX20_03081 0.16 -0.2
3,231,855 + MPMX20_03081 0.16 +0.1
3,231,855 + MPMX20_03081 0.16 -0.7
3,231,855 + MPMX20_03081 0.16 -0.4
3,231,855 + MPMX20_03081 0.16 -1.6
3,231,855 + MPMX20_03081 0.16 -0.7
3,231,855 + MPMX20_03081 0.16 +1.8
3,231,855 + MPMX20_03081 0.16 -0.3
3,231,855 + MPMX20_03081 0.16 -0.2
3,231,855 + MPMX20_03081 0.16 -0.1
3,231,863 - MPMX20_03081 0.17 -0.1
3,231,863 - MPMX20_03081 0.17 +0.6
3,231,863 - MPMX20_03081 0.17 +0.3
3,231,863 - MPMX20_03081 0.17 -0.4
3,231,863 - MPMX20_03081 0.17 -1.1
3,231,863 - MPMX20_03081 0.17 -2.4
3,231,863 - MPMX20_03081 0.17 -2.0
3,231,863 - MPMX20_03081 0.17 +0.4
3,231,863 - MPMX20_03081 0.17 -1.4
3,231,863 - MPMX20_03081 0.17 -0.5
3,231,896 + MPMX20_03081 0.21 -1.0
3,232,048 - MPMX20_03081 0.37 +0.6
3,232,137 + MPMX20_03081 0.47 +1.8
3,232,145 - MPMX20_03081 0.48 +1.3
3,232,184 - MPMX20_03081 0.52 -0.6
3,232,294 + MPMX20_03081 0.64 -0.7
3,232,328 + MPMX20_03081 0.68 -0.9
3,232,336 - MPMX20_03081 0.69 -0.1
3,232,364 - MPMX20_03081 0.72 +1.3
3,232,374 - MPMX20_03081 0.73 +1.9
3,232,417 - MPMX20_03081 0.78 -1.2
3,232,501 - MPMX20_03081 0.87 +0.3
3,232,501 - MPMX20_03081 0.87 -0.6
3,232,552 + -0.6
3,232,576 - -0.9
3,232,653 - +0.7
3,232,703 + +0.1
3,232,799 + +0.7
3,232,844 + +0.1
3,232,881 - -1.4
3,232,927 + +0.1
3,232,927 + -0.5
3,232,927 + +1.3
3,232,935 - -0.1
3,232,935 - -0.1
3,232,935 - +0.8
3,232,935 - +0.0
3,232,935 - +0.7
3,233,051 - MPMX20_03082 0.15 +1.7
3,233,235 + MPMX20_03082 0.25 -0.1
3,233,325 + MPMX20_03082 0.31 +0.5
3,233,333 - MPMX20_03082 0.31 -1.2
3,233,356 + MPMX20_03082 0.32 -0.7
3,233,364 - MPMX20_03082 0.33 +0.5
3,233,407 + MPMX20_03082 0.35 -0.2
3,233,419 + MPMX20_03082 0.36 -0.6
3,233,496 + MPMX20_03082 0.40 +0.1
3,233,496 + MPMX20_03082 0.40 +2.3
3,233,504 - MPMX20_03082 0.41 +0.2
3,233,506 - MPMX20_03082 0.41 -0.1
3,233,645 + MPMX20_03082 0.49 +0.6
3,233,682 + MPMX20_03082 0.51 -1.1
3,233,713 - MPMX20_03082 0.53 -0.6
3,233,752 - MPMX20_03082 0.55 -1.1
3,233,790 - MPMX20_03082 0.57 -0.1
3,233,795 - MPMX20_03082 0.58 +0.2
3,233,822 + MPMX20_03082 0.59 -1.0
3,233,859 - MPMX20_03082 0.61 +1.7
3,233,881 - MPMX20_03082 0.63 +0.6
3,233,882 + MPMX20_03082 0.63 -1.9
3,233,895 - MPMX20_03082 0.64 -1.9
3,233,922 - MPMX20_03082 0.65 -0.8
3,233,955 + MPMX20_03082 0.67 -0.6
3,234,014 - MPMX20_03082 0.70 -0.7
3,234,032 + MPMX20_03082 0.71 -0.1
3,234,032 + MPMX20_03082 0.71 +1.2
3,234,032 + MPMX20_03082 0.71 +2.3
3,234,032 + MPMX20_03082 0.71 +0.3
3,234,032 + MPMX20_03082 0.71 -0.1
3,234,032 + MPMX20_03082 0.71 -0.7
3,234,040 - MPMX20_03082 0.72 -0.1
3,234,040 - MPMX20_03082 0.72 +0.8
3,234,040 - MPMX20_03082 0.72 +0.3
3,234,042 + MPMX20_03082 0.72 -0.3
3,234,104 - MPMX20_03082 0.76 +0.3
3,234,166 - MPMX20_03082 0.79 +0.1
3,234,327 + MPMX20_03082 0.89 +8.8
3,234,335 - MPMX20_03082 0.89 -0.0
3,234,335 - MPMX20_03082 0.89 +0.3
3,234,443 + -2.2
3,234,443 + +1.1
3,234,443 + +0.5
3,234,443 + +0.6
3,234,443 + +0.4
3,234,443 + +0.3
3,234,443 + -0.1
3,234,443 + -0.7
3,234,451 - +0.5
3,234,451 - -0.7
3,234,451 - +1.4
3,234,451 - -1.2
3,234,451 - +0.2
3,234,451 - +0.9
3,234,451 - -0.8
3,234,514 - +0.2
3,234,514 - -1.7
3,234,586 + +0.1
3,234,586 + -0.7
3,234,594 - -0.8
3,234,615 + +0.7
3,234,699 - MPMX20_03083 0.11 +0.0
3,234,713 - MPMX20_03083 0.12 +1.0
3,234,719 + MPMX20_03083 0.13 -0.1
3,234,753 - MPMX20_03083 0.15 -0.3
3,234,824 - MPMX20_03083 0.21 +0.4
3,234,831 + MPMX20_03083 0.21 +1.0
3,234,836 + MPMX20_03083 0.22 +0.3
3,234,839 - MPMX20_03083 0.22 +1.3
3,234,887 + MPMX20_03083 0.25 -0.8
3,234,931 + MPMX20_03083 0.29 -1.7
3,234,931 + MPMX20_03083 0.29 -0.2
3,234,939 - MPMX20_03083 0.29 -1.5
3,234,948 + MPMX20_03083 0.30 -0.4
3,234,956 - MPMX20_03083 0.31 -0.5
3,234,973 + MPMX20_03083 0.32 +0.3
3,234,981 - MPMX20_03083 0.32 +0.4
3,234,997 + MPMX20_03083 0.34 -1.4
3,235,115 + MPMX20_03083 0.42 -0.3
3,235,169 + MPMX20_03083 0.46 -0.0
3,235,169 + MPMX20_03083 0.46 -0.8
3,235,174 + MPMX20_03083 0.47 -1.6
3,235,177 - MPMX20_03083 0.47 -0.9
3,235,182 - MPMX20_03083 0.47 +2.3
3,235,381 + MPMX20_03083 0.62 +0.1

Or see this region's nucleotide sequence