Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02203

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02202 and MPMX20_02203 are separated by 35 nucleotidesMPMX20_02203 and MPMX20_02204 are separated by 289 nucleotides MPMX20_02202: MPMX20_02202 - Type I secretion system membrane fusion protein PrsE, at 2,312,675 to 2,313,850 _02202 MPMX20_02203: MPMX20_02203 - hypothetical protein, at 2,313,886 to 2,314,770 _02203 MPMX20_02204: MPMX20_02204 - hypothetical protein, at 2,315,060 to 2,316,523 _02204 Position (kb) 2313 2314 2315Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2312.892 kb on - strand, within MPMX20_02202at 2312.919 kb on + strand, within MPMX20_02202at 2313.001 kb on + strand, within MPMX20_02202at 2313.072 kb on + strand, within MPMX20_02202at 2313.103 kb on + strand, within MPMX20_02202at 2313.103 kb on + strand, within MPMX20_02202at 2313.103 kb on + strand, within MPMX20_02202at 2313.111 kb on - strand, within MPMX20_02202at 2313.111 kb on - strand, within MPMX20_02202at 2313.111 kb on - strand, within MPMX20_02202at 2313.135 kb on + strand, within MPMX20_02202at 2313.142 kb on - strand, within MPMX20_02202at 2313.143 kb on - strand, within MPMX20_02202at 2313.144 kb on + strand, within MPMX20_02202at 2313.162 kb on + strand, within MPMX20_02202at 2313.164 kb on - strand, within MPMX20_02202at 2313.222 kb on + strand, within MPMX20_02202at 2313.231 kb on - strand, within MPMX20_02202at 2313.232 kb on + strand, within MPMX20_02202at 2313.232 kb on - strand, within MPMX20_02202at 2313.308 kb on + strand, within MPMX20_02202at 2313.337 kb on + strand, within MPMX20_02202at 2313.433 kb on + strand, within MPMX20_02202at 2313.440 kb on + strand, within MPMX20_02202at 2313.449 kb on - strand, within MPMX20_02202at 2313.472 kb on + strand, within MPMX20_02202at 2313.475 kb on + strand, within MPMX20_02202at 2313.480 kb on + strand, within MPMX20_02202at 2313.480 kb on + strand, within MPMX20_02202at 2313.492 kb on - strand, within MPMX20_02202at 2313.492 kb on - strand, within MPMX20_02202at 2313.540 kb on + strand, within MPMX20_02202at 2313.553 kb on - strand, within MPMX20_02202at 2313.563 kb on + strand, within MPMX20_02202at 2313.568 kb on + strand, within MPMX20_02202at 2313.568 kb on + strand, within MPMX20_02202at 2313.581 kb on + strand, within MPMX20_02202at 2313.582 kb on + strand, within MPMX20_02202at 2313.582 kb on + strand, within MPMX20_02202at 2313.582 kb on + strand, within MPMX20_02202at 2313.582 kb on + strand, within MPMX20_02202at 2313.589 kb on - strand, within MPMX20_02202at 2313.589 kb on - strand, within MPMX20_02202at 2313.589 kb on - strand, within MPMX20_02202at 2313.590 kb on - strand, within MPMX20_02202at 2313.590 kb on - strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.605 kb on + strand, within MPMX20_02202at 2313.607 kb on + strand, within MPMX20_02202at 2313.613 kb on + strand, within MPMX20_02202at 2313.642 kb on + strand, within MPMX20_02202at 2313.643 kb on + strand, within MPMX20_02202at 2313.643 kb on + strand, within MPMX20_02202at 2313.644 kb on + strand, within MPMX20_02202at 2313.649 kb on + strand, within MPMX20_02202at 2313.653 kb on + strand, within MPMX20_02202at 2313.655 kb on + strand, within MPMX20_02202at 2313.655 kb on + strand, within MPMX20_02202at 2313.668 kb on + strand, within MPMX20_02202at 2313.675 kb on + strand, within MPMX20_02202at 2313.682 kb on + strand, within MPMX20_02202at 2313.683 kb on + strand, within MPMX20_02202at 2313.683 kb on + strand, within MPMX20_02202at 2313.683 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.698 kb on + strand, within MPMX20_02202at 2313.700 kb on + strand, within MPMX20_02202at 2313.700 kb on + strand, within MPMX20_02202at 2313.700 kb on + strand, within MPMX20_02202at 2313.700 kb on + strand, within MPMX20_02202at 2313.702 kb on + strand, within MPMX20_02202at 2313.702 kb on + strand, within MPMX20_02202at 2313.702 kb on + strand, within MPMX20_02202at 2313.706 kb on + strand, within MPMX20_02202at 2313.706 kb on + strand, within MPMX20_02202at 2313.706 kb on + strand, within MPMX20_02202at 2313.706 kb on + strand, within MPMX20_02202at 2313.707 kb on + strand, within MPMX20_02202at 2313.707 kb on + strand, within MPMX20_02202at 2313.724 kb on + strand, within MPMX20_02202at 2313.724 kb on + strand, within MPMX20_02202at 2313.724 kb on + strand, within MPMX20_02202at 2313.724 kb on + strand, within MPMX20_02202at 2313.754 kb on + strandat 2313.754 kb on + strandat 2313.754 kb on + strandat 2313.812 kb on + strandat 2313.823 kb on + strandat 2313.833 kb on + strandat 2313.850 kb on + strandat 2313.883 kb on + strandat 2313.883 kb on + strandat 2313.883 kb on + strandat 2313.883 kb on + strandat 2313.884 kb on + strandat 2313.884 kb on + strandat 2313.897 kb on + strandat 2313.897 kb on + strandat 2313.911 kb on + strandat 2313.911 kb on + strandat 2313.916 kb on + strandat 2313.940 kb on + strandat 2314.015 kb on + strand, within MPMX20_02203at 2314.027 kb on + strand, within MPMX20_02203at 2314.027 kb on + strand, within MPMX20_02203at 2314.027 kb on + strand, within MPMX20_02203at 2315.150 kb on - strandat 2315.156 kb on - strandat 2315.172 kb on - strandat 2315.177 kb on - strandat 2315.200 kb on + strandat 2315.288 kb on + strand, within MPMX20_02204at 2315.290 kb on + strand, within MPMX20_02204at 2315.298 kb on + strand, within MPMX20_02204at 2315.298 kb on + strand, within MPMX20_02204at 2315.298 kb on + strand, within MPMX20_02204at 2315.298 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.346 kb on + strand, within MPMX20_02204at 2315.351 kb on + strand, within MPMX20_02204at 2315.361 kb on + strand, within MPMX20_02204at 2315.361 kb on + strand, within MPMX20_02204at 2315.375 kb on + strand, within MPMX20_02204at 2315.385 kb on + strand, within MPMX20_02204at 2315.385 kb on + strand, within MPMX20_02204at 2315.385 kb on + strand, within MPMX20_02204at 2315.385 kb on + strand, within MPMX20_02204at 2315.385 kb on + strand, within MPMX20_02204at 2315.385 kb on + strand, within MPMX20_02204

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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2,312,892 - MPMX20_02202 0.18 +1.6
2,312,919 + MPMX20_02202 0.21 -1.0
2,313,001 + MPMX20_02202 0.28 +0.1
2,313,072 + MPMX20_02202 0.34 +0.7
2,313,103 + MPMX20_02202 0.36 -0.8
2,313,103 + MPMX20_02202 0.36 -0.6
2,313,103 + MPMX20_02202 0.36 +0.3
2,313,111 - MPMX20_02202 0.37 +0.6
2,313,111 - MPMX20_02202 0.37 -0.3
2,313,111 - MPMX20_02202 0.37 +1.1
2,313,135 + MPMX20_02202 0.39 -1.4
2,313,142 - MPMX20_02202 0.40 +1.6
2,313,143 - MPMX20_02202 0.40 -1.5
2,313,144 + MPMX20_02202 0.40 -1.3
2,313,162 + MPMX20_02202 0.41 -1.0
2,313,164 - MPMX20_02202 0.42 +0.0
2,313,222 + MPMX20_02202 0.47 -0.3
2,313,231 - MPMX20_02202 0.47 -0.3
2,313,232 + MPMX20_02202 0.47 +1.2
2,313,232 - MPMX20_02202 0.47 +0.3
2,313,308 + MPMX20_02202 0.54 -0.8
2,313,337 + MPMX20_02202 0.56 +0.2
2,313,433 + MPMX20_02202 0.64 -0.4
2,313,440 + MPMX20_02202 0.65 +0.4
2,313,449 - MPMX20_02202 0.66 +2.0
2,313,472 + MPMX20_02202 0.68 +0.3
2,313,475 + MPMX20_02202 0.68 -0.6
2,313,480 + MPMX20_02202 0.68 -1.2
2,313,480 + MPMX20_02202 0.68 +0.2
2,313,492 - MPMX20_02202 0.69 -0.6
2,313,492 - MPMX20_02202 0.69 -1.1
2,313,540 + MPMX20_02202 0.74 +0.8
2,313,553 - MPMX20_02202 0.75 -0.8
2,313,563 + MPMX20_02202 0.76 -0.5
2,313,568 + MPMX20_02202 0.76 -0.1
2,313,568 + MPMX20_02202 0.76 -1.1
2,313,581 + MPMX20_02202 0.77 -1.3
2,313,582 + MPMX20_02202 0.77 -0.8
2,313,582 + MPMX20_02202 0.77 +0.6
2,313,582 + MPMX20_02202 0.77 -1.4
2,313,582 + MPMX20_02202 0.77 +0.5
2,313,589 - MPMX20_02202 0.78 +1.2
2,313,589 - MPMX20_02202 0.78 +2.2
2,313,589 - MPMX20_02202 0.78 -0.6
2,313,590 - MPMX20_02202 0.78 -0.4
2,313,590 - MPMX20_02202 0.78 +0.2
2,313,605 + MPMX20_02202 0.79 -0.6
2,313,605 + MPMX20_02202 0.79 -1.1
2,313,605 + MPMX20_02202 0.79 -1.3
2,313,605 + MPMX20_02202 0.79 +0.3
2,313,605 + MPMX20_02202 0.79 +0.7
2,313,605 + MPMX20_02202 0.79 +0.2
2,313,605 + MPMX20_02202 0.79 +2.2
2,313,605 + MPMX20_02202 0.79 +0.8
2,313,605 + MPMX20_02202 0.79 +0.5
2,313,605 + MPMX20_02202 0.79 +0.3
2,313,607 + MPMX20_02202 0.79 -0.7
2,313,613 + MPMX20_02202 0.80 +1.3
2,313,642 + MPMX20_02202 0.82 +0.1
2,313,643 + MPMX20_02202 0.82 +0.3
2,313,643 + MPMX20_02202 0.82 -0.8
2,313,644 + MPMX20_02202 0.82 -0.8
2,313,649 + MPMX20_02202 0.83 +0.1
2,313,653 + MPMX20_02202 0.83 -1.4
2,313,655 + MPMX20_02202 0.83 +1.2
2,313,655 + MPMX20_02202 0.83 -0.5
2,313,668 + MPMX20_02202 0.84 -0.6
2,313,675 + MPMX20_02202 0.85 +0.9
2,313,682 + MPMX20_02202 0.86 +1.3
2,313,683 + MPMX20_02202 0.86 -0.0
2,313,683 + MPMX20_02202 0.86 -2.0
2,313,683 + MPMX20_02202 0.86 +0.4
2,313,698 + MPMX20_02202 0.87 +1.1
2,313,698 + MPMX20_02202 0.87 -0.3
2,313,698 + MPMX20_02202 0.87 -0.3
2,313,698 + MPMX20_02202 0.87 +0.7
2,313,698 + MPMX20_02202 0.87 -0.2
2,313,698 + MPMX20_02202 0.87 +0.0
2,313,698 + MPMX20_02202 0.87 +0.4
2,313,700 + MPMX20_02202 0.87 -0.4
2,313,700 + MPMX20_02202 0.87 -0.4
2,313,700 + MPMX20_02202 0.87 +0.3
2,313,700 + MPMX20_02202 0.87 -0.4
2,313,702 + MPMX20_02202 0.87 +0.6
2,313,702 + MPMX20_02202 0.87 -1.2
2,313,702 + MPMX20_02202 0.87 +0.5
2,313,706 + MPMX20_02202 0.88 -0.9
2,313,706 + MPMX20_02202 0.88 +0.3
2,313,706 + MPMX20_02202 0.88 +0.3
2,313,706 + MPMX20_02202 0.88 +0.4
2,313,707 + MPMX20_02202 0.88 +0.3
2,313,707 + MPMX20_02202 0.88 +1.1
2,313,724 + MPMX20_02202 0.89 +0.6
2,313,724 + MPMX20_02202 0.89 -1.1
2,313,724 + MPMX20_02202 0.89 -0.8
2,313,724 + MPMX20_02202 0.89 -0.7
2,313,754 + +0.8
2,313,754 + +0.9
2,313,754 + -0.2
2,313,812 + +0.4
2,313,823 + +0.9
2,313,833 + -0.1
2,313,850 + +0.2
2,313,883 + -0.4
2,313,883 + +1.7
2,313,883 + -0.8
2,313,883 + +0.1
2,313,884 + -0.1
2,313,884 + -0.4
2,313,897 + +2.2
2,313,897 + -1.3
2,313,911 + -0.4
2,313,911 + +0.4
2,313,916 + +0.6
2,313,940 + +4.5
2,314,015 + MPMX20_02203 0.15 -1.2
2,314,027 + MPMX20_02203 0.16 -0.6
2,314,027 + MPMX20_02203 0.16 -1.0
2,314,027 + MPMX20_02203 0.16 -0.1
2,315,150 - +0.6
2,315,156 - +1.2
2,315,172 - -0.9
2,315,177 - +0.0
2,315,200 + -0.3
2,315,288 + MPMX20_02204 0.16 +0.0
2,315,290 + MPMX20_02204 0.16 +0.2
2,315,298 + MPMX20_02204 0.16 -0.6
2,315,298 + MPMX20_02204 0.16 +1.2
2,315,298 + MPMX20_02204 0.16 -0.1
2,315,298 + MPMX20_02204 0.16 -0.8
2,315,346 + MPMX20_02204 0.20 -0.5
2,315,346 + MPMX20_02204 0.20 -0.1
2,315,346 + MPMX20_02204 0.20 +0.2
2,315,346 + MPMX20_02204 0.20 +2.6
2,315,346 + MPMX20_02204 0.20 +0.6
2,315,346 + MPMX20_02204 0.20 +1.2
2,315,346 + MPMX20_02204 0.20 -1.4
2,315,346 + MPMX20_02204 0.20 -0.3
2,315,346 + MPMX20_02204 0.20 +0.9
2,315,346 + MPMX20_02204 0.20 -1.1
2,315,346 + MPMX20_02204 0.20 +0.0
2,315,346 + MPMX20_02204 0.20 -1.0
2,315,346 + MPMX20_02204 0.20 -0.6
2,315,346 + MPMX20_02204 0.20 +2.9
2,315,346 + MPMX20_02204 0.20 -0.1
2,315,351 + MPMX20_02204 0.20 -1.6
2,315,361 + MPMX20_02204 0.21 -0.2
2,315,361 + MPMX20_02204 0.21 -0.1
2,315,375 + MPMX20_02204 0.22 +2.7
2,315,385 + MPMX20_02204 0.22 -0.1
2,315,385 + MPMX20_02204 0.22 -0.6
2,315,385 + MPMX20_02204 0.22 +0.6
2,315,385 + MPMX20_02204 0.22 -1.0
2,315,385 + MPMX20_02204 0.22 +1.4
2,315,385 + MPMX20_02204 0.22 -1.6

Or see this region's nucleotide sequence