Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01504

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01502 and MPMX20_01503 are separated by 63 nucleotidesMPMX20_01503 and MPMX20_01504 are separated by 177 nucleotidesMPMX20_01504 and MPMX20_01505 overlap by 1 nucleotidesMPMX20_01505 and MPMX20_01506 are separated by 6 nucleotides MPMX20_01502: MPMX20_01502 - Adaptive-response sensory-kinase SasA, at 1,570,897 to 1,572,363 _01502 MPMX20_01503: MPMX20_01503 - ABC transporter arginine-binding protein 1, at 1,572,427 to 1,573,158 _01503 MPMX20_01504: MPMX20_01504 - Arginine ABC transporter permease protein ArtM, at 1,573,336 to 1,574,004 _01504 MPMX20_01505: MPMX20_01505 - Arginine ABC transporter permease protein ArtQ, at 1,574,004 to 1,574,720 _01505 MPMX20_01506: MPMX20_01506 - Putative ABC transporter arginine-binding protein 2, at 1,574,727 to 1,575,458 _01506 Position (kb) 1573 1574 1575Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1572.358 kb on - strandat 1572.541 kb on + strand, within MPMX20_01503at 1572.541 kb on + strand, within MPMX20_01503at 1572.541 kb on + strand, within MPMX20_01503at 1572.541 kb on + strand, within MPMX20_01503at 1572.541 kb on + strand, within MPMX20_01503at 1572.541 kb on + strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.549 kb on - strand, within MPMX20_01503at 1572.597 kb on + strand, within MPMX20_01503at 1572.605 kb on - strand, within MPMX20_01503at 1572.638 kb on - strand, within MPMX20_01503at 1572.697 kb on + strand, within MPMX20_01503at 1572.705 kb on - strand, within MPMX20_01503at 1572.755 kb on + strand, within MPMX20_01503at 1572.790 kb on - strand, within MPMX20_01503at 1572.842 kb on + strand, within MPMX20_01503at 1572.842 kb on + strand, within MPMX20_01503at 1572.879 kb on + strand, within MPMX20_01503at 1572.887 kb on - strand, within MPMX20_01503at 1572.887 kb on - strand, within MPMX20_01503at 1572.939 kb on + strand, within MPMX20_01503at 1572.948 kb on - strand, within MPMX20_01503at 1572.949 kb on + strand, within MPMX20_01503at 1572.961 kb on - strand, within MPMX20_01503at 1572.961 kb on - strand, within MPMX20_01503at 1573.007 kb on - strand, within MPMX20_01503at 1573.054 kb on + strand, within MPMX20_01503at 1573.191 kb on - strandat 1573.191 kb on - strandat 1573.191 kb on - strandat 1573.369 kb on - strandat 1573.379 kb on - strandat 1573.407 kb on + strand, within MPMX20_01504at 1573.412 kb on + strand, within MPMX20_01504at 1573.415 kb on - strand, within MPMX20_01504at 1573.430 kb on + strand, within MPMX20_01504at 1573.454 kb on - strand, within MPMX20_01504at 1573.454 kb on - strand, within MPMX20_01504at 1573.454 kb on - strand, within MPMX20_01504at 1573.454 kb on - strand, within MPMX20_01504at 1573.460 kb on + strand, within MPMX20_01504at 1573.487 kb on + strand, within MPMX20_01504at 1573.487 kb on + strand, within MPMX20_01504at 1573.487 kb on + strand, within MPMX20_01504at 1573.495 kb on - strand, within MPMX20_01504at 1573.505 kb on + strand, within MPMX20_01504at 1573.505 kb on + strand, within MPMX20_01504at 1573.513 kb on - strand, within MPMX20_01504at 1573.623 kb on + strand, within MPMX20_01504at 1573.636 kb on - strand, within MPMX20_01504at 1573.636 kb on - strand, within MPMX20_01504at 1573.638 kb on + strand, within MPMX20_01504at 1573.647 kb on - strand, within MPMX20_01504at 1573.662 kb on + strand, within MPMX20_01504at 1573.778 kb on + strand, within MPMX20_01504at 1573.791 kb on - strand, within MPMX20_01504at 1573.813 kb on + strand, within MPMX20_01504at 1573.821 kb on - strand, within MPMX20_01504at 1573.838 kb on - strand, within MPMX20_01504at 1573.838 kb on - strand, within MPMX20_01504at 1573.873 kb on - strand, within MPMX20_01504at 1573.873 kb on - strand, within MPMX20_01504at 1573.953 kb on + strandat 1573.953 kb on + strandat 1573.973 kb on + strandat 1573.973 kb on + strandat 1573.974 kb on - strandat 1573.981 kb on - strandat 1573.981 kb on - strandat 1574.014 kb on - strandat 1574.014 kb on - strandat 1574.039 kb on + strandat 1574.039 kb on + strandat 1574.066 kb on - strandat 1574.129 kb on - strand, within MPMX20_01505at 1574.295 kb on + strand, within MPMX20_01505at 1574.295 kb on + strand, within MPMX20_01505at 1574.303 kb on - strand, within MPMX20_01505at 1574.309 kb on - strand, within MPMX20_01505at 1574.323 kb on - strand, within MPMX20_01505at 1574.374 kb on + strand, within MPMX20_01505at 1574.382 kb on - strand, within MPMX20_01505at 1574.476 kb on - strand, within MPMX20_01505at 1574.482 kb on - strand, within MPMX20_01505at 1574.512 kb on - strand, within MPMX20_01505at 1574.568 kb on + strand, within MPMX20_01505at 1574.573 kb on + strand, within MPMX20_01505at 1574.576 kb on - strand, within MPMX20_01505at 1574.578 kb on + strand, within MPMX20_01505at 1574.578 kb on + strand, within MPMX20_01505at 1574.581 kb on - strand, within MPMX20_01505at 1574.621 kb on + strand, within MPMX20_01505at 1574.690 kb on - strandat 1574.700 kb on - strandat 1574.705 kb on - strandat 1574.813 kb on + strand, within MPMX20_01506at 1574.813 kb on + strand, within MPMX20_01506at 1574.818 kb on + strand, within MPMX20_01506at 1574.821 kb on - strand, within MPMX20_01506at 1574.821 kb on - strand, within MPMX20_01506at 1574.821 kb on - strand, within MPMX20_01506at 1574.826 kb on - strand, within MPMX20_01506at 1574.826 kb on - strand, within MPMX20_01506at 1574.834 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.841 kb on + strand, within MPMX20_01506at 1574.844 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.849 kb on - strand, within MPMX20_01506at 1574.859 kb on - strand, within MPMX20_01506at 1574.890 kb on + strand, within MPMX20_01506

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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1,572,358 - -0.9
1,572,541 + MPMX20_01503 0.16 -1.1
1,572,541 + MPMX20_01503 0.16 +1.1
1,572,541 + MPMX20_01503 0.16 +0.5
1,572,541 + MPMX20_01503 0.16 -1.6
1,572,541 + MPMX20_01503 0.16 -1.1
1,572,541 + MPMX20_01503 0.16 -1.0
1,572,549 - MPMX20_01503 0.17 +1.6
1,572,549 - MPMX20_01503 0.17 +1.2
1,572,549 - MPMX20_01503 0.17 +0.9
1,572,549 - MPMX20_01503 0.17 +1.2
1,572,549 - MPMX20_01503 0.17 -0.1
1,572,549 - MPMX20_01503 0.17 -0.1
1,572,549 - MPMX20_01503 0.17 -0.2
1,572,549 - MPMX20_01503 0.17 -1.6
1,572,597 + MPMX20_01503 0.23 +0.2
1,572,605 - MPMX20_01503 0.24 -0.6
1,572,638 - MPMX20_01503 0.29 -1.0
1,572,697 + MPMX20_01503 0.37 -0.2
1,572,705 - MPMX20_01503 0.38 +2.0
1,572,755 + MPMX20_01503 0.45 -0.3
1,572,790 - MPMX20_01503 0.50 +0.9
1,572,842 + MPMX20_01503 0.57 -0.4
1,572,842 + MPMX20_01503 0.57 +1.0
1,572,879 + MPMX20_01503 0.62 +0.9
1,572,887 - MPMX20_01503 0.63 -0.5
1,572,887 - MPMX20_01503 0.63 -1.6
1,572,939 + MPMX20_01503 0.70 -0.0
1,572,948 - MPMX20_01503 0.71 -1.2
1,572,949 + MPMX20_01503 0.71 -1.5
1,572,961 - MPMX20_01503 0.73 +0.2
1,572,961 - MPMX20_01503 0.73 -0.4
1,573,007 - MPMX20_01503 0.79 -0.9
1,573,054 + MPMX20_01503 0.86 -0.3
1,573,191 - -0.8
1,573,191 - -0.6
1,573,191 - +0.2
1,573,369 - -0.7
1,573,379 - -0.2
1,573,407 + MPMX20_01504 0.11 -0.8
1,573,412 + MPMX20_01504 0.11 -0.1
1,573,415 - MPMX20_01504 0.12 +0.4
1,573,430 + MPMX20_01504 0.14 -1.3
1,573,454 - MPMX20_01504 0.18 +0.1
1,573,454 - MPMX20_01504 0.18 -0.8
1,573,454 - MPMX20_01504 0.18 +0.0
1,573,454 - MPMX20_01504 0.18 -2.8
1,573,460 + MPMX20_01504 0.19 +0.9
1,573,487 + MPMX20_01504 0.23 -1.8
1,573,487 + MPMX20_01504 0.23 +1.8
1,573,487 + MPMX20_01504 0.23 -1.1
1,573,495 - MPMX20_01504 0.24 -0.2
1,573,505 + MPMX20_01504 0.25 -1.9
1,573,505 + MPMX20_01504 0.25 -1.2
1,573,513 - MPMX20_01504 0.26 -1.1
1,573,623 + MPMX20_01504 0.43 -1.9
1,573,636 - MPMX20_01504 0.45 -1.9
1,573,636 - MPMX20_01504 0.45 -1.1
1,573,638 + MPMX20_01504 0.45 -1.7
1,573,647 - MPMX20_01504 0.46 -1.1
1,573,662 + MPMX20_01504 0.49 -1.1
1,573,778 + MPMX20_01504 0.66 -2.5
1,573,791 - MPMX20_01504 0.68 -2.5
1,573,813 + MPMX20_01504 0.71 -0.4
1,573,821 - MPMX20_01504 0.72 -0.6
1,573,838 - MPMX20_01504 0.75 -0.8
1,573,838 - MPMX20_01504 0.75 -1.7
1,573,873 - MPMX20_01504 0.80 -1.0
1,573,873 - MPMX20_01504 0.80 -3.4
1,573,953 + -1.5
1,573,953 + -0.6
1,573,973 + -0.7
1,573,973 + +1.0
1,573,974 - -0.7
1,573,981 - -1.4
1,573,981 - -1.1
1,574,014 - -0.4
1,574,014 - -0.9
1,574,039 + -2.0
1,574,039 + +0.0
1,574,066 - -2.2
1,574,129 - MPMX20_01505 0.17 -1.0
1,574,295 + MPMX20_01505 0.41 -1.1
1,574,295 + MPMX20_01505 0.41 +1.0
1,574,303 - MPMX20_01505 0.42 +0.4
1,574,309 - MPMX20_01505 0.43 +0.2
1,574,323 - MPMX20_01505 0.44 -0.1
1,574,374 + MPMX20_01505 0.52 -1.1
1,574,382 - MPMX20_01505 0.53 -0.5
1,574,476 - MPMX20_01505 0.66 +0.1
1,574,482 - MPMX20_01505 0.67 -0.7
1,574,512 - MPMX20_01505 0.71 -2.0
1,574,568 + MPMX20_01505 0.79 -0.9
1,574,573 + MPMX20_01505 0.79 +0.8
1,574,576 - MPMX20_01505 0.80 -0.5
1,574,578 + MPMX20_01505 0.80 -0.8
1,574,578 + MPMX20_01505 0.80 +0.0
1,574,581 - MPMX20_01505 0.80 -1.5
1,574,621 + MPMX20_01505 0.86 -2.6
1,574,690 - -2.9
1,574,700 - -1.1
1,574,705 - -0.5
1,574,813 + MPMX20_01506 0.12 +0.0
1,574,813 + MPMX20_01506 0.12 -1.4
1,574,818 + MPMX20_01506 0.12 -1.4
1,574,821 - MPMX20_01506 0.13 -0.7
1,574,821 - MPMX20_01506 0.13 -2.4
1,574,821 - MPMX20_01506 0.13 -0.6
1,574,826 - MPMX20_01506 0.14 -2.0
1,574,826 - MPMX20_01506 0.14 -1.8
1,574,834 + MPMX20_01506 0.15 -0.4
1,574,841 + MPMX20_01506 0.16 +0.0
1,574,841 + MPMX20_01506 0.16 -2.2
1,574,841 + MPMX20_01506 0.16 -2.0
1,574,841 + MPMX20_01506 0.16 -0.1
1,574,841 + MPMX20_01506 0.16 -0.2
1,574,841 + MPMX20_01506 0.16 -1.1
1,574,844 - MPMX20_01506 0.16 +0.3
1,574,849 - MPMX20_01506 0.17 +0.2
1,574,849 - MPMX20_01506 0.17 -0.9
1,574,849 - MPMX20_01506 0.17 -0.5
1,574,849 - MPMX20_01506 0.17 -1.7
1,574,849 - MPMX20_01506 0.17 +0.6
1,574,859 - MPMX20_01506 0.18 +0.4
1,574,890 + MPMX20_01506 0.22 -1.2

Or see this region's nucleotide sequence