Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01470 and MPMX20_01471 are separated by 45 nucleotides MPMX20_01471 and MPMX20_01472 are separated by 1 nucleotides MPMX20_01472 and MPMX20_01473 are separated by 51 nucleotides
MPMX20_01470: MPMX20_01470 - Glutathione-binding protein GsiB, at 1,540,575 to 1,542,113
_01470
MPMX20_01471: MPMX20_01471 - Glutathione transport system permease protein GsiC, at 1,542,159 to 1,543,079
_01471
MPMX20_01472: MPMX20_01472 - Glutathione transport system permease protein GsiD, at 1,543,081 to 1,543,992
_01472
MPMX20_01473: MPMX20_01473 - Ribosomal protein S12 methylthiotransferase RimO, at 1,544,044 to 1,545,369
_01473
Position (kb)
1543
1544 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1542.326 kb on - strand, within MPMX20_01471 at 1542.343 kb on - strand, within MPMX20_01471 at 1542.380 kb on - strand, within MPMX20_01471 at 1542.394 kb on + strand, within MPMX20_01471 at 1542.394 kb on + strand, within MPMX20_01471 at 1542.394 kb on + strand, within MPMX20_01471 at 1542.464 kb on - strand, within MPMX20_01471 at 1542.494 kb on - strand, within MPMX20_01471 at 1542.551 kb on + strand, within MPMX20_01471 at 1542.551 kb on + strand, within MPMX20_01471 at 1542.559 kb on - strand, within MPMX20_01471 at 1542.559 kb on - strand, within MPMX20_01471 at 1542.561 kb on - strand, within MPMX20_01471 at 1542.625 kb on - strand, within MPMX20_01471 at 1542.630 kb on + strand, within MPMX20_01471 at 1542.633 kb on - strand, within MPMX20_01471 at 1542.638 kb on - strand, within MPMX20_01471 at 1542.664 kb on + strand, within MPMX20_01471 at 1542.680 kb on - strand, within MPMX20_01471 at 1542.698 kb on + strand, within MPMX20_01471 at 1542.725 kb on - strand, within MPMX20_01471 at 1542.789 kb on + strand, within MPMX20_01471 at 1542.793 kb on - strand, within MPMX20_01471 at 1542.811 kb on - strand, within MPMX20_01471 at 1542.850 kb on - strand, within MPMX20_01471 at 1542.908 kb on - strand, within MPMX20_01471 at 1542.912 kb on + strand, within MPMX20_01471 at 1542.912 kb on + strand, within MPMX20_01471 at 1542.920 kb on - strand, within MPMX20_01471 at 1542.954 kb on + strand, within MPMX20_01471 at 1543.040 kb on + strand at 1543.040 kb on + strand at 1543.059 kb on - strand at 1543.323 kb on + strand, within MPMX20_01472 at 1543.499 kb on + strand, within MPMX20_01472 at 1543.580 kb on - strand, within MPMX20_01472 at 1543.599 kb on + strand, within MPMX20_01472 at 1543.682 kb on + strand, within MPMX20_01472 at 1543.682 kb on + strand, within MPMX20_01472 at 1543.682 kb on + strand, within MPMX20_01472 at 1543.690 kb on - strand, within MPMX20_01472 at 1543.690 kb on - strand, within MPMX20_01472 at 1543.705 kb on + strand, within MPMX20_01472 at 1543.715 kb on + strand, within MPMX20_01472 at 1543.725 kb on + strand, within MPMX20_01472 at 1543.764 kb on + strand, within MPMX20_01472 at 1543.934 kb on + strand at 1544.112 kb on + strand at 1544.120 kb on - strand at 1544.277 kb on + strand, within MPMX20_01473 at 1544.300 kb on + strand, within MPMX20_01473 at 1544.300 kb on + strand, within MPMX20_01473 at 1544.308 kb on - strand, within MPMX20_01473 at 1544.383 kb on + strand, within MPMX20_01473 at 1544.383 kb on + strand, within MPMX20_01473 at 1544.383 kb on + strand, within MPMX20_01473 at 1544.383 kb on + strand, within MPMX20_01473 at 1544.383 kb on + strand, within MPMX20_01473 at 1544.391 kb on - strand, within MPMX20_01473 at 1544.391 kb on - strand, within MPMX20_01473 at 1544.391 kb on - strand, within MPMX20_01473 at 1544.454 kb on + strand, within MPMX20_01473 at 1544.481 kb on - strand, within MPMX20_01473 at 1544.509 kb on - strand, within MPMX20_01473 at 1544.548 kb on - strand, within MPMX20_01473 at 1544.633 kb on + strand, within MPMX20_01473 at 1544.740 kb on + strand, within MPMX20_01473 at 1544.806 kb on - strand, within MPMX20_01473 at 1544.816 kb on - strand, within MPMX20_01473 at 1544.825 kb on + strand, within MPMX20_01473 at 1544.842 kb on + strand, within MPMX20_01473 at 1544.856 kb on - strand, within MPMX20_01473 at 1544.892 kb on + strand, within MPMX20_01473 at 1544.892 kb on + strand, within MPMX20_01473 at 1544.900 kb on - strand, within MPMX20_01473 at 1544.906 kb on + strand, within MPMX20_01473 at 1544.914 kb on - strand, within MPMX20_01473
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 remove 1,542,326 - MPMX20_01471 0.18 -1.1 1,542,343 - MPMX20_01471 0.20 -0.7 1,542,380 - MPMX20_01471 0.24 +1.6 1,542,394 + MPMX20_01471 0.26 -2.5 1,542,394 + MPMX20_01471 0.26 -0.5 1,542,394 + MPMX20_01471 0.26 -0.3 1,542,464 - MPMX20_01471 0.33 +4.6 1,542,494 - MPMX20_01471 0.36 -0.1 1,542,551 + MPMX20_01471 0.43 -1.0 1,542,551 + MPMX20_01471 0.43 +0.2 1,542,559 - MPMX20_01471 0.43 +0.2 1,542,559 - MPMX20_01471 0.43 +0.2 1,542,561 - MPMX20_01471 0.44 +0.1 1,542,625 - MPMX20_01471 0.51 -0.4 1,542,630 + MPMX20_01471 0.51 -2.2 1,542,633 - MPMX20_01471 0.51 -0.1 1,542,638 - MPMX20_01471 0.52 -1.7 1,542,664 + MPMX20_01471 0.55 -0.6 1,542,680 - MPMX20_01471 0.57 +1.8 1,542,698 + MPMX20_01471 0.59 +2.2 1,542,725 - MPMX20_01471 0.61 -0.1 1,542,789 + MPMX20_01471 0.68 -0.5 1,542,793 - MPMX20_01471 0.69 -2.0 1,542,811 - MPMX20_01471 0.71 -1.3 1,542,850 - MPMX20_01471 0.75 -1.4 1,542,908 - MPMX20_01471 0.81 +0.5 1,542,912 + MPMX20_01471 0.82 -0.5 1,542,912 + MPMX20_01471 0.82 -0.7 1,542,920 - MPMX20_01471 0.83 -0.4 1,542,954 + MPMX20_01471 0.86 +0.8 1,543,040 + +0.3 1,543,040 + +0.2 1,543,059 - -0.2 1,543,323 + MPMX20_01472 0.27 -1.7 1,543,499 + MPMX20_01472 0.46 -1.1 1,543,580 - MPMX20_01472 0.55 -0.4 1,543,599 + MPMX20_01472 0.57 -0.1 1,543,682 + MPMX20_01472 0.66 -1.9 1,543,682 + MPMX20_01472 0.66 -2.4 1,543,682 + MPMX20_01472 0.66 -2.3 1,543,690 - MPMX20_01472 0.67 -0.6 1,543,690 - MPMX20_01472 0.67 +0.1 1,543,705 + MPMX20_01472 0.68 -0.4 1,543,715 + MPMX20_01472 0.70 -0.6 1,543,725 + MPMX20_01472 0.71 -1.0 1,543,764 + MPMX20_01472 0.75 -1.3 1,543,934 + -0.6 1,544,112 + -1.9 1,544,120 - -0.3 1,544,277 + MPMX20_01473 0.18 -0.2 1,544,300 + MPMX20_01473 0.19 -0.7 1,544,300 + MPMX20_01473 0.19 -1.0 1,544,308 - MPMX20_01473 0.20 -0.4 1,544,383 + MPMX20_01473 0.26 +0.8 1,544,383 + MPMX20_01473 0.26 +1.4 1,544,383 + MPMX20_01473 0.26 -1.0 1,544,383 + MPMX20_01473 0.26 -0.4 1,544,383 + MPMX20_01473 0.26 -0.4 1,544,391 - MPMX20_01473 0.26 -0.7 1,544,391 - MPMX20_01473 0.26 +0.5 1,544,391 - MPMX20_01473 0.26 -1.0 1,544,454 + MPMX20_01473 0.31 -1.8 1,544,481 - MPMX20_01473 0.33 +0.9 1,544,509 - MPMX20_01473 0.35 -0.8 1,544,548 - MPMX20_01473 0.38 -0.3 1,544,633 + MPMX20_01473 0.44 +0.0 1,544,740 + MPMX20_01473 0.52 +3.2 1,544,806 - MPMX20_01473 0.57 -0.2 1,544,816 - MPMX20_01473 0.58 +0.1 1,544,825 + MPMX20_01473 0.59 -2.2 1,544,842 + MPMX20_01473 0.60 -0.7 1,544,856 - MPMX20_01473 0.61 -1.7 1,544,892 + MPMX20_01473 0.64 +1.2 1,544,892 + MPMX20_01473 0.64 -0.9 1,544,900 - MPMX20_01473 0.65 -1.1 1,544,906 + MPMX20_01473 0.65 -0.8 1,544,914 - MPMX20_01473 0.66 -1.4
Or see this region's nucleotide sequence