Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00837

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00836 and MPMX20_00837 are separated by 50 nucleotidesMPMX20_00837 and MPMX20_00838 overlap by 1 nucleotidesMPMX20_00838 and MPMX20_00839 overlap by 4 nucleotides MPMX20_00836: MPMX20_00836 - Ferrichrome outer membrane transporter/phage receptor, at 880,446 to 882,665 _00836 MPMX20_00837: MPMX20_00837 - Iron(3+)-hydroxamate import ATP-binding protein FhuC, at 882,716 to 883,513 _00837 MPMX20_00838: MPMX20_00838 - Iron(3+)-hydroxamate-binding protein FhuD, at 883,513 to 884,403 _00838 MPMX20_00839: MPMX20_00839 - Iron(3+)-hydroxamate import system permease protein FhuB, at 884,400 to 886,382 _00839 Position (kb) 882 883 884Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 881.732 kb on + strand, within MPMX20_00836at 881.732 kb on + strand, within MPMX20_00836at 881.752 kb on + strand, within MPMX20_00836at 881.752 kb on + strand, within MPMX20_00836at 881.752 kb on + strand, within MPMX20_00836at 881.795 kb on - strand, within MPMX20_00836at 881.812 kb on - strand, within MPMX20_00836at 881.837 kb on - strand, within MPMX20_00836at 881.847 kb on + strand, within MPMX20_00836at 881.882 kb on + strand, within MPMX20_00836at 881.890 kb on - strand, within MPMX20_00836at 882.030 kb on + strand, within MPMX20_00836at 882.030 kb on + strand, within MPMX20_00836at 882.039 kb on - strand, within MPMX20_00836at 882.046 kb on + strand, within MPMX20_00836at 882.096 kb on + strand, within MPMX20_00836at 882.096 kb on - strand, within MPMX20_00836at 882.140 kb on - strand, within MPMX20_00836at 882.180 kb on + strand, within MPMX20_00836at 882.197 kb on - strand, within MPMX20_00836at 882.252 kb on - strand, within MPMX20_00836at 882.268 kb on + strand, within MPMX20_00836at 882.288 kb on + strand, within MPMX20_00836at 882.365 kb on - strand, within MPMX20_00836at 882.378 kb on + strand, within MPMX20_00836at 882.378 kb on + strand, within MPMX20_00836at 882.378 kb on + strand, within MPMX20_00836at 882.378 kb on + strand, within MPMX20_00836at 882.386 kb on - strand, within MPMX20_00836at 882.480 kb on + strandat 882.480 kb on + strandat 882.480 kb on + strandat 882.481 kb on + strandat 882.487 kb on - strandat 882.488 kb on - strandat 882.488 kb on - strandat 882.488 kb on - strandat 882.488 kb on - strandat 882.549 kb on - strandat 882.622 kb on - strandat 882.622 kb on - strandat 882.669 kb on + strandat 882.719 kb on - strandat 882.791 kb on - strandat 882.836 kb on + strand, within MPMX20_00837at 883.009 kb on + strand, within MPMX20_00837at 883.009 kb on + strand, within MPMX20_00837at 883.011 kb on + strand, within MPMX20_00837at 883.011 kb on + strand, within MPMX20_00837at 883.017 kb on - strand, within MPMX20_00837at 883.017 kb on - strand, within MPMX20_00837at 883.017 kb on - strand, within MPMX20_00837at 883.038 kb on - strand, within MPMX20_00837at 883.167 kb on - strand, within MPMX20_00837at 883.202 kb on + strand, within MPMX20_00837at 883.207 kb on + strand, within MPMX20_00837at 883.210 kb on - strand, within MPMX20_00837at 883.215 kb on - strand, within MPMX20_00837at 883.220 kb on - strand, within MPMX20_00837at 883.252 kb on - strand, within MPMX20_00837at 883.295 kb on + strand, within MPMX20_00837at 883.308 kb on + strand, within MPMX20_00837at 883.308 kb on + strand, within MPMX20_00837at 883.308 kb on + strand, within MPMX20_00837at 883.325 kb on + strand, within MPMX20_00837at 883.364 kb on - strand, within MPMX20_00837at 883.373 kb on - strand, within MPMX20_00837at 883.385 kb on + strand, within MPMX20_00837at 883.393 kb on - strand, within MPMX20_00837at 883.418 kb on - strand, within MPMX20_00837at 883.452 kb on - strandat 883.525 kb on + strandat 883.616 kb on - strand, within MPMX20_00838at 883.685 kb on - strand, within MPMX20_00838at 883.709 kb on + strand, within MPMX20_00838at 883.724 kb on + strand, within MPMX20_00838at 883.764 kb on - strand, within MPMX20_00838at 883.783 kb on - strand, within MPMX20_00838at 883.833 kb on - strand, within MPMX20_00838at 883.868 kb on + strand, within MPMX20_00838at 883.936 kb on + strand, within MPMX20_00838at 883.949 kb on + strand, within MPMX20_00838at 884.003 kb on + strand, within MPMX20_00838at 884.003 kb on - strand, within MPMX20_00838at 884.108 kb on - strand, within MPMX20_00838at 884.120 kb on + strand, within MPMX20_00838at 884.176 kb on - strand, within MPMX20_00838at 884.215 kb on + strand, within MPMX20_00838at 884.222 kb on + strand, within MPMX20_00838at 884.420 kb on + strandat 884.430 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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881,732 + MPMX20_00836 0.58 -0.2
881,732 + MPMX20_00836 0.58 -1.2
881,752 + MPMX20_00836 0.59 -1.0
881,752 + MPMX20_00836 0.59 -0.8
881,752 + MPMX20_00836 0.59 +0.3
881,795 - MPMX20_00836 0.61 +0.4
881,812 - MPMX20_00836 0.62 -0.8
881,837 - MPMX20_00836 0.63 -1.2
881,847 + MPMX20_00836 0.63 -1.8
881,882 + MPMX20_00836 0.65 +1.0
881,890 - MPMX20_00836 0.65 -2.1
882,030 + MPMX20_00836 0.71 -0.6
882,030 + MPMX20_00836 0.71 +0.0
882,039 - MPMX20_00836 0.72 -0.8
882,046 + MPMX20_00836 0.72 -0.1
882,096 + MPMX20_00836 0.74 +1.0
882,096 - MPMX20_00836 0.74 -0.9
882,140 - MPMX20_00836 0.76 -0.4
882,180 + MPMX20_00836 0.78 -0.5
882,197 - MPMX20_00836 0.79 -0.4
882,252 - MPMX20_00836 0.81 -1.0
882,268 + MPMX20_00836 0.82 -0.1
882,288 + MPMX20_00836 0.83 +0.5
882,365 - MPMX20_00836 0.86 -0.0
882,378 + MPMX20_00836 0.87 -0.7
882,378 + MPMX20_00836 0.87 -1.2
882,378 + MPMX20_00836 0.87 +0.6
882,378 + MPMX20_00836 0.87 -1.0
882,386 - MPMX20_00836 0.87 -0.2
882,480 + -0.2
882,480 + -0.4
882,480 + -1.5
882,481 + -1.3
882,487 - -0.8
882,488 - +0.4
882,488 - -0.3
882,488 - -1.2
882,488 - -1.7
882,549 - -0.2
882,622 - -1.2
882,622 - -1.4
882,669 + -1.4
882,719 - +0.2
882,791 - +0.4
882,836 + MPMX20_00837 0.15 -2.7
883,009 + MPMX20_00837 0.37 +0.5
883,009 + MPMX20_00837 0.37 -0.7
883,011 + MPMX20_00837 0.37 -0.1
883,011 + MPMX20_00837 0.37 -0.6
883,017 - MPMX20_00837 0.38 +0.3
883,017 - MPMX20_00837 0.38 +0.6
883,017 - MPMX20_00837 0.38 -1.4
883,038 - MPMX20_00837 0.40 +0.1
883,167 - MPMX20_00837 0.57 -1.8
883,202 + MPMX20_00837 0.61 -1.0
883,207 + MPMX20_00837 0.62 -1.7
883,210 - MPMX20_00837 0.62 -1.5
883,215 - MPMX20_00837 0.63 +2.2
883,220 - MPMX20_00837 0.63 -0.7
883,252 - MPMX20_00837 0.67 -2.1
883,295 + MPMX20_00837 0.73 -0.6
883,308 + MPMX20_00837 0.74 -2.4
883,308 + MPMX20_00837 0.74 -2.4
883,308 + MPMX20_00837 0.74 -1.1
883,325 + MPMX20_00837 0.76 -1.1
883,364 - MPMX20_00837 0.81 -0.8
883,373 - MPMX20_00837 0.82 +1.2
883,385 + MPMX20_00837 0.84 -1.1
883,393 - MPMX20_00837 0.85 -0.6
883,418 - MPMX20_00837 0.88 -1.6
883,452 - -2.0
883,525 + -1.1
883,616 - MPMX20_00838 0.12 -1.1
883,685 - MPMX20_00838 0.19 -1.0
883,709 + MPMX20_00838 0.22 +0.6
883,724 + MPMX20_00838 0.24 -0.1
883,764 - MPMX20_00838 0.28 -1.7
883,783 - MPMX20_00838 0.30 -0.1
883,833 - MPMX20_00838 0.36 +0.4
883,868 + MPMX20_00838 0.40 +0.6
883,936 + MPMX20_00838 0.47 -0.6
883,949 + MPMX20_00838 0.49 -1.3
884,003 + MPMX20_00838 0.55 +0.3
884,003 - MPMX20_00838 0.55 -2.7
884,108 - MPMX20_00838 0.67 -0.6
884,120 + MPMX20_00838 0.68 -0.7
884,176 - MPMX20_00838 0.74 +0.2
884,215 + MPMX20_00838 0.79 +0.6
884,222 + MPMX20_00838 0.80 -3.5
884,420 + +0.3
884,430 + -0.2

Or see this region's nucleotide sequence