Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00794

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00791 and MPMX20_00792 are separated by 57 nucleotidesMPMX20_00792 and MPMX20_00793 are separated by 1 nucleotidesMPMX20_00793 and MPMX20_00794 are separated by 9 nucleotidesMPMX20_00794 and MPMX20_00795 overlap by 1 nucleotidesMPMX20_00795 and MPMX20_00796 are separated by 228 nucleotides MPMX20_00791: MPMX20_00791 - Protein translocase subunit SecA, at 827,408 to 830,113 _00791 MPMX20_00792: MPMX20_00792 - 8-oxo-dGTP diphosphatase, at 830,171 to 830,563 _00792 MPMX20_00793: MPMX20_00793 - DNA gyrase inhibitor YacG, at 830,565 to 830,759 _00793 MPMX20_00794: MPMX20_00794 - Cell division protein ZapD, at 830,769 to 831,512 _00794 MPMX20_00795: MPMX20_00795 - Dephospho-CoA kinase, at 831,512 to 832,132 _00795 MPMX20_00796: MPMX20_00796 - GMP reductase, at 832,361 to 833,404 _00796 Position (kb) 830 831 832Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 829.873 kb on + strandat 829.900 kb on - strandat 829.981 kb on + strandat 830.035 kb on + strandat 830.089 kb on + strandat 830.323 kb on - strand, within MPMX20_00792at 830.364 kb on - strand, within MPMX20_00792at 830.369 kb on - strand, within MPMX20_00792at 830.414 kb on + strand, within MPMX20_00792at 830.415 kb on - strand, within MPMX20_00792at 830.419 kb on + strand, within MPMX20_00792at 830.426 kb on - strand, within MPMX20_00792at 830.455 kb on + strand, within MPMX20_00792at 830.458 kb on - strand, within MPMX20_00792at 830.481 kb on + strand, within MPMX20_00792at 830.544 kb on + strandat 830.581 kb on - strandat 830.585 kb on + strand, within MPMX20_00793at 830.585 kb on + strand, within MPMX20_00793at 830.593 kb on - strand, within MPMX20_00793at 830.603 kb on - strand, within MPMX20_00793at 830.677 kb on - strand, within MPMX20_00793at 830.711 kb on - strand, within MPMX20_00793at 830.745 kb on + strandat 830.767 kb on + strandat 830.768 kb on + strandat 830.776 kb on - strandat 830.781 kb on - strandat 830.783 kb on + strandat 830.875 kb on + strand, within MPMX20_00794at 830.899 kb on + strand, within MPMX20_00794at 830.910 kb on + strand, within MPMX20_00794at 830.923 kb on - strand, within MPMX20_00794at 830.929 kb on + strand, within MPMX20_00794at 831.025 kb on + strand, within MPMX20_00794at 831.090 kb on + strand, within MPMX20_00794at 831.275 kb on - strand, within MPMX20_00794at 831.285 kb on + strand, within MPMX20_00794at 831.293 kb on - strand, within MPMX20_00794at 831.387 kb on + strand, within MPMX20_00794at 831.546 kb on - strandat 831.548 kb on + strandat 831.548 kb on + strandat 831.549 kb on + strandat 831.557 kb on - strandat 831.557 kb on - strandat 832.122 kb on + strandat 832.210 kb on - strandat 832.243 kb on + strandat 832.251 kb on - strandat 832.251 kb on - strandat 832.274 kb on + strandat 832.282 kb on - strandat 832.282 kb on - strandat 832.296 kb on - strandat 832.296 kb on - strandat 832.296 kb on - strandat 832.296 kb on - strandat 832.317 kb on - strandat 832.345 kb on + strandat 832.345 kb on + strandat 832.345 kb on - strandat 832.355 kb on - strandat 832.360 kb on - strandat 832.365 kb on - strandat 832.374 kb on - strandat 832.376 kb on + strandat 832.419 kb on + strandat 832.475 kb on - strand, within MPMX20_00796at 832.475 kb on - strand, within MPMX20_00796at 832.475 kb on - strand, within MPMX20_00796at 832.475 kb on - strand, within MPMX20_00796at 832.481 kb on + strand, within MPMX20_00796at 832.486 kb on + strand, within MPMX20_00796at 832.486 kb on + strand, within MPMX20_00796at 832.486 kb on + strand, within MPMX20_00796at 832.489 kb on - strand, within MPMX20_00796at 832.491 kb on + strand, within MPMX20_00796at 832.494 kb on - strand, within MPMX20_00796at 832.499 kb on - strand, within MPMX20_00796

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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829,873 + +1.9
829,900 - -0.4
829,981 + +2.2
830,035 + +0.6
830,089 + -1.4
830,323 - MPMX20_00792 0.39 -2.4
830,364 - MPMX20_00792 0.49 +0.3
830,369 - MPMX20_00792 0.50 +0.4
830,414 + MPMX20_00792 0.62 -1.7
830,415 - MPMX20_00792 0.62 +0.0
830,419 + MPMX20_00792 0.63 -0.6
830,426 - MPMX20_00792 0.65 -2.4
830,455 + MPMX20_00792 0.72 -1.8
830,458 - MPMX20_00792 0.73 -2.2
830,481 + MPMX20_00792 0.79 -0.1
830,544 + +0.2
830,581 - +2.2
830,585 + MPMX20_00793 0.10 +0.1
830,585 + MPMX20_00793 0.10 +0.2
830,593 - MPMX20_00793 0.14 +2.6
830,603 - MPMX20_00793 0.19 -0.6
830,677 - MPMX20_00793 0.57 -0.5
830,711 - MPMX20_00793 0.75 -1.1
830,745 + +1.1
830,767 + +0.3
830,768 + -0.7
830,776 - +0.6
830,781 - -0.9
830,783 + -0.9
830,875 + MPMX20_00794 0.14 -0.6
830,899 + MPMX20_00794 0.17 -1.2
830,910 + MPMX20_00794 0.19 -1.0
830,923 - MPMX20_00794 0.21 -1.0
830,929 + MPMX20_00794 0.22 +0.2
831,025 + MPMX20_00794 0.34 -0.6
831,090 + MPMX20_00794 0.43 -1.4
831,275 - MPMX20_00794 0.68 -1.9
831,285 + MPMX20_00794 0.69 -0.9
831,293 - MPMX20_00794 0.70 -1.7
831,387 + MPMX20_00794 0.83 -0.1
831,546 - -0.5
831,548 + +0.8
831,548 + -0.8
831,549 + -0.0
831,557 - -0.4
831,557 - -1.5
832,122 + -1.2
832,210 - +0.1
832,243 + +0.6
832,251 - +0.9
832,251 - -0.2
832,274 + +0.6
832,282 - +1.5
832,282 - -0.6
832,296 - -0.1
832,296 - -1.1
832,296 - +1.2
832,296 - -0.8
832,317 - -1.1
832,345 + -0.8
832,345 + -0.7
832,345 - +0.3
832,355 - -2.8
832,360 - -1.5
832,365 - -0.2
832,374 - -0.8
832,376 + -2.2
832,419 + +0.2
832,475 - MPMX20_00796 0.11 +0.8
832,475 - MPMX20_00796 0.11 -0.1
832,475 - MPMX20_00796 0.11 -0.8
832,475 - MPMX20_00796 0.11 +0.1
832,481 + MPMX20_00796 0.11 -0.4
832,486 + MPMX20_00796 0.12 +0.9
832,486 + MPMX20_00796 0.12 -0.1
832,486 + MPMX20_00796 0.12 -0.8
832,489 - MPMX20_00796 0.12 +1.9
832,491 + MPMX20_00796 0.12 -1.4
832,494 - MPMX20_00796 0.13 +1.2
832,499 - MPMX20_00796 0.13 +1.1

Or see this region's nucleotide sequence