Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00115

Experiment: TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00114 and MPMX20_00115 are separated by 215 nucleotidesMPMX20_00115 and MPMX20_00116 are separated by 9 nucleotides MPMX20_00114: MPMX20_00114 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 115,081 to 116,013 _00114 MPMX20_00115: MPMX20_00115 - 2-amino-3-ketobutyrate coenzyme A ligase, at 116,229 to 117,425 _00115 MPMX20_00116: MPMX20_00116 - L-threonine 3-dehydrogenase, at 117,435 to 118,460 _00116 Position (kb) 116 117 118Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 116.098 kb on - strandat 116.113 kb on + strandat 116.113 kb on + strandat 116.113 kb on + strandat 116.113 kb on + strandat 116.113 kb on + strandat 116.119 kb on + strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.121 kb on - strandat 116.128 kb on - strandat 116.152 kb on + strandat 116.183 kb on + strandat 116.183 kb on + strandat 116.183 kb on + strandat 116.191 kb on - strandat 116.191 kb on - strandat 116.191 kb on - strandat 116.252 kb on + strandat 116.258 kb on - strandat 116.289 kb on - strandat 116.291 kb on + strandat 116.299 kb on - strandat 116.309 kb on + strandat 116.339 kb on - strandat 116.386 kb on - strand, within MPMX20_00115at 116.401 kb on + strand, within MPMX20_00115at 116.401 kb on + strand, within MPMX20_00115at 116.406 kb on + strand, within MPMX20_00115at 116.465 kb on - strand, within MPMX20_00115at 116.481 kb on + strand, within MPMX20_00115at 116.489 kb on - strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.491 kb on + strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.499 kb on - strand, within MPMX20_00115at 116.524 kb on - strand, within MPMX20_00115at 116.544 kb on + strand, within MPMX20_00115at 116.546 kb on + strand, within MPMX20_00115at 116.582 kb on + strand, within MPMX20_00115at 116.590 kb on - strand, within MPMX20_00115at 116.599 kb on + strand, within MPMX20_00115at 116.607 kb on - strand, within MPMX20_00115at 116.607 kb on - strand, within MPMX20_00115at 116.607 kb on - strand, within MPMX20_00115at 116.630 kb on + strand, within MPMX20_00115at 116.633 kb on - strand, within MPMX20_00115at 116.638 kb on - strand, within MPMX20_00115at 116.653 kb on + strand, within MPMX20_00115at 116.663 kb on + strand, within MPMX20_00115at 116.663 kb on + strand, within MPMX20_00115at 116.663 kb on + strand, within MPMX20_00115at 116.671 kb on - strand, within MPMX20_00115at 116.684 kb on - strand, within MPMX20_00115at 116.804 kb on + strand, within MPMX20_00115at 116.804 kb on + strand, within MPMX20_00115at 116.804 kb on + strand, within MPMX20_00115at 116.804 kb on + strand, within MPMX20_00115at 116.804 kb on + strand, within MPMX20_00115at 116.812 kb on - strand, within MPMX20_00115at 116.812 kb on - strand, within MPMX20_00115at 116.812 kb on - strand, within MPMX20_00115at 116.831 kb on + strand, within MPMX20_00115at 116.846 kb on + strand, within MPMX20_00115at 116.854 kb on - strand, within MPMX20_00115at 116.912 kb on - strand, within MPMX20_00115at 116.944 kb on - strand, within MPMX20_00115at 116.954 kb on + strand, within MPMX20_00115at 116.969 kb on - strand, within MPMX20_00115at 116.974 kb on - strand, within MPMX20_00115at 116.989 kb on - strand, within MPMX20_00115at 117.049 kb on - strand, within MPMX20_00115at 117.107 kb on + strand, within MPMX20_00115at 117.107 kb on + strand, within MPMX20_00115at 117.120 kb on - strand, within MPMX20_00115at 117.188 kb on + strand, within MPMX20_00115at 117.314 kb on - strandat 117.315 kb on + strandat 117.358 kb on - strandat 117.378 kb on + strandat 117.378 kb on - strandat 117.386 kb on - strandat 117.386 kb on - strandat 117.386 kb on - strandat 117.392 kb on - strandat 117.393 kb on - strandat 117.407 kb on + strandat 117.418 kb on - strandat 117.432 kb on - strandat 117.572 kb on - strand, within MPMX20_00116at 117.641 kb on + strand, within MPMX20_00116at 117.674 kb on - strand, within MPMX20_00116at 117.694 kb on - strand, within MPMX20_00116at 117.701 kb on - strand, within MPMX20_00116at 117.755 kb on - strand, within MPMX20_00116at 117.755 kb on - strand, within MPMX20_00116at 117.774 kb on + strand, within MPMX20_00116at 117.774 kb on + strand, within MPMX20_00116at 117.774 kb on + strand, within MPMX20_00116at 117.782 kb on - strand, within MPMX20_00116at 117.911 kb on - strand, within MPMX20_00116at 117.918 kb on - strand, within MPMX20_00116at 117.980 kb on + strand, within MPMX20_00116at 118.064 kb on - strand, within MPMX20_00116at 118.140 kb on + strand, within MPMX20_00116at 118.141 kb on + strand, within MPMX20_00116at 118.141 kb on + strand, within MPMX20_00116at 118.179 kb on + strand, within MPMX20_00116at 118.187 kb on - strand, within MPMX20_00116at 118.260 kb on - strand, within MPMX20_00116at 118.265 kb on + strand, within MPMX20_00116at 118.280 kb on + strand, within MPMX20_00116at 118.305 kb on - strand, within MPMX20_00116at 118.325 kb on - strand, within MPMX20_00116at 118.347 kb on + strand, within MPMX20_00116at 118.347 kb on + strand, within MPMX20_00116at 118.348 kb on + strand, within MPMX20_00116at 118.355 kb on - strand, within MPMX20_00116at 118.355 kb on - strand, within MPMX20_00116at 118.356 kb on - strand, within MPMX20_00116at 118.402 kb on - strandat 118.405 kb on + strandat 118.405 kb on + strandat 118.425 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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116,098 - -0.7
116,113 + +1.3
116,113 + +2.1
116,113 + +1.0
116,113 + +0.3
116,113 + -0.5
116,119 + +0.2
116,121 - -1.6
116,121 - +1.3
116,121 - +1.4
116,121 - +0.3
116,121 - -0.4
116,121 - -1.1
116,121 - -0.1
116,121 - +2.3
116,121 - -0.1
116,128 - +0.3
116,152 + -0.9
116,183 + +0.5
116,183 + +0.9
116,183 + +1.0
116,191 - +0.7
116,191 - +0.3
116,191 - -0.9
116,252 + -0.6
116,258 - -2.5
116,289 - -1.2
116,291 + -0.1
116,299 - -2.4
116,309 + +0.5
116,339 - -1.3
116,386 - MPMX20_00115 0.13 -0.3
116,401 + MPMX20_00115 0.14 +0.5
116,401 + MPMX20_00115 0.14 -0.3
116,406 + MPMX20_00115 0.15 -1.1
116,465 - MPMX20_00115 0.20 +2.3
116,481 + MPMX20_00115 0.21 -0.6
116,489 - MPMX20_00115 0.22 -0.6
116,491 + MPMX20_00115 0.22 -1.4
116,491 + MPMX20_00115 0.22 -0.8
116,491 + MPMX20_00115 0.22 -1.3
116,491 + MPMX20_00115 0.22 +0.4
116,491 + MPMX20_00115 0.22 -0.4
116,491 + MPMX20_00115 0.22 +0.9
116,491 + MPMX20_00115 0.22 -1.2
116,491 + MPMX20_00115 0.22 +0.0
116,499 - MPMX20_00115 0.23 -0.1
116,499 - MPMX20_00115 0.23 -0.5
116,499 - MPMX20_00115 0.23 -0.8
116,499 - MPMX20_00115 0.23 -0.9
116,499 - MPMX20_00115 0.23 +0.7
116,499 - MPMX20_00115 0.23 -1.5
116,499 - MPMX20_00115 0.23 +2.3
116,499 - MPMX20_00115 0.23 +0.9
116,524 - MPMX20_00115 0.25 +0.1
116,544 + MPMX20_00115 0.26 -1.5
116,546 + MPMX20_00115 0.26 -2.6
116,582 + MPMX20_00115 0.29 -2.7
116,590 - MPMX20_00115 0.30 +0.7
116,599 + MPMX20_00115 0.31 -2.2
116,607 - MPMX20_00115 0.32 -2.0
116,607 - MPMX20_00115 0.32 -2.8
116,607 - MPMX20_00115 0.32 -0.9
116,630 + MPMX20_00115 0.34 -1.3
116,633 - MPMX20_00115 0.34 -2.9
116,638 - MPMX20_00115 0.34 -0.1
116,653 + MPMX20_00115 0.35 +0.3
116,663 + MPMX20_00115 0.36 -1.5
116,663 + MPMX20_00115 0.36 -2.4
116,663 + MPMX20_00115 0.36 -1.8
116,671 - MPMX20_00115 0.37 -0.9
116,684 - MPMX20_00115 0.38 +0.9
116,804 + MPMX20_00115 0.48 -2.1
116,804 + MPMX20_00115 0.48 -0.2
116,804 + MPMX20_00115 0.48 -0.9
116,804 + MPMX20_00115 0.48 +1.3
116,804 + MPMX20_00115 0.48 -1.7
116,812 - MPMX20_00115 0.49 -1.2
116,812 - MPMX20_00115 0.49 +1.3
116,812 - MPMX20_00115 0.49 -1.0
116,831 + MPMX20_00115 0.50 -1.8
116,846 + MPMX20_00115 0.52 -1.5
116,854 - MPMX20_00115 0.52 -0.5
116,912 - MPMX20_00115 0.57 -0.1
116,944 - MPMX20_00115 0.60 -1.7
116,954 + MPMX20_00115 0.61 +1.3
116,969 - MPMX20_00115 0.62 -1.2
116,974 - MPMX20_00115 0.62 -1.8
116,989 - MPMX20_00115 0.63 -1.3
117,049 - MPMX20_00115 0.69 +1.6
117,107 + MPMX20_00115 0.73 -0.5
117,107 + MPMX20_00115 0.73 -2.7
117,120 - MPMX20_00115 0.74 +0.7
117,188 + MPMX20_00115 0.80 +2.3
117,314 - -1.8
117,315 + -2.1
117,358 - -0.7
117,378 + -0.0
117,378 - -0.9
117,386 - +0.9
117,386 - -1.1
117,386 - -2.8
117,392 - -1.9
117,393 - -2.2
117,407 + -0.4
117,418 - -0.1
117,432 - -0.5
117,572 - MPMX20_00116 0.13 -2.7
117,641 + MPMX20_00116 0.20 +0.7
117,674 - MPMX20_00116 0.23 -0.3
117,694 - MPMX20_00116 0.25 -0.1
117,701 - MPMX20_00116 0.26 -0.1
117,755 - MPMX20_00116 0.31 -0.8
117,755 - MPMX20_00116 0.31 -0.1
117,774 + MPMX20_00116 0.33 -0.7
117,774 + MPMX20_00116 0.33 -0.7
117,774 + MPMX20_00116 0.33 -1.5
117,782 - MPMX20_00116 0.34 -1.1
117,911 - MPMX20_00116 0.46 -1.1
117,918 - MPMX20_00116 0.47 -1.4
117,980 + MPMX20_00116 0.53 -1.6
118,064 - MPMX20_00116 0.61 -1.4
118,140 + MPMX20_00116 0.69 -2.4
118,141 + MPMX20_00116 0.69 -0.6
118,141 + MPMX20_00116 0.69 -0.4
118,179 + MPMX20_00116 0.73 -1.0
118,187 - MPMX20_00116 0.73 -2.2
118,260 - MPMX20_00116 0.80 +0.4
118,265 + MPMX20_00116 0.81 +0.3
118,280 + MPMX20_00116 0.82 -0.1
118,305 - MPMX20_00116 0.85 -1.5
118,325 - MPMX20_00116 0.87 -1.7
118,347 + MPMX20_00116 0.89 -0.9
118,347 + MPMX20_00116 0.89 -1.2
118,348 + MPMX20_00116 0.89 -0.7
118,355 - MPMX20_00116 0.90 -1.4
118,355 - MPMX20_00116 0.90 -0.4
118,356 - MPMX20_00116 0.90 -2.3
118,402 - -0.1
118,405 + +2.3
118,405 + +0.3
118,425 + +0.2

Or see this region's nucleotide sequence