Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04685

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_04684 and MPMX20_04685 are separated by 301 nucleotidesMPMX20_04685 and MPMX20_04686 are separated by 131 nucleotidesMPMX20_04686 and MPMX20_04687 are separated by 331 nucleotides MPMX20_04684: MPMX20_04684 - hypothetical protein, at 37,873 to 38,736 _04684 MPMX20_04685: MPMX20_04685 - hypothetical protein, at 39,038 to 39,280 _04685 MPMX20_04686: MPMX20_04686 - Phospholipase D, at 39,412 to 39,792 _04686 MPMX20_04687: MPMX20_04687 - hypothetical protein, at 40,124 to 40,465 _04687 Position (kb) 39 40Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 38.045 kb on - strand, within MPMX20_04684at 38.048 kb on - strand, within MPMX20_04684at 38.063 kb on - strand, within MPMX20_04684at 38.085 kb on - strand, within MPMX20_04684at 38.106 kb on + strand, within MPMX20_04684at 38.162 kb on + strand, within MPMX20_04684at 38.259 kb on - strand, within MPMX20_04684at 38.274 kb on - strand, within MPMX20_04684at 38.277 kb on + strand, within MPMX20_04684at 38.279 kb on - strand, within MPMX20_04684at 38.298 kb on + strand, within MPMX20_04684at 38.306 kb on - strand, within MPMX20_04684at 38.306 kb on - strand, within MPMX20_04684at 38.320 kb on + strand, within MPMX20_04684at 38.328 kb on - strand, within MPMX20_04684at 38.328 kb on - strand, within MPMX20_04684at 38.332 kb on - strand, within MPMX20_04684at 38.397 kb on + strand, within MPMX20_04684at 38.405 kb on - strand, within MPMX20_04684at 38.405 kb on - strand, within MPMX20_04684at 38.450 kb on - strand, within MPMX20_04684at 38.455 kb on + strand, within MPMX20_04684at 38.478 kb on + strand, within MPMX20_04684at 38.498 kb on + strand, within MPMX20_04684at 38.508 kb on - strand, within MPMX20_04684at 38.527 kb on + strand, within MPMX20_04684at 38.552 kb on + strand, within MPMX20_04684at 38.552 kb on + strand, within MPMX20_04684at 38.552 kb on + strand, within MPMX20_04684at 38.560 kb on - strand, within MPMX20_04684at 38.569 kb on + strand, within MPMX20_04684at 38.605 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.631 kb on + strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.639 kb on - strand, within MPMX20_04684at 38.661 kb on - strandat 38.661 kb on - strandat 38.730 kb on + strandat 38.810 kb on + strandat 38.810 kb on + strandat 38.816 kb on - strandat 38.816 kb on - strandat 38.830 kb on - strandat 38.830 kb on - strandat 38.836 kb on + strandat 38.844 kb on - strandat 38.846 kb on - strandat 38.853 kb on - strandat 38.853 kb on - strandat 38.867 kb on - strandat 38.964 kb on - strandat 38.967 kb on + strandat 39.057 kb on + strandat 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.070 kb on + strand, within MPMX20_04685at 39.078 kb on - strand, within MPMX20_04685at 39.078 kb on - strand, within MPMX20_04685at 39.078 kb on - strand, within MPMX20_04685at 39.101 kb on - strand, within MPMX20_04685at 39.119 kb on + strand, within MPMX20_04685at 39.124 kb on - strand, within MPMX20_04685at 39.205 kb on + strand, within MPMX20_04685at 39.213 kb on - strand, within MPMX20_04685at 39.213 kb on - strand, within MPMX20_04685at 39.213 kb on - strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.219 kb on + strand, within MPMX20_04685at 39.227 kb on - strand, within MPMX20_04685at 39.289 kb on + strandat 39.289 kb on + strandat 39.289 kb on + strandat 39.295 kb on + strandat 39.320 kb on + strandat 39.328 kb on - strandat 39.377 kb on - strandat 39.377 kb on - strandat 39.383 kb on - strandat 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.478 kb on + strand, within MPMX20_04686at 39.514 kb on + strand, within MPMX20_04686at 39.546 kb on + strand, within MPMX20_04686at 39.561 kb on + strand, within MPMX20_04686at 39.622 kb on - strand, within MPMX20_04686at 39.622 kb on - strand, within MPMX20_04686at 39.630 kb on + strand, within MPMX20_04686at 39.663 kb on - strand, within MPMX20_04686at 39.687 kb on + strand, within MPMX20_04686at 39.692 kb on + strand, within MPMX20_04686at 39.695 kb on - strand, within MPMX20_04686at 39.716 kb on + strand, within MPMX20_04686at 39.719 kb on - strand, within MPMX20_04686at 39.719 kb on - strand, within MPMX20_04686at 39.723 kb on + strand, within MPMX20_04686at 39.723 kb on + strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.724 kb on - strand, within MPMX20_04686at 39.731 kb on - strand, within MPMX20_04686at 39.760 kb on + strandat 39.765 kb on + strandat 39.765 kb on + strandat 39.768 kb on - strandat 39.768 kb on - strandat 39.781 kb on + strandat 39.782 kb on + strandat 39.790 kb on - strandat 39.796 kb on - strandat 39.807 kb on + strandat 39.807 kb on - strandat 39.832 kb on - strandat 39.835 kb on + strandat 39.843 kb on + strandat 39.843 kb on + strandat 39.843 kb on + strandat 39.843 kb on + strandat 39.845 kb on + strandat 39.851 kb on - strandat 39.851 kb on - strandat 39.851 kb on - strandat 39.892 kb on - strandat 39.892 kb on - strandat 39.905 kb on - strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.912 kb on + strandat 39.917 kb on + strandat 39.920 kb on - strandat 39.920 kb on - strandat 39.920 kb on - strandat 39.921 kb on - strandat 39.939 kb on - strandat 39.962 kb on + strandat 40.005 kb on - strandat 40.014 kb on - strandat 40.045 kb on + strandat 40.050 kb on + strandat 40.058 kb on - strandat 40.058 kb on - strandat 40.058 kb on - strandat 40.063 kb on + strandat 40.063 kb on + strandat 40.072 kb on + strandat 40.089 kb on + strandat 40.094 kb on + strandat 40.102 kb on + strandat 40.102 kb on - strandat 40.131 kb on - strandat 40.131 kb on - strandat 40.136 kb on - strandat 40.146 kb on - strandat 40.152 kb on + strandat 40.152 kb on + strandat 40.168 kb on + strand, within MPMX20_04687at 40.168 kb on + strand, within MPMX20_04687at 40.197 kb on - strand, within MPMX20_04687at 40.211 kb on - strand, within MPMX20_04687at 40.223 kb on - strand, within MPMX20_04687at 40.241 kb on + strand, within MPMX20_04687at 40.243 kb on - strand, within MPMX20_04687

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
remove
38,045 - MPMX20_04684 0.20 +0.8
38,048 - MPMX20_04684 0.20 +1.8
38,063 - MPMX20_04684 0.22 -0.2
38,085 - MPMX20_04684 0.25 -0.5
38,106 + MPMX20_04684 0.27 +1.2
38,162 + MPMX20_04684 0.33 +0.0
38,259 - MPMX20_04684 0.45 +2.8
38,274 - MPMX20_04684 0.46 +0.0
38,277 + MPMX20_04684 0.47 +1.2
38,279 - MPMX20_04684 0.47 -0.6
38,298 + MPMX20_04684 0.49 +2.3
38,306 - MPMX20_04684 0.50 -0.6
38,306 - MPMX20_04684 0.50 +1.0
38,320 + MPMX20_04684 0.52 -0.2
38,328 - MPMX20_04684 0.53 -1.4
38,328 - MPMX20_04684 0.53 -0.5
38,332 - MPMX20_04684 0.53 +0.4
38,397 + MPMX20_04684 0.61 +1.3
38,405 - MPMX20_04684 0.62 +0.5
38,405 - MPMX20_04684 0.62 -0.0
38,450 - MPMX20_04684 0.67 -0.1
38,455 + MPMX20_04684 0.67 +0.8
38,478 + MPMX20_04684 0.70 +0.8
38,498 + MPMX20_04684 0.72 +1.8
38,508 - MPMX20_04684 0.73 +0.3
38,527 + MPMX20_04684 0.76 -1.0
38,552 + MPMX20_04684 0.79 -1.3
38,552 + MPMX20_04684 0.79 +1.1
38,552 + MPMX20_04684 0.79 +0.3
38,560 - MPMX20_04684 0.80 +1.3
38,569 + MPMX20_04684 0.81 -0.6
38,605 + MPMX20_04684 0.85 -0.5
38,631 + MPMX20_04684 0.88 -0.7
38,631 + MPMX20_04684 0.88 -0.5
38,631 + MPMX20_04684 0.88 +0.7
38,631 + MPMX20_04684 0.88 +0.4
38,631 + MPMX20_04684 0.88 +0.8
38,631 + MPMX20_04684 0.88 +0.5
38,631 + MPMX20_04684 0.88 +1.3
38,639 - MPMX20_04684 0.89 -0.7
38,639 - MPMX20_04684 0.89 +1.2
38,639 - MPMX20_04684 0.89 -0.1
38,639 - MPMX20_04684 0.89 +1.1
38,639 - MPMX20_04684 0.89 +0.7
38,661 - -0.3
38,661 - +0.3
38,730 + -0.2
38,810 + -0.1
38,810 + -0.0
38,816 - -0.6
38,816 - -0.5
38,830 - -0.4
38,830 - -1.1
38,836 + +0.5
38,844 - -0.7
38,846 - +2.8
38,853 - -0.3
38,853 - +2.1
38,867 - -0.0
38,964 - -1.8
38,967 + +1.8
39,057 + -0.2
39,070 + MPMX20_04685 0.13 -1.4
39,070 + MPMX20_04685 0.13 -0.9
39,070 + MPMX20_04685 0.13 -1.2
39,070 + MPMX20_04685 0.13 +0.3
39,070 + MPMX20_04685 0.13 -0.5
39,070 + MPMX20_04685 0.13 -1.5
39,070 + MPMX20_04685 0.13 +0.7
39,070 + MPMX20_04685 0.13 -0.8
39,070 + MPMX20_04685 0.13 -1.0
39,078 - MPMX20_04685 0.16 -2.1
39,078 - MPMX20_04685 0.16 -0.7
39,078 - MPMX20_04685 0.16 -0.8
39,101 - MPMX20_04685 0.26 -3.6
39,119 + MPMX20_04685 0.33 +2.3
39,124 - MPMX20_04685 0.35 -1.1
39,205 + MPMX20_04685 0.69 -1.6
39,213 - MPMX20_04685 0.72 -0.2
39,213 - MPMX20_04685 0.72 -2.3
39,213 - MPMX20_04685 0.72 -2.2
39,219 + MPMX20_04685 0.74 -0.0
39,219 + MPMX20_04685 0.74 +0.0
39,219 + MPMX20_04685 0.74 +0.3
39,219 + MPMX20_04685 0.74 -1.7
39,227 - MPMX20_04685 0.78 -0.5
39,289 + -1.4
39,289 + +0.3
39,289 + +0.7
39,295 + -1.2
39,320 + +0.1
39,328 - -1.6
39,377 - -0.8
39,377 - +0.0
39,383 - -2.1
39,478 + MPMX20_04686 0.17 -1.1
39,478 + MPMX20_04686 0.17 +1.0
39,478 + MPMX20_04686 0.17 -0.3
39,478 + MPMX20_04686 0.17 +0.3
39,478 + MPMX20_04686 0.17 -0.4
39,478 + MPMX20_04686 0.17 -0.5
39,478 + MPMX20_04686 0.17 -0.2
39,478 + MPMX20_04686 0.17 +2.8
39,478 + MPMX20_04686 0.17 +1.3
39,478 + MPMX20_04686 0.17 +2.5
39,514 + MPMX20_04686 0.27 +0.4
39,546 + MPMX20_04686 0.35 +0.3
39,561 + MPMX20_04686 0.39 +1.5
39,622 - MPMX20_04686 0.55 -2.7
39,622 - MPMX20_04686 0.55 +1.8
39,630 + MPMX20_04686 0.57 -0.0
39,663 - MPMX20_04686 0.66 -2.0
39,687 + MPMX20_04686 0.72 -0.5
39,692 + MPMX20_04686 0.73 +0.8
39,695 - MPMX20_04686 0.74 -0.2
39,716 + MPMX20_04686 0.80 -0.2
39,719 - MPMX20_04686 0.81 -3.1
39,719 - MPMX20_04686 0.81 -2.3
39,723 + MPMX20_04686 0.82 +1.6
39,723 + MPMX20_04686 0.82 -0.5
39,724 - MPMX20_04686 0.82 +2.8
39,724 - MPMX20_04686 0.82 -2.9
39,724 - MPMX20_04686 0.82 -0.3
39,724 - MPMX20_04686 0.82 -1.7
39,731 - MPMX20_04686 0.84 -4.4
39,760 + +0.4
39,765 + +0.7
39,765 + +1.1
39,768 - -3.2
39,768 - -3.1
39,781 + -2.3
39,782 + +0.8
39,790 - -0.3
39,796 - -1.5
39,807 + +2.8
39,807 - -1.6
39,832 - -1.9
39,835 + +2.1
39,843 + -0.4
39,843 + +0.5
39,843 + +0.3
39,843 + +0.0
39,845 + +1.9
39,851 - +1.8
39,851 - -1.4
39,851 - +1.3
39,892 - -0.3
39,892 - -0.4
39,905 - -1.2
39,912 + +2.9
39,912 + +2.7
39,912 + +0.6
39,912 + +0.5
39,912 + -0.4
39,912 + +1.0
39,912 + +0.4
39,917 + -1.0
39,920 - -1.6
39,920 - -2.4
39,920 - -1.2
39,921 - -1.1
39,939 - +0.3
39,962 + +0.3
40,005 - -0.3
40,014 - -1.5
40,045 + +0.4
40,050 + -1.2
40,058 - +0.7
40,058 - -4.5
40,058 - -2.9
40,063 + +0.5
40,063 + +0.2
40,072 + +1.5
40,089 + -0.4
40,094 + -1.2
40,102 + -0.3
40,102 - -3.7
40,131 - -0.3
40,131 - -1.2
40,136 - +0.0
40,146 - -2.2
40,152 + +1.6
40,152 + -0.1
40,168 + MPMX20_04687 0.13 -0.9
40,168 + MPMX20_04687 0.13 -0.6
40,197 - MPMX20_04687 0.21 -1.7
40,211 - MPMX20_04687 0.25 -0.2
40,223 - MPMX20_04687 0.29 -4.4
40,241 + MPMX20_04687 0.34 -0.6
40,243 - MPMX20_04687 0.35 -2.4

Or see this region's nucleotide sequence