Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04166

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04164 and MPMX20_04165 are separated by 110 nucleotidesMPMX20_04165 and MPMX20_04166 overlap by 11 nucleotidesMPMX20_04166 and MPMX20_04167 are separated by 11 nucleotides MPMX20_04164: MPMX20_04164 - Biotin carboxylase, at 4,366,604 to 4,367,953 _04164 MPMX20_04165: MPMX20_04165 - putative membrane protein YhdT, at 4,368,064 to 4,368,306 _04165 MPMX20_04166: MPMX20_04166 - Sodium/pantothenate symporter, at 4,368,296 to 4,369,747 _04166 MPMX20_04167: MPMX20_04167 - Ribosomal protein L11 methyltransferase, at 4,369,759 to 4,370,640 _04167 Position (kb) 4368 4369 4370Strain fitness (log2 ratio) -2 -1 0 1 2at 4368.029 kb on - strandat 4368.079 kb on + strandat 4368.079 kb on + strandat 4368.087 kb on - strandat 4368.119 kb on - strand, within MPMX20_04165at 4368.238 kb on + strand, within MPMX20_04165at 4368.243 kb on + strand, within MPMX20_04165at 4368.243 kb on + strand, within MPMX20_04165at 4368.243 kb on + strand, within MPMX20_04165at 4368.251 kb on - strand, within MPMX20_04165at 4368.331 kb on + strandat 4368.375 kb on - strandat 4368.429 kb on + strandat 4368.464 kb on - strand, within MPMX20_04166at 4368.490 kb on + strand, within MPMX20_04166at 4368.520 kb on - strand, within MPMX20_04166at 4368.537 kb on + strand, within MPMX20_04166at 4368.568 kb on + strand, within MPMX20_04166at 4368.615 kb on + strand, within MPMX20_04166at 4368.615 kb on + strand, within MPMX20_04166at 4368.635 kb on - strand, within MPMX20_04166at 4368.686 kb on - strand, within MPMX20_04166at 4368.737 kb on + strand, within MPMX20_04166at 4368.742 kb on + strand, within MPMX20_04166at 4368.786 kb on + strand, within MPMX20_04166at 4368.798 kb on + strand, within MPMX20_04166at 4368.806 kb on - strand, within MPMX20_04166at 4368.808 kb on + strand, within MPMX20_04166at 4368.920 kb on + strand, within MPMX20_04166at 4368.920 kb on + strand, within MPMX20_04166at 4368.920 kb on + strand, within MPMX20_04166at 4368.920 kb on + strand, within MPMX20_04166at 4368.920 kb on + strand, within MPMX20_04166at 4368.928 kb on - strand, within MPMX20_04166at 4368.928 kb on - strand, within MPMX20_04166at 4368.979 kb on + strand, within MPMX20_04166at 4368.986 kb on + strand, within MPMX20_04166at 4369.005 kb on + strand, within MPMX20_04166at 4369.018 kb on + strand, within MPMX20_04166at 4369.035 kb on + strand, within MPMX20_04166at 4369.043 kb on - strand, within MPMX20_04166at 4369.043 kb on - strand, within MPMX20_04166at 4369.043 kb on - strand, within MPMX20_04166at 4369.054 kb on + strand, within MPMX20_04166at 4369.088 kb on - strand, within MPMX20_04166at 4369.090 kb on + strand, within MPMX20_04166at 4369.098 kb on - strand, within MPMX20_04166at 4369.141 kb on + strand, within MPMX20_04166at 4369.159 kb on + strand, within MPMX20_04166at 4369.194 kb on + strand, within MPMX20_04166at 4369.194 kb on + strand, within MPMX20_04166at 4369.225 kb on - strand, within MPMX20_04166at 4369.259 kb on + strand, within MPMX20_04166at 4369.350 kb on + strand, within MPMX20_04166at 4369.357 kb on + strand, within MPMX20_04166at 4369.372 kb on + strand, within MPMX20_04166at 4369.441 kb on - strand, within MPMX20_04166at 4369.476 kb on + strand, within MPMX20_04166at 4369.550 kb on - strand, within MPMX20_04166at 4369.552 kb on + strand, within MPMX20_04166at 4369.559 kb on - strand, within MPMX20_04166at 4369.576 kb on - strand, within MPMX20_04166at 4369.590 kb on + strand, within MPMX20_04166at 4369.597 kb on + strand, within MPMX20_04166at 4369.605 kb on - strandat 4369.639 kb on + strandat 4369.688 kb on + strandat 4369.780 kb on - strandat 4369.809 kb on + strandat 4369.817 kb on - strandat 4369.817 kb on - strandat 4369.822 kb on - strandat 4369.840 kb on + strandat 4369.919 kb on - strand, within MPMX20_04167at 4369.989 kb on + strand, within MPMX20_04167at 4370.219 kb on + strand, within MPMX20_04167at 4370.338 kb on + strand, within MPMX20_04167at 4370.346 kb on - strand, within MPMX20_04167at 4370.346 kb on - strand, within MPMX20_04167at 4370.360 kb on - strand, within MPMX20_04167at 4370.392 kb on - strand, within MPMX20_04167at 4370.412 kb on + strand, within MPMX20_04167at 4370.412 kb on + strand, within MPMX20_04167at 4370.492 kb on - strand, within MPMX20_04167at 4370.586 kb on + strandat 4370.655 kb on + strandat 4370.655 kb on + strandat 4370.663 kb on - strandat 4370.667 kb on + strandat 4370.673 kb on - strandat 4370.675 kb on - strandat 4370.681 kb on + strandat 4370.744 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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4,368,029 - +1.0
4,368,079 + -2.0
4,368,079 + -1.9
4,368,087 - -2.2
4,368,119 - MPMX20_04165 0.23 -1.4
4,368,238 + MPMX20_04165 0.72 -0.8
4,368,243 + MPMX20_04165 0.74 -0.9
4,368,243 + MPMX20_04165 0.74 +0.6
4,368,243 + MPMX20_04165 0.74 -0.8
4,368,251 - MPMX20_04165 0.77 -1.0
4,368,331 + +1.6
4,368,375 - -2.0
4,368,429 + -0.2
4,368,464 - MPMX20_04166 0.12 -1.2
4,368,490 + MPMX20_04166 0.13 -1.8
4,368,520 - MPMX20_04166 0.15 +0.6
4,368,537 + MPMX20_04166 0.17 +0.0
4,368,568 + MPMX20_04166 0.19 -0.1
4,368,615 + MPMX20_04166 0.22 -1.6
4,368,615 + MPMX20_04166 0.22 +0.5
4,368,635 - MPMX20_04166 0.23 -0.8
4,368,686 - MPMX20_04166 0.27 -0.7
4,368,737 + MPMX20_04166 0.30 +0.1
4,368,742 + MPMX20_04166 0.31 -1.3
4,368,786 + MPMX20_04166 0.34 -1.4
4,368,798 + MPMX20_04166 0.35 -2.3
4,368,806 - MPMX20_04166 0.35 -0.9
4,368,808 + MPMX20_04166 0.35 +0.0
4,368,920 + MPMX20_04166 0.43 -0.7
4,368,920 + MPMX20_04166 0.43 -1.7
4,368,920 + MPMX20_04166 0.43 -0.2
4,368,920 + MPMX20_04166 0.43 -0.2
4,368,920 + MPMX20_04166 0.43 -1.2
4,368,928 - MPMX20_04166 0.44 -0.9
4,368,928 - MPMX20_04166 0.44 +1.6
4,368,979 + MPMX20_04166 0.47 +0.6
4,368,986 + MPMX20_04166 0.48 -1.2
4,369,005 + MPMX20_04166 0.49 -0.9
4,369,018 + MPMX20_04166 0.50 -1.2
4,369,035 + MPMX20_04166 0.51 -0.4
4,369,043 - MPMX20_04166 0.51 -0.6
4,369,043 - MPMX20_04166 0.51 -0.6
4,369,043 - MPMX20_04166 0.51 +0.3
4,369,054 + MPMX20_04166 0.52 -1.4
4,369,088 - MPMX20_04166 0.55 +0.4
4,369,090 + MPMX20_04166 0.55 +0.8
4,369,098 - MPMX20_04166 0.55 -0.1
4,369,141 + MPMX20_04166 0.58 -1.4
4,369,159 + MPMX20_04166 0.59 +0.4
4,369,194 + MPMX20_04166 0.62 +0.3
4,369,194 + MPMX20_04166 0.62 -1.2
4,369,225 - MPMX20_04166 0.64 +0.3
4,369,259 + MPMX20_04166 0.66 +1.0
4,369,350 + MPMX20_04166 0.73 +0.2
4,369,357 + MPMX20_04166 0.73 +0.1
4,369,372 + MPMX20_04166 0.74 -1.6
4,369,441 - MPMX20_04166 0.79 -1.0
4,369,476 + MPMX20_04166 0.81 -1.2
4,369,550 - MPMX20_04166 0.86 +0.6
4,369,552 + MPMX20_04166 0.87 -0.4
4,369,559 - MPMX20_04166 0.87 -0.9
4,369,576 - MPMX20_04166 0.88 +0.0
4,369,590 + MPMX20_04166 0.89 -0.0
4,369,597 + MPMX20_04166 0.90 -0.9
4,369,605 - +2.6
4,369,639 + +0.0
4,369,688 + +0.8
4,369,780 - -2.2
4,369,809 + +0.6
4,369,817 - -0.9
4,369,817 - -1.3
4,369,822 - -1.0
4,369,840 + +0.0
4,369,919 - MPMX20_04167 0.18 +1.6
4,369,989 + MPMX20_04167 0.26 -0.9
4,370,219 + MPMX20_04167 0.52 +1.6
4,370,338 + MPMX20_04167 0.66 -1.3
4,370,346 - MPMX20_04167 0.67 +0.1
4,370,346 - MPMX20_04167 0.67 +2.0
4,370,360 - MPMX20_04167 0.68 +0.3
4,370,392 - MPMX20_04167 0.72 +0.0
4,370,412 + MPMX20_04167 0.74 -1.1
4,370,412 + MPMX20_04167 0.74 +0.3
4,370,492 - MPMX20_04167 0.83 -1.4
4,370,586 + -1.0
4,370,655 + -0.4
4,370,655 + +1.0
4,370,663 - -0.7
4,370,667 + -0.5
4,370,673 - +1.9
4,370,675 - +0.3
4,370,681 + -0.8
4,370,744 + +0.3

Or see this region's nucleotide sequence