Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04101

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04099 and MPMX20_04100 are separated by 4 nucleotidesMPMX20_04100 and MPMX20_04101 are separated by 7 nucleotidesMPMX20_04101 and MPMX20_04102 are separated by 231 nucleotides MPMX20_04099: MPMX20_04099 - Intermembrane phospholipid transport system binding protein MlaD, at 4,294,027 to 4,294,575 _04099 MPMX20_04100: MPMX20_04100 - Intermembrane phospholipid transport system permease protein MlaE, at 4,294,580 to 4,295,362 _04100 MPMX20_04101: MPMX20_04101 - Intermembrane phospholipid transport system ATP-binding protein MlaF, at 4,295,370 to 4,296,182 _04101 MPMX20_04102: MPMX20_04102 - Inner membrane protein YrbG, at 4,296,414 to 4,297,391 _04102 Position (kb) 4295 4296 4297Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4294.378 kb on + strand, within MPMX20_04099at 4294.391 kb on + strand, within MPMX20_04099at 4294.502 kb on - strand, within MPMX20_04099at 4294.631 kb on - strandat 4294.631 kb on - strandat 4294.648 kb on - strandat 4294.667 kb on + strand, within MPMX20_04100at 4294.726 kb on + strand, within MPMX20_04100at 4294.754 kb on - strand, within MPMX20_04100at 4294.766 kb on - strand, within MPMX20_04100at 4294.766 kb on - strand, within MPMX20_04100at 4294.793 kb on + strand, within MPMX20_04100at 4294.801 kb on - strand, within MPMX20_04100at 4294.816 kb on - strand, within MPMX20_04100at 4294.827 kb on + strand, within MPMX20_04100at 4294.997 kb on - strand, within MPMX20_04100at 4295.037 kb on + strand, within MPMX20_04100at 4295.045 kb on - strand, within MPMX20_04100at 4295.150 kb on + strand, within MPMX20_04100at 4295.219 kb on - strand, within MPMX20_04100at 4295.274 kb on + strand, within MPMX20_04100at 4295.282 kb on - strand, within MPMX20_04100at 4295.316 kb on - strandat 4295.332 kb on + strandat 4295.332 kb on + strandat 4295.332 kb on + strandat 4295.338 kb on - strandat 4295.376 kb on - strandat 4295.376 kb on - strandat 4295.426 kb on + strandat 4295.426 kb on + strandat 4295.434 kb on - strandat 4295.434 kb on - strandat 4295.434 kb on - strandat 4295.457 kb on + strand, within MPMX20_04101at 4295.527 kb on + strand, within MPMX20_04101at 4295.615 kb on + strand, within MPMX20_04101at 4295.615 kb on + strand, within MPMX20_04101at 4295.623 kb on - strand, within MPMX20_04101at 4295.626 kb on + strand, within MPMX20_04101at 4295.626 kb on + strand, within MPMX20_04101at 4295.626 kb on + strand, within MPMX20_04101at 4295.634 kb on - strand, within MPMX20_04101at 4295.654 kb on + strand, within MPMX20_04101at 4295.655 kb on + strand, within MPMX20_04101at 4295.750 kb on + strand, within MPMX20_04101at 4295.758 kb on - strand, within MPMX20_04101at 4295.799 kb on - strand, within MPMX20_04101at 4295.892 kb on + strand, within MPMX20_04101at 4295.919 kb on + strand, within MPMX20_04101at 4295.936 kb on + strand, within MPMX20_04101at 4295.936 kb on + strand, within MPMX20_04101at 4295.938 kb on + strand, within MPMX20_04101at 4295.940 kb on + strand, within MPMX20_04101at 4295.944 kb on - strand, within MPMX20_04101at 4295.946 kb on - strand, within MPMX20_04101at 4296.070 kb on + strand, within MPMX20_04101at 4296.188 kb on + strandat 4296.222 kb on + strandat 4296.232 kb on + strandat 4296.232 kb on + strandat 4296.240 kb on - strandat 4296.337 kb on + strandat 4296.337 kb on + strandat 4296.337 kb on + strandat 4296.338 kb on + strandat 4296.345 kb on - strandat 4296.345 kb on - strandat 4296.347 kb on + strandat 4296.349 kb on + strandat 4296.349 kb on + strandat 4296.352 kb on - strandat 4296.352 kb on - strandat 4296.371 kb on - strandat 4296.458 kb on + strandat 4296.458 kb on + strandat 4296.461 kb on + strandat 4296.461 kb on + strandat 4296.469 kb on - strandat 4296.469 kb on - strandat 4296.469 kb on - strandat 4296.469 kb on - strandat 4296.490 kb on + strandat 4296.490 kb on + strandat 4296.498 kb on - strandat 4296.503 kb on - strandat 4296.519 kb on - strand, within MPMX20_04102at 4296.540 kb on + strand, within MPMX20_04102at 4296.543 kb on - strand, within MPMX20_04102at 4296.614 kb on - strand, within MPMX20_04102at 4296.636 kb on + strand, within MPMX20_04102at 4296.656 kb on - strand, within MPMX20_04102at 4296.664 kb on + strand, within MPMX20_04102at 4296.671 kb on - strand, within MPMX20_04102at 4296.672 kb on - strand, within MPMX20_04102at 4296.686 kb on - strand, within MPMX20_04102at 4296.750 kb on - strand, within MPMX20_04102at 4296.757 kb on - strand, within MPMX20_04102at 4296.793 kb on - strand, within MPMX20_04102at 4296.881 kb on - strand, within MPMX20_04102at 4296.881 kb on - strand, within MPMX20_04102at 4297.008 kb on - strand, within MPMX20_04102at 4297.050 kb on - strand, within MPMX20_04102at 4297.088 kb on + strand, within MPMX20_04102at 4297.144 kb on - strand, within MPMX20_04102

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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4,294,378 + MPMX20_04099 0.64 -1.5
4,294,391 + MPMX20_04099 0.66 -2.5
4,294,502 - MPMX20_04099 0.87 -1.2
4,294,631 - -0.5
4,294,631 - -1.4
4,294,648 - +2.3
4,294,667 + MPMX20_04100 0.11 +0.3
4,294,726 + MPMX20_04100 0.19 -1.5
4,294,754 - MPMX20_04100 0.22 -2.5
4,294,766 - MPMX20_04100 0.24 -0.2
4,294,766 - MPMX20_04100 0.24 -0.7
4,294,793 + MPMX20_04100 0.27 -0.4
4,294,801 - MPMX20_04100 0.28 -1.5
4,294,816 - MPMX20_04100 0.30 +2.6
4,294,827 + MPMX20_04100 0.32 -0.4
4,294,997 - MPMX20_04100 0.53 -0.8
4,295,037 + MPMX20_04100 0.58 +0.8
4,295,045 - MPMX20_04100 0.59 +2.5
4,295,150 + MPMX20_04100 0.73 -0.7
4,295,219 - MPMX20_04100 0.82 -2.1
4,295,274 + MPMX20_04100 0.89 -0.5
4,295,282 - MPMX20_04100 0.90 -1.1
4,295,316 - +0.6
4,295,332 + -1.5
4,295,332 + -0.3
4,295,332 + +0.6
4,295,338 - -0.2
4,295,376 - +0.6
4,295,376 - +1.6
4,295,426 + +0.3
4,295,426 + -2.8
4,295,434 - -2.5
4,295,434 - -0.6
4,295,434 - +1.0
4,295,457 + MPMX20_04101 0.11 -0.5
4,295,527 + MPMX20_04101 0.19 -0.4
4,295,615 + MPMX20_04101 0.30 -0.2
4,295,615 + MPMX20_04101 0.30 -0.8
4,295,623 - MPMX20_04101 0.31 -2.8
4,295,626 + MPMX20_04101 0.31 +0.0
4,295,626 + MPMX20_04101 0.31 -1.7
4,295,626 + MPMX20_04101 0.31 +0.2
4,295,634 - MPMX20_04101 0.32 +0.1
4,295,654 + MPMX20_04101 0.35 -2.8
4,295,655 + MPMX20_04101 0.35 -0.4
4,295,750 + MPMX20_04101 0.47 -1.2
4,295,758 - MPMX20_04101 0.48 -1.6
4,295,799 - MPMX20_04101 0.53 -0.4
4,295,892 + MPMX20_04101 0.64 -0.6
4,295,919 + MPMX20_04101 0.68 -1.1
4,295,936 + MPMX20_04101 0.70 -1.9
4,295,936 + MPMX20_04101 0.70 -1.2
4,295,938 + MPMX20_04101 0.70 -2.3
4,295,940 + MPMX20_04101 0.70 -1.2
4,295,944 - MPMX20_04101 0.71 -2.3
4,295,946 - MPMX20_04101 0.71 +0.9
4,296,070 + MPMX20_04101 0.86 -0.5
4,296,188 + +1.6
4,296,222 + +0.1
4,296,232 + -0.9
4,296,232 + +1.4
4,296,240 - -2.4
4,296,337 + -0.2
4,296,337 + -0.6
4,296,337 + -0.9
4,296,338 + +0.6
4,296,345 - +1.6
4,296,345 - +0.8
4,296,347 + -0.9
4,296,349 + -1.8
4,296,349 + +1.0
4,296,352 - -0.2
4,296,352 - +0.0
4,296,371 - +0.1
4,296,458 + -0.7
4,296,458 + -0.5
4,296,461 + -0.3
4,296,461 + +0.2
4,296,469 - -0.5
4,296,469 - -0.1
4,296,469 - +4.3
4,296,469 - -0.4
4,296,490 + +1.0
4,296,490 + +2.6
4,296,498 - +1.6
4,296,503 - +1.8
4,296,519 - MPMX20_04102 0.11 -0.4
4,296,540 + MPMX20_04102 0.13 -0.3
4,296,543 - MPMX20_04102 0.13 -0.6
4,296,614 - MPMX20_04102 0.20 -1.2
4,296,636 + MPMX20_04102 0.23 -2.1
4,296,656 - MPMX20_04102 0.25 +2.6
4,296,664 + MPMX20_04102 0.26 +1.3
4,296,671 - MPMX20_04102 0.26 +0.3
4,296,672 - MPMX20_04102 0.26 -0.5
4,296,686 - MPMX20_04102 0.28 -1.7
4,296,750 - MPMX20_04102 0.34 +0.3
4,296,757 - MPMX20_04102 0.35 +0.6
4,296,793 - MPMX20_04102 0.39 +1.6
4,296,881 - MPMX20_04102 0.48 +0.7
4,296,881 - MPMX20_04102 0.48 +0.0
4,297,008 - MPMX20_04102 0.61 +0.6
4,297,050 - MPMX20_04102 0.65 -1.2
4,297,088 + MPMX20_04102 0.69 -1.0
4,297,144 - MPMX20_04102 0.75 -1.6

Or see this region's nucleotide sequence