Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04095 and MPMX20_04096 are separated by 50 nucleotides MPMX20_04096 and MPMX20_04097 are separated by 126 nucleotides MPMX20_04097 and MPMX20_04098 overlap by 1 nucleotides
MPMX20_04095: MPMX20_04095 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 4,291,389 to 4,292,648
_04095
MPMX20_04096: MPMX20_04096 - Acid stress protein IbaG, at 4,292,699 to 4,292,953
_04096
MPMX20_04097: MPMX20_04097 - Intermembrane phospholipid transport system binding protein MlaB, at 4,293,080 to 4,293,373
_04097
MPMX20_04098: MPMX20_04098 - Intermembrane phospholipid transport system binding protein MlaC, at 4,293,373 to 4,294,008
_04098
Position (kb) 4292
4293 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4292.740 kb on - strand, within MPMX20_04096 at 4292.740 kb on - strand, within MPMX20_04096 at 4292.740 kb on - strand, within MPMX20_04096 at 4292.740 kb on - strand, within MPMX20_04096 at 4292.742 kb on - strand, within MPMX20_04096 at 4292.770 kb on - strand, within MPMX20_04096 at 4292.809 kb on - strand, within MPMX20_04096 at 4292.839 kb on - strand, within MPMX20_04096 at 4292.839 kb on - strand, within MPMX20_04096 at 4292.839 kb on - strand, within MPMX20_04096 at 4292.873 kb on - strand, within MPMX20_04096 at 4292.873 kb on - strand, within MPMX20_04096 at 4292.899 kb on - strand, within MPMX20_04096 at 4292.929 kb on - strand at 4293.116 kb on - strand, within MPMX20_04097 at 4293.126 kb on - strand, within MPMX20_04097 at 4293.126 kb on - strand, within MPMX20_04097 at 4293.149 kb on + strand, within MPMX20_04097 at 4293.154 kb on + strand, within MPMX20_04097 at 4293.154 kb on + strand, within MPMX20_04097 at 4293.162 kb on - strand, within MPMX20_04097 at 4293.168 kb on - strand, within MPMX20_04097 at 4293.180 kb on - strand, within MPMX20_04097 at 4293.186 kb on + strand, within MPMX20_04097 at 4293.312 kb on - strand, within MPMX20_04097 at 4293.346 kb on + strand at 4293.364 kb on - strand at 4293.458 kb on + strand, within MPMX20_04098 at 4293.477 kb on + strand, within MPMX20_04098 at 4293.477 kb on + strand, within MPMX20_04098 at 4293.477 kb on + strand, within MPMX20_04098 at 4293.485 kb on - strand, within MPMX20_04098 at 4293.562 kb on + strand, within MPMX20_04098 at 4293.584 kb on - strand, within MPMX20_04098 at 4293.610 kb on + strand, within MPMX20_04098 at 4293.668 kb on + strand, within MPMX20_04098 at 4293.668 kb on + strand, within MPMX20_04098 at 4293.676 kb on - strand, within MPMX20_04098 at 4293.744 kb on + strand, within MPMX20_04098 at 4293.780 kb on - strand, within MPMX20_04098 at 4293.817 kb on - strand, within MPMX20_04098 at 4293.819 kb on + strand, within MPMX20_04098 at 4293.916 kb on - strand, within MPMX20_04098 at 4293.923 kb on + strand, within MPMX20_04098 at 4293.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 remove 4,292,740 - MPMX20_04096 0.16 -0.4 4,292,740 - MPMX20_04096 0.16 +0.1 4,292,740 - MPMX20_04096 0.16 -1.1 4,292,740 - MPMX20_04096 0.16 +0.7 4,292,742 - MPMX20_04096 0.17 +0.5 4,292,770 - MPMX20_04096 0.28 +0.8 4,292,809 - MPMX20_04096 0.43 -0.9 4,292,839 - MPMX20_04096 0.55 +0.1 4,292,839 - MPMX20_04096 0.55 +0.1 4,292,839 - MPMX20_04096 0.55 -0.5 4,292,873 - MPMX20_04096 0.68 -0.8 4,292,873 - MPMX20_04096 0.68 +0.8 4,292,899 - MPMX20_04096 0.78 -1.8 4,292,929 - -0.6 4,293,116 - MPMX20_04097 0.12 -1.6 4,293,126 - MPMX20_04097 0.16 -2.1 4,293,126 - MPMX20_04097 0.16 -1.6 4,293,149 + MPMX20_04097 0.23 -1.6 4,293,154 + MPMX20_04097 0.25 -0.3 4,293,154 + MPMX20_04097 0.25 +0.3 4,293,162 - MPMX20_04097 0.28 -1.7 4,293,168 - MPMX20_04097 0.30 +1.1 4,293,180 - MPMX20_04097 0.34 -0.2 4,293,186 + MPMX20_04097 0.36 -2.1 4,293,312 - MPMX20_04097 0.79 +0.1 4,293,346 + +1.1 4,293,364 - +0.1 4,293,458 + MPMX20_04098 0.13 -1.6 4,293,477 + MPMX20_04098 0.16 -1.6 4,293,477 + MPMX20_04098 0.16 -1.2 4,293,477 + MPMX20_04098 0.16 -2.0 4,293,485 - MPMX20_04098 0.18 -0.2 4,293,562 + MPMX20_04098 0.30 -0.8 4,293,584 - MPMX20_04098 0.33 -0.9 4,293,610 + MPMX20_04098 0.37 +1.6 4,293,668 + MPMX20_04098 0.46 -1.3 4,293,668 + MPMX20_04098 0.46 -1.2 4,293,676 - MPMX20_04098 0.48 -1.8 4,293,744 + MPMX20_04098 0.58 -1.1 4,293,780 - MPMX20_04098 0.64 -0.5 4,293,817 - MPMX20_04098 0.70 -0.4 4,293,819 + MPMX20_04098 0.70 +0.5 4,293,916 - MPMX20_04098 0.85 -1.1 4,293,923 + MPMX20_04098 0.86 -0.5 4,293,947 - +2.0
Or see this region's nucleotide sequence