Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03708

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03706 and MPMX20_03707 overlap by 6 nucleotidesMPMX20_03707 and MPMX20_03708 are separated by 100 nucleotidesMPMX20_03708 and MPMX20_03709 are separated by 41 nucleotides MPMX20_03706: MPMX20_03706 - Octopine catabolism/uptake operon regulatory protein OccR, at 3,907,885 to 3,908,808 _03706 MPMX20_03707: MPMX20_03707 - L-aspartate/glutamate-specific racemase, at 3,908,803 to 3,909,495 _03707 MPMX20_03708: MPMX20_03708 - hypothetical protein, at 3,909,596 to 3,909,955 _03708 MPMX20_03709: MPMX20_03709 - Ferric enterobactin transport protein FepE, at 3,909,997 to 3,911,151 _03709 Position (kb) 3909 3910Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9at 3908.626 kb on + strand, within MPMX20_03706at 3908.631 kb on + strand, within MPMX20_03706at 3908.631 kb on + strand, within MPMX20_03706at 3908.631 kb on + strand, within MPMX20_03706at 3908.639 kb on - strand, within MPMX20_03706at 3908.672 kb on + strand, within MPMX20_03706at 3908.695 kb on - strand, within MPMX20_03706at 3908.730 kb on + strandat 3908.748 kb on + strandat 3908.751 kb on + strandat 3908.751 kb on + strandat 3908.801 kb on + strandat 3908.801 kb on + strandat 3908.809 kb on - strandat 3908.809 kb on - strandat 3908.820 kb on - strandat 3908.862 kb on + strandat 3908.916 kb on - strand, within MPMX20_03707at 3908.961 kb on + strand, within MPMX20_03707at 3909.044 kb on - strand, within MPMX20_03707at 3909.044 kb on - strand, within MPMX20_03707at 3909.087 kb on - strand, within MPMX20_03707at 3909.087 kb on - strand, within MPMX20_03707at 3909.113 kb on + strand, within MPMX20_03707at 3909.120 kb on - strand, within MPMX20_03707at 3909.242 kb on + strand, within MPMX20_03707at 3909.288 kb on - strand, within MPMX20_03707at 3909.304 kb on - strand, within MPMX20_03707at 3909.317 kb on + strand, within MPMX20_03707at 3909.325 kb on - strand, within MPMX20_03707at 3909.363 kb on + strand, within MPMX20_03707at 3909.363 kb on + strand, within MPMX20_03707at 3909.371 kb on - strand, within MPMX20_03707at 3909.373 kb on + strand, within MPMX20_03707at 3909.373 kb on + strand, within MPMX20_03707at 3909.378 kb on + strand, within MPMX20_03707at 3909.381 kb on - strand, within MPMX20_03707at 3909.385 kb on - strand, within MPMX20_03707at 3909.403 kb on + strand, within MPMX20_03707at 3909.414 kb on + strand, within MPMX20_03707at 3909.414 kb on + strand, within MPMX20_03707at 3909.414 kb on + strand, within MPMX20_03707at 3909.414 kb on + strand, within MPMX20_03707at 3909.422 kb on - strand, within MPMX20_03707at 3909.422 kb on - strand, within MPMX20_03707at 3909.470 kb on + strandat 3909.470 kb on + strandat 3909.503 kb on + strandat 3909.503 kb on + strandat 3909.651 kb on + strand, within MPMX20_03708at 3909.687 kb on + strand, within MPMX20_03708at 3909.695 kb on - strand, within MPMX20_03708at 3909.732 kb on + strand, within MPMX20_03708at 3909.732 kb on + strand, within MPMX20_03708at 3909.740 kb on - strand, within MPMX20_03708at 3909.740 kb on - strand, within MPMX20_03708at 3909.740 kb on - strand, within MPMX20_03708at 3909.750 kb on - strand, within MPMX20_03708at 3909.750 kb on - strand, within MPMX20_03708at 3909.750 kb on - strand, within MPMX20_03708at 3909.758 kb on + strand, within MPMX20_03708at 3909.760 kb on - strand, within MPMX20_03708at 3909.766 kb on - strand, within MPMX20_03708at 3909.771 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on + strand, within MPMX20_03708at 3909.779 kb on - strand, within MPMX20_03708at 3909.779 kb on - strand, within MPMX20_03708at 3909.786 kb on + strand, within MPMX20_03708at 3909.786 kb on + strand, within MPMX20_03708at 3909.787 kb on - strand, within MPMX20_03708at 3909.787 kb on - strand, within MPMX20_03708at 3909.787 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.794 kb on - strand, within MPMX20_03708at 3909.849 kb on + strand, within MPMX20_03708at 3909.849 kb on + strand, within MPMX20_03708at 3909.857 kb on - strand, within MPMX20_03708at 3909.857 kb on - strand, within MPMX20_03708at 3909.872 kb on + strand, within MPMX20_03708at 3909.886 kb on - strand, within MPMX20_03708at 3909.902 kb on - strand, within MPMX20_03708at 3909.911 kb on + strand, within MPMX20_03708at 3909.921 kb on + strandat 3909.921 kb on + strandat 3909.921 kb on + strandat 3909.921 kb on - strandat 3909.921 kb on - strandat 3909.929 kb on - strandat 3909.929 kb on - strandat 3909.929 kb on - strandat 3909.929 kb on - strandat 3909.929 kb on - strandat 3909.929 kb on - strandat 3909.929 kb on - strandat 3909.965 kb on + strandat 3909.973 kb on - strandat 3909.976 kb on - strandat 3909.980 kb on + strandat 3909.988 kb on - strandat 3909.988 kb on - strandat 3910.015 kb on + strandat 3910.018 kb on - strandat 3910.031 kb on - strandat 3910.034 kb on + strandat 3910.050 kb on + strandat 3910.050 kb on + strandat 3910.058 kb on - strandat 3910.058 kb on - strandat 3910.086 kb on - strandat 3910.145 kb on + strand, within MPMX20_03709at 3910.167 kb on + strand, within MPMX20_03709at 3910.167 kb on + strand, within MPMX20_03709at 3910.240 kb on + strand, within MPMX20_03709at 3910.250 kb on + strand, within MPMX20_03709at 3910.330 kb on + strand, within MPMX20_03709at 3910.384 kb on + strand, within MPMX20_03709at 3910.389 kb on + strand, within MPMX20_03709at 3910.401 kb on + strand, within MPMX20_03709at 3910.440 kb on + strand, within MPMX20_03709at 3910.448 kb on - strand, within MPMX20_03709at 3910.648 kb on + strand, within MPMX20_03709at 3910.649 kb on + strand, within MPMX20_03709at 3910.659 kb on - strand, within MPMX20_03709at 3910.691 kb on + strand, within MPMX20_03709at 3910.716 kb on + strand, within MPMX20_03709at 3910.724 kb on + strand, within MPMX20_03709at 3910.724 kb on + strand, within MPMX20_03709at 3910.732 kb on - strand, within MPMX20_03709at 3910.732 kb on - strand, within MPMX20_03709at 3910.732 kb on - strand, within MPMX20_03709at 3910.732 kb on - strand, within MPMX20_03709at 3910.741 kb on + strand, within MPMX20_03709at 3910.741 kb on + strand, within MPMX20_03709at 3910.749 kb on - strand, within MPMX20_03709at 3910.762 kb on - strand, within MPMX20_03709at 3910.772 kb on + strand, within MPMX20_03709at 3910.780 kb on - strand, within MPMX20_03709at 3910.792 kb on - strand, within MPMX20_03709at 3910.814 kb on - strand, within MPMX20_03709at 3910.823 kb on - strand, within MPMX20_03709at 3910.823 kb on - strand, within MPMX20_03709at 3910.844 kb on - strand, within MPMX20_03709at 3910.851 kb on + strand, within MPMX20_03709at 3910.851 kb on + strand, within MPMX20_03709at 3910.851 kb on + strand, within MPMX20_03709at 3910.851 kb on + strand, within MPMX20_03709at 3910.851 kb on + strand, within MPMX20_03709at 3910.857 kb on - strand, within MPMX20_03709at 3910.862 kb on + strand, within MPMX20_03709at 3910.880 kb on + strand, within MPMX20_03709at 3910.890 kb on - strand, within MPMX20_03709at 3910.907 kb on + strand, within MPMX20_03709

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,908,626 + MPMX20_03706 0.80 +1.2
3,908,631 + MPMX20_03706 0.81 -0.5
3,908,631 + MPMX20_03706 0.81 -0.1
3,908,631 + MPMX20_03706 0.81 -1.3
3,908,639 - MPMX20_03706 0.82 -0.4
3,908,672 + MPMX20_03706 0.85 -0.1
3,908,695 - MPMX20_03706 0.88 +0.9
3,908,730 + -0.5
3,908,748 + -0.9
3,908,751 + -1.4
3,908,751 + -1.4
3,908,801 + -0.2
3,908,801 + -1.6
3,908,809 - +0.7
3,908,809 - +0.2
3,908,820 - +0.3
3,908,862 + +0.2
3,908,916 - MPMX20_03707 0.16 -0.4
3,908,961 + MPMX20_03707 0.23 -0.7
3,909,044 - MPMX20_03707 0.35 -0.4
3,909,044 - MPMX20_03707 0.35 -0.1
3,909,087 - MPMX20_03707 0.41 +2.2
3,909,087 - MPMX20_03707 0.41 -0.5
3,909,113 + MPMX20_03707 0.45 +1.2
3,909,120 - MPMX20_03707 0.46 +0.4
3,909,242 + MPMX20_03707 0.63 -1.6
3,909,288 - MPMX20_03707 0.70 +0.7
3,909,304 - MPMX20_03707 0.72 +1.2
3,909,317 + MPMX20_03707 0.74 +1.4
3,909,325 - MPMX20_03707 0.75 +0.8
3,909,363 + MPMX20_03707 0.81 +0.4
3,909,363 + MPMX20_03707 0.81 -0.1
3,909,371 - MPMX20_03707 0.82 +0.8
3,909,373 + MPMX20_03707 0.82 -2.4
3,909,373 + MPMX20_03707 0.82 +2.2
3,909,378 + MPMX20_03707 0.83 -2.3
3,909,381 - MPMX20_03707 0.83 +0.2
3,909,385 - MPMX20_03707 0.84 -1.1
3,909,403 + MPMX20_03707 0.87 -1.0
3,909,414 + MPMX20_03707 0.88 +0.9
3,909,414 + MPMX20_03707 0.88 +0.2
3,909,414 + MPMX20_03707 0.88 -0.1
3,909,414 + MPMX20_03707 0.88 +0.4
3,909,422 - MPMX20_03707 0.89 +0.3
3,909,422 - MPMX20_03707 0.89 +0.2
3,909,470 + +0.2
3,909,470 + +0.2
3,909,503 + -0.6
3,909,503 + +0.2
3,909,651 + MPMX20_03708 0.15 -0.4
3,909,687 + MPMX20_03708 0.25 -1.2
3,909,695 - MPMX20_03708 0.28 +0.9
3,909,732 + MPMX20_03708 0.38 -0.8
3,909,732 + MPMX20_03708 0.38 -0.7
3,909,740 - MPMX20_03708 0.40 -2.4
3,909,740 - MPMX20_03708 0.40 -0.5
3,909,740 - MPMX20_03708 0.40 -0.4
3,909,750 - MPMX20_03708 0.43 +0.7
3,909,750 - MPMX20_03708 0.43 +0.9
3,909,750 - MPMX20_03708 0.43 -0.5
3,909,758 + MPMX20_03708 0.45 +1.2
3,909,760 - MPMX20_03708 0.46 -0.6
3,909,766 - MPMX20_03708 0.47 -0.4
3,909,771 + MPMX20_03708 0.49 -0.2
3,909,779 + MPMX20_03708 0.51 -1.5
3,909,779 + MPMX20_03708 0.51 -0.6
3,909,779 + MPMX20_03708 0.51 -0.6
3,909,779 + MPMX20_03708 0.51 -1.2
3,909,779 + MPMX20_03708 0.51 -1.3
3,909,779 + MPMX20_03708 0.51 +1.7
3,909,779 + MPMX20_03708 0.51 +0.8
3,909,779 + MPMX20_03708 0.51 -2.8
3,909,779 - MPMX20_03708 0.51 +0.1
3,909,779 - MPMX20_03708 0.51 -1.1
3,909,786 + MPMX20_03708 0.53 +0.4
3,909,786 + MPMX20_03708 0.53 -1.2
3,909,787 - MPMX20_03708 0.53 -0.3
3,909,787 - MPMX20_03708 0.53 +1.7
3,909,787 - MPMX20_03708 0.53 +1.2
3,909,794 - MPMX20_03708 0.55 +0.3
3,909,794 - MPMX20_03708 0.55 +0.2
3,909,794 - MPMX20_03708 0.55 -0.1
3,909,794 - MPMX20_03708 0.55 +0.7
3,909,794 - MPMX20_03708 0.55 -0.4
3,909,794 - MPMX20_03708 0.55 -1.3
3,909,794 - MPMX20_03708 0.55 -0.3
3,909,794 - MPMX20_03708 0.55 -1.7
3,909,794 - MPMX20_03708 0.55 -0.6
3,909,849 + MPMX20_03708 0.70 +9.4
3,909,849 + MPMX20_03708 0.70 -0.2
3,909,857 - MPMX20_03708 0.72 -2.0
3,909,857 - MPMX20_03708 0.72 +0.1
3,909,872 + MPMX20_03708 0.77 -0.3
3,909,886 - MPMX20_03708 0.81 +0.7
3,909,902 - MPMX20_03708 0.85 -0.3
3,909,911 + MPMX20_03708 0.88 -1.3
3,909,921 + +0.8
3,909,921 + -0.9
3,909,921 + +1.2
3,909,921 - -0.8
3,909,921 - +0.9
3,909,929 - -0.5
3,909,929 - +0.4
3,909,929 - -0.8
3,909,929 - -0.1
3,909,929 - -0.1
3,909,929 - -1.5
3,909,929 - -0.4
3,909,965 + +2.7
3,909,973 - -1.0
3,909,976 - +0.9
3,909,980 + +1.7
3,909,988 - -0.4
3,909,988 - -0.6
3,910,015 + +0.9
3,910,018 - -1.1
3,910,031 - -0.3
3,910,034 + +0.6
3,910,050 + -0.5
3,910,050 + -0.6
3,910,058 - -1.7
3,910,058 - -0.4
3,910,086 - +7.8
3,910,145 + MPMX20_03709 0.13 -0.8
3,910,167 + MPMX20_03709 0.15 +0.7
3,910,167 + MPMX20_03709 0.15 +0.6
3,910,240 + MPMX20_03709 0.21 -0.9
3,910,250 + MPMX20_03709 0.22 -1.3
3,910,330 + MPMX20_03709 0.29 -0.7
3,910,384 + MPMX20_03709 0.34 +0.4
3,910,389 + MPMX20_03709 0.34 -0.2
3,910,401 + MPMX20_03709 0.35 -0.7
3,910,440 + MPMX20_03709 0.38 +1.7
3,910,448 - MPMX20_03709 0.39 -1.4
3,910,648 + MPMX20_03709 0.56 -0.1
3,910,649 + MPMX20_03709 0.56 -0.5
3,910,659 - MPMX20_03709 0.57 -1.1
3,910,691 + MPMX20_03709 0.60 +0.5
3,910,716 + MPMX20_03709 0.62 +1.3
3,910,724 + MPMX20_03709 0.63 +0.5
3,910,724 + MPMX20_03709 0.63 -0.3
3,910,732 - MPMX20_03709 0.64 +1.3
3,910,732 - MPMX20_03709 0.64 +1.2
3,910,732 - MPMX20_03709 0.64 +2.7
3,910,732 - MPMX20_03709 0.64 -2.4
3,910,741 + MPMX20_03709 0.64 -1.6
3,910,741 + MPMX20_03709 0.64 -2.3
3,910,749 - MPMX20_03709 0.65 -0.8
3,910,762 - MPMX20_03709 0.66 -1.9
3,910,772 + MPMX20_03709 0.67 -0.3
3,910,780 - MPMX20_03709 0.68 +1.2
3,910,792 - MPMX20_03709 0.69 +2.2
3,910,814 - MPMX20_03709 0.71 -2.5
3,910,823 - MPMX20_03709 0.72 -2.4
3,910,823 - MPMX20_03709 0.72 +0.7
3,910,844 - MPMX20_03709 0.73 +1.2
3,910,851 + MPMX20_03709 0.74 -1.8
3,910,851 + MPMX20_03709 0.74 +2.7
3,910,851 + MPMX20_03709 0.74 -0.5
3,910,851 + MPMX20_03709 0.74 -0.3
3,910,851 + MPMX20_03709 0.74 -2.6
3,910,857 - MPMX20_03709 0.74 -0.3
3,910,862 + MPMX20_03709 0.75 -0.8
3,910,880 + MPMX20_03709 0.76 +2.3
3,910,890 - MPMX20_03709 0.77 +0.7
3,910,907 + MPMX20_03709 0.79 +0.0

Or see this region's nucleotide sequence