Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03698

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03697 and MPMX20_03698 overlap by 8 nucleotidesMPMX20_03698 and MPMX20_03699 are separated by 424 nucleotides MPMX20_03697: MPMX20_03697 - Lysophospholipid transporter LplT, at 3,896,348 to 3,897,541 _03697 MPMX20_03698: MPMX20_03698 - Bifunctional protein Aas, at 3,897,534 to 3,899,693 _03698 MPMX20_03699: MPMX20_03699 - HTH-type transcriptional regulator GalR, at 3,900,118 to 3,901,134 _03699 Position (kb) 3897 3898 3899 3900Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3896.580 kb on - strand, within MPMX20_03697at 3896.608 kb on + strand, within MPMX20_03697at 3896.664 kb on - strand, within MPMX20_03697at 3896.700 kb on + strand, within MPMX20_03697at 3896.839 kb on + strand, within MPMX20_03697at 3896.839 kb on + strand, within MPMX20_03697at 3896.861 kb on - strand, within MPMX20_03697at 3896.861 kb on - strand, within MPMX20_03697at 3896.895 kb on + strand, within MPMX20_03697at 3896.951 kb on - strand, within MPMX20_03697at 3896.960 kb on - strand, within MPMX20_03697at 3896.962 kb on + strand, within MPMX20_03697at 3897.017 kb on + strand, within MPMX20_03697at 3897.020 kb on + strand, within MPMX20_03697at 3897.023 kb on - strand, within MPMX20_03697at 3897.025 kb on + strand, within MPMX20_03697at 3897.025 kb on - strand, within MPMX20_03697at 3897.025 kb on - strand, within MPMX20_03697at 3897.136 kb on - strand, within MPMX20_03697at 3897.191 kb on + strand, within MPMX20_03697at 3897.195 kb on - strand, within MPMX20_03697at 3897.199 kb on - strand, within MPMX20_03697at 3897.218 kb on - strand, within MPMX20_03697at 3897.228 kb on - strand, within MPMX20_03697at 3897.264 kb on + strand, within MPMX20_03697at 3897.282 kb on - strand, within MPMX20_03697at 3897.301 kb on - strand, within MPMX20_03697at 3897.320 kb on + strand, within MPMX20_03697at 3897.385 kb on - strand, within MPMX20_03697at 3897.400 kb on - strand, within MPMX20_03697at 3897.402 kb on + strand, within MPMX20_03697at 3897.402 kb on + strand, within MPMX20_03697at 3897.410 kb on - strand, within MPMX20_03697at 3897.414 kb on + strand, within MPMX20_03697at 3897.414 kb on + strand, within MPMX20_03697at 3897.422 kb on - strandat 3897.432 kb on - strandat 3897.478 kb on - strandat 3897.524 kb on - strandat 3897.524 kb on - strandat 3897.600 kb on + strandat 3897.694 kb on + strandat 3897.712 kb on + strandat 3897.725 kb on - strandat 3897.761 kb on - strand, within MPMX20_03698at 3897.861 kb on + strand, within MPMX20_03698at 3897.861 kb on + strand, within MPMX20_03698at 3897.861 kb on + strand, within MPMX20_03698at 3897.869 kb on - strand, within MPMX20_03698at 3897.869 kb on - strand, within MPMX20_03698at 3897.870 kb on - strand, within MPMX20_03698at 3897.879 kb on + strand, within MPMX20_03698at 3897.887 kb on - strand, within MPMX20_03698at 3897.918 kb on - strand, within MPMX20_03698at 3898.150 kb on - strand, within MPMX20_03698at 3898.150 kb on - strand, within MPMX20_03698at 3898.159 kb on - strand, within MPMX20_03698at 3898.172 kb on - strand, within MPMX20_03698at 3898.174 kb on - strand, within MPMX20_03698at 3898.263 kb on - strand, within MPMX20_03698at 3898.309 kb on - strand, within MPMX20_03698at 3898.317 kb on - strand, within MPMX20_03698at 3898.335 kb on + strand, within MPMX20_03698at 3898.343 kb on - strand, within MPMX20_03698at 3898.381 kb on - strand, within MPMX20_03698at 3898.392 kb on - strand, within MPMX20_03698at 3898.421 kb on + strand, within MPMX20_03698at 3898.462 kb on + strand, within MPMX20_03698at 3898.470 kb on - strand, within MPMX20_03698at 3898.485 kb on + strand, within MPMX20_03698at 3898.498 kb on + strand, within MPMX20_03698at 3898.508 kb on + strand, within MPMX20_03698at 3898.513 kb on + strand, within MPMX20_03698at 3898.535 kb on - strand, within MPMX20_03698at 3898.617 kb on - strand, within MPMX20_03698at 3898.620 kb on + strand, within MPMX20_03698at 3898.623 kb on - strand, within MPMX20_03698at 3898.628 kb on - strand, within MPMX20_03698at 3898.669 kb on + strand, within MPMX20_03698at 3898.722 kb on - strand, within MPMX20_03698at 3898.817 kb on + strand, within MPMX20_03698at 3898.919 kb on - strand, within MPMX20_03698at 3899.008 kb on + strand, within MPMX20_03698at 3899.305 kb on + strand, within MPMX20_03698at 3899.403 kb on + strand, within MPMX20_03698at 3899.499 kb on - strandat 3899.519 kb on - strandat 3899.621 kb on + strandat 3899.677 kb on - strandat 3899.693 kb on + strandat 3899.730 kb on + strandat 3899.820 kb on - strandat 3899.820 kb on - strandat 3899.830 kb on - strandat 3899.859 kb on + strandat 3899.866 kb on + strandat 3899.883 kb on + strandat 3899.926 kb on + strandat 3899.965 kb on + strandat 3900.003 kb on + strandat 3900.003 kb on + strandat 3900.029 kb on + strandat 3900.191 kb on + strandat 3900.200 kb on - strandat 3900.288 kb on - strand, within MPMX20_03699at 3900.300 kb on - strand, within MPMX20_03699at 3900.305 kb on + strand, within MPMX20_03699at 3900.307 kb on - strand, within MPMX20_03699at 3900.364 kb on - strand, within MPMX20_03699at 3900.447 kb on + strand, within MPMX20_03699at 3900.464 kb on + strand, within MPMX20_03699at 3900.464 kb on + strand, within MPMX20_03699at 3900.528 kb on + strand, within MPMX20_03699at 3900.634 kb on + strand, within MPMX20_03699at 3900.655 kb on + strand, within MPMX20_03699at 3900.663 kb on - strand, within MPMX20_03699

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,896,580 - MPMX20_03697 0.19 -2.4
3,896,608 + MPMX20_03697 0.22 +1.5
3,896,664 - MPMX20_03697 0.26 +0.4
3,896,700 + MPMX20_03697 0.29 -0.2
3,896,839 + MPMX20_03697 0.41 -0.3
3,896,839 + MPMX20_03697 0.41 -0.6
3,896,861 - MPMX20_03697 0.43 -1.8
3,896,861 - MPMX20_03697 0.43 -2.1
3,896,895 + MPMX20_03697 0.46 +1.4
3,896,951 - MPMX20_03697 0.51 -1.4
3,896,960 - MPMX20_03697 0.51 -1.3
3,896,962 + MPMX20_03697 0.51 -1.1
3,897,017 + MPMX20_03697 0.56 +0.8
3,897,020 + MPMX20_03697 0.56 -0.6
3,897,023 - MPMX20_03697 0.57 -0.8
3,897,025 + MPMX20_03697 0.57 -1.5
3,897,025 - MPMX20_03697 0.57 -1.2
3,897,025 - MPMX20_03697 0.57 +0.4
3,897,136 - MPMX20_03697 0.66 +1.2
3,897,191 + MPMX20_03697 0.71 -1.9
3,897,195 - MPMX20_03697 0.71 -0.2
3,897,199 - MPMX20_03697 0.71 +0.4
3,897,218 - MPMX20_03697 0.73 +0.8
3,897,228 - MPMX20_03697 0.74 -0.6
3,897,264 + MPMX20_03697 0.77 -0.9
3,897,282 - MPMX20_03697 0.78 -0.4
3,897,301 - MPMX20_03697 0.80 -0.9
3,897,320 + MPMX20_03697 0.81 -2.2
3,897,385 - MPMX20_03697 0.87 +0.6
3,897,400 - MPMX20_03697 0.88 +0.3
3,897,402 + MPMX20_03697 0.88 -2.0
3,897,402 + MPMX20_03697 0.88 -0.1
3,897,410 - MPMX20_03697 0.89 -1.3
3,897,414 + MPMX20_03697 0.89 -0.1
3,897,414 + MPMX20_03697 0.89 +1.2
3,897,422 - -1.4
3,897,432 - -0.4
3,897,478 - -0.0
3,897,524 - -0.7
3,897,524 - -0.3
3,897,600 + -2.1
3,897,694 + +1.2
3,897,712 + -1.3
3,897,725 - -1.2
3,897,761 - MPMX20_03698 0.11 -1.0
3,897,861 + MPMX20_03698 0.15 -0.8
3,897,861 + MPMX20_03698 0.15 -2.4
3,897,861 + MPMX20_03698 0.15 -0.9
3,897,869 - MPMX20_03698 0.16 -1.2
3,897,869 - MPMX20_03698 0.16 +1.2
3,897,870 - MPMX20_03698 0.16 +3.6
3,897,879 + MPMX20_03698 0.16 +0.0
3,897,887 - MPMX20_03698 0.16 -0.8
3,897,918 - MPMX20_03698 0.18 -0.2
3,898,150 - MPMX20_03698 0.29 -1.3
3,898,150 - MPMX20_03698 0.29 -0.4
3,898,159 - MPMX20_03698 0.29 -2.5
3,898,172 - MPMX20_03698 0.30 +1.2
3,898,174 - MPMX20_03698 0.30 -1.6
3,898,263 - MPMX20_03698 0.34 -1.7
3,898,309 - MPMX20_03698 0.36 -0.5
3,898,317 - MPMX20_03698 0.36 -1.2
3,898,335 + MPMX20_03698 0.37 -0.5
3,898,343 - MPMX20_03698 0.37 -1.4
3,898,381 - MPMX20_03698 0.39 -0.9
3,898,392 - MPMX20_03698 0.40 +0.2
3,898,421 + MPMX20_03698 0.41 -0.1
3,898,462 + MPMX20_03698 0.43 +1.2
3,898,470 - MPMX20_03698 0.43 -2.5
3,898,485 + MPMX20_03698 0.44 +0.5
3,898,498 + MPMX20_03698 0.45 -1.2
3,898,508 + MPMX20_03698 0.45 -0.9
3,898,513 + MPMX20_03698 0.45 -1.8
3,898,535 - MPMX20_03698 0.46 -1.2
3,898,617 - MPMX20_03698 0.50 -0.9
3,898,620 + MPMX20_03698 0.50 +0.3
3,898,623 - MPMX20_03698 0.50 -0.5
3,898,628 - MPMX20_03698 0.51 -2.3
3,898,669 + MPMX20_03698 0.53 +0.4
3,898,722 - MPMX20_03698 0.55 -1.1
3,898,817 + MPMX20_03698 0.59 -0.8
3,898,919 - MPMX20_03698 0.64 -2.9
3,899,008 + MPMX20_03698 0.68 +1.8
3,899,305 + MPMX20_03698 0.82 +1.8
3,899,403 + MPMX20_03698 0.87 -1.3
3,899,499 - -1.1
3,899,519 - -2.5
3,899,621 + -1.5
3,899,677 - -0.1
3,899,693 + -2.0
3,899,730 + +0.0
3,899,820 - -1.8
3,899,820 - -2.0
3,899,830 - +0.8
3,899,859 + -0.4
3,899,866 + -1.3
3,899,883 + -1.1
3,899,926 + +0.6
3,899,965 + -0.0
3,900,003 + -1.3
3,900,003 + -1.5
3,900,029 + -0.1
3,900,191 + -0.9
3,900,200 - +2.7
3,900,288 - MPMX20_03699 0.17 -1.7
3,900,300 - MPMX20_03699 0.18 +0.2
3,900,305 + MPMX20_03699 0.18 -2.5
3,900,307 - MPMX20_03699 0.19 -0.8
3,900,364 - MPMX20_03699 0.24 +1.5
3,900,447 + MPMX20_03699 0.32 +0.0
3,900,464 + MPMX20_03699 0.34 +0.7
3,900,464 + MPMX20_03699 0.34 -0.3
3,900,528 + MPMX20_03699 0.40 -0.5
3,900,634 + MPMX20_03699 0.51 -0.5
3,900,655 + MPMX20_03699 0.53 +0.3
3,900,663 - MPMX20_03699 0.54 -1.4

Or see this region's nucleotide sequence