Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03697 and MPMX20_03698 overlap by 8 nucleotides MPMX20_03698 and MPMX20_03699 are separated by 424 nucleotides
MPMX20_03697: MPMX20_03697 - Lysophospholipid transporter LplT, at 3,896,348 to 3,897,541
_03697
MPMX20_03698: MPMX20_03698 - Bifunctional protein Aas, at 3,897,534 to 3,899,693
_03698
MPMX20_03699: MPMX20_03699 - HTH-type transcriptional regulator GalR, at 3,900,118 to 3,901,134
_03699
Position (kb)
3897
3898
3899
3900 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3896.580 kb on - strand, within MPMX20_03697 at 3896.608 kb on + strand, within MPMX20_03697 at 3896.664 kb on - strand, within MPMX20_03697 at 3896.700 kb on + strand, within MPMX20_03697 at 3896.839 kb on + strand, within MPMX20_03697 at 3896.839 kb on + strand, within MPMX20_03697 at 3896.861 kb on - strand, within MPMX20_03697 at 3896.861 kb on - strand, within MPMX20_03697 at 3896.895 kb on + strand, within MPMX20_03697 at 3896.951 kb on - strand, within MPMX20_03697 at 3896.960 kb on - strand, within MPMX20_03697 at 3896.962 kb on + strand, within MPMX20_03697 at 3897.017 kb on + strand, within MPMX20_03697 at 3897.020 kb on + strand, within MPMX20_03697 at 3897.023 kb on - strand, within MPMX20_03697 at 3897.025 kb on + strand, within MPMX20_03697 at 3897.025 kb on - strand, within MPMX20_03697 at 3897.025 kb on - strand, within MPMX20_03697 at 3897.136 kb on - strand, within MPMX20_03697 at 3897.191 kb on + strand, within MPMX20_03697 at 3897.195 kb on - strand, within MPMX20_03697 at 3897.199 kb on - strand, within MPMX20_03697 at 3897.218 kb on - strand, within MPMX20_03697 at 3897.228 kb on - strand, within MPMX20_03697 at 3897.264 kb on + strand, within MPMX20_03697 at 3897.282 kb on - strand, within MPMX20_03697 at 3897.301 kb on - strand, within MPMX20_03697 at 3897.320 kb on + strand, within MPMX20_03697 at 3897.385 kb on - strand, within MPMX20_03697 at 3897.400 kb on - strand, within MPMX20_03697 at 3897.402 kb on + strand, within MPMX20_03697 at 3897.402 kb on + strand, within MPMX20_03697 at 3897.410 kb on - strand, within MPMX20_03697 at 3897.414 kb on + strand, within MPMX20_03697 at 3897.414 kb on + strand, within MPMX20_03697 at 3897.422 kb on - strand at 3897.432 kb on - strand at 3897.478 kb on - strand at 3897.524 kb on - strand at 3897.524 kb on - strand at 3897.600 kb on + strand at 3897.694 kb on + strand at 3897.712 kb on + strand at 3897.725 kb on - strand at 3897.761 kb on - strand, within MPMX20_03698 at 3897.861 kb on + strand, within MPMX20_03698 at 3897.861 kb on + strand, within MPMX20_03698 at 3897.861 kb on + strand, within MPMX20_03698 at 3897.869 kb on - strand, within MPMX20_03698 at 3897.869 kb on - strand, within MPMX20_03698 at 3897.870 kb on - strand, within MPMX20_03698 at 3897.879 kb on + strand, within MPMX20_03698 at 3897.887 kb on - strand, within MPMX20_03698 at 3897.918 kb on - strand, within MPMX20_03698 at 3898.150 kb on - strand, within MPMX20_03698 at 3898.150 kb on - strand, within MPMX20_03698 at 3898.159 kb on - strand, within MPMX20_03698 at 3898.172 kb on - strand, within MPMX20_03698 at 3898.174 kb on - strand, within MPMX20_03698 at 3898.263 kb on - strand, within MPMX20_03698 at 3898.309 kb on - strand, within MPMX20_03698 at 3898.317 kb on - strand, within MPMX20_03698 at 3898.335 kb on + strand, within MPMX20_03698 at 3898.343 kb on - strand, within MPMX20_03698 at 3898.381 kb on - strand, within MPMX20_03698 at 3898.392 kb on - strand, within MPMX20_03698 at 3898.421 kb on + strand, within MPMX20_03698 at 3898.462 kb on + strand, within MPMX20_03698 at 3898.470 kb on - strand, within MPMX20_03698 at 3898.485 kb on + strand, within MPMX20_03698 at 3898.498 kb on + strand, within MPMX20_03698 at 3898.508 kb on + strand, within MPMX20_03698 at 3898.513 kb on + strand, within MPMX20_03698 at 3898.535 kb on - strand, within MPMX20_03698 at 3898.617 kb on - strand, within MPMX20_03698 at 3898.620 kb on + strand, within MPMX20_03698 at 3898.623 kb on - strand, within MPMX20_03698 at 3898.628 kb on - strand, within MPMX20_03698 at 3898.669 kb on + strand, within MPMX20_03698 at 3898.722 kb on - strand, within MPMX20_03698 at 3898.817 kb on + strand, within MPMX20_03698 at 3898.919 kb on - strand, within MPMX20_03698 at 3899.008 kb on + strand, within MPMX20_03698 at 3899.305 kb on + strand, within MPMX20_03698 at 3899.403 kb on + strand, within MPMX20_03698 at 3899.499 kb on - strand at 3899.519 kb on - strand at 3899.621 kb on + strand at 3899.677 kb on - strand at 3899.693 kb on + strand at 3899.730 kb on + strand at 3899.820 kb on - strand at 3899.820 kb on - strand at 3899.830 kb on - strand at 3899.859 kb on + strand at 3899.866 kb on + strand at 3899.883 kb on + strand at 3899.926 kb on + strand at 3899.965 kb on + strand at 3900.003 kb on + strand at 3900.003 kb on + strand at 3900.029 kb on + strand at 3900.191 kb on + strand at 3900.200 kb on - strand at 3900.288 kb on - strand, within MPMX20_03699 at 3900.300 kb on - strand, within MPMX20_03699 at 3900.305 kb on + strand, within MPMX20_03699 at 3900.307 kb on - strand, within MPMX20_03699 at 3900.364 kb on - strand, within MPMX20_03699 at 3900.447 kb on + strand, within MPMX20_03699 at 3900.464 kb on + strand, within MPMX20_03699 at 3900.464 kb on + strand, within MPMX20_03699 at 3900.528 kb on + strand, within MPMX20_03699 at 3900.634 kb on + strand, within MPMX20_03699 at 3900.655 kb on + strand, within MPMX20_03699 at 3900.663 kb on - strand, within MPMX20_03699
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 remove 3,896,580 - MPMX20_03697 0.19 -2.4 3,896,608 + MPMX20_03697 0.22 +1.5 3,896,664 - MPMX20_03697 0.26 +0.4 3,896,700 + MPMX20_03697 0.29 -0.2 3,896,839 + MPMX20_03697 0.41 -0.3 3,896,839 + MPMX20_03697 0.41 -0.6 3,896,861 - MPMX20_03697 0.43 -1.8 3,896,861 - MPMX20_03697 0.43 -2.1 3,896,895 + MPMX20_03697 0.46 +1.4 3,896,951 - MPMX20_03697 0.51 -1.4 3,896,960 - MPMX20_03697 0.51 -1.3 3,896,962 + MPMX20_03697 0.51 -1.1 3,897,017 + MPMX20_03697 0.56 +0.8 3,897,020 + MPMX20_03697 0.56 -0.6 3,897,023 - MPMX20_03697 0.57 -0.8 3,897,025 + MPMX20_03697 0.57 -1.5 3,897,025 - MPMX20_03697 0.57 -1.2 3,897,025 - MPMX20_03697 0.57 +0.4 3,897,136 - MPMX20_03697 0.66 +1.2 3,897,191 + MPMX20_03697 0.71 -1.9 3,897,195 - MPMX20_03697 0.71 -0.2 3,897,199 - MPMX20_03697 0.71 +0.4 3,897,218 - MPMX20_03697 0.73 +0.8 3,897,228 - MPMX20_03697 0.74 -0.6 3,897,264 + MPMX20_03697 0.77 -0.9 3,897,282 - MPMX20_03697 0.78 -0.4 3,897,301 - MPMX20_03697 0.80 -0.9 3,897,320 + MPMX20_03697 0.81 -2.2 3,897,385 - MPMX20_03697 0.87 +0.6 3,897,400 - MPMX20_03697 0.88 +0.3 3,897,402 + MPMX20_03697 0.88 -2.0 3,897,402 + MPMX20_03697 0.88 -0.1 3,897,410 - MPMX20_03697 0.89 -1.3 3,897,414 + MPMX20_03697 0.89 -0.1 3,897,414 + MPMX20_03697 0.89 +1.2 3,897,422 - -1.4 3,897,432 - -0.4 3,897,478 - -0.0 3,897,524 - -0.7 3,897,524 - -0.3 3,897,600 + -2.1 3,897,694 + +1.2 3,897,712 + -1.3 3,897,725 - -1.2 3,897,761 - MPMX20_03698 0.11 -1.0 3,897,861 + MPMX20_03698 0.15 -0.8 3,897,861 + MPMX20_03698 0.15 -2.4 3,897,861 + MPMX20_03698 0.15 -0.9 3,897,869 - MPMX20_03698 0.16 -1.2 3,897,869 - MPMX20_03698 0.16 +1.2 3,897,870 - MPMX20_03698 0.16 +3.6 3,897,879 + MPMX20_03698 0.16 +0.0 3,897,887 - MPMX20_03698 0.16 -0.8 3,897,918 - MPMX20_03698 0.18 -0.2 3,898,150 - MPMX20_03698 0.29 -1.3 3,898,150 - MPMX20_03698 0.29 -0.4 3,898,159 - MPMX20_03698 0.29 -2.5 3,898,172 - MPMX20_03698 0.30 +1.2 3,898,174 - MPMX20_03698 0.30 -1.6 3,898,263 - MPMX20_03698 0.34 -1.7 3,898,309 - MPMX20_03698 0.36 -0.5 3,898,317 - MPMX20_03698 0.36 -1.2 3,898,335 + MPMX20_03698 0.37 -0.5 3,898,343 - MPMX20_03698 0.37 -1.4 3,898,381 - MPMX20_03698 0.39 -0.9 3,898,392 - MPMX20_03698 0.40 +0.2 3,898,421 + MPMX20_03698 0.41 -0.1 3,898,462 + MPMX20_03698 0.43 +1.2 3,898,470 - MPMX20_03698 0.43 -2.5 3,898,485 + MPMX20_03698 0.44 +0.5 3,898,498 + MPMX20_03698 0.45 -1.2 3,898,508 + MPMX20_03698 0.45 -0.9 3,898,513 + MPMX20_03698 0.45 -1.8 3,898,535 - MPMX20_03698 0.46 -1.2 3,898,617 - MPMX20_03698 0.50 -0.9 3,898,620 + MPMX20_03698 0.50 +0.3 3,898,623 - MPMX20_03698 0.50 -0.5 3,898,628 - MPMX20_03698 0.51 -2.3 3,898,669 + MPMX20_03698 0.53 +0.4 3,898,722 - MPMX20_03698 0.55 -1.1 3,898,817 + MPMX20_03698 0.59 -0.8 3,898,919 - MPMX20_03698 0.64 -2.9 3,899,008 + MPMX20_03698 0.68 +1.8 3,899,305 + MPMX20_03698 0.82 +1.8 3,899,403 + MPMX20_03698 0.87 -1.3 3,899,499 - -1.1 3,899,519 - -2.5 3,899,621 + -1.5 3,899,677 - -0.1 3,899,693 + -2.0 3,899,730 + +0.0 3,899,820 - -1.8 3,899,820 - -2.0 3,899,830 - +0.8 3,899,859 + -0.4 3,899,866 + -1.3 3,899,883 + -1.1 3,899,926 + +0.6 3,899,965 + -0.0 3,900,003 + -1.3 3,900,003 + -1.5 3,900,029 + -0.1 3,900,191 + -0.9 3,900,200 - +2.7 3,900,288 - MPMX20_03699 0.17 -1.7 3,900,300 - MPMX20_03699 0.18 +0.2 3,900,305 + MPMX20_03699 0.18 -2.5 3,900,307 - MPMX20_03699 0.19 -0.8 3,900,364 - MPMX20_03699 0.24 +1.5 3,900,447 + MPMX20_03699 0.32 +0.0 3,900,464 + MPMX20_03699 0.34 +0.7 3,900,464 + MPMX20_03699 0.34 -0.3 3,900,528 + MPMX20_03699 0.40 -0.5 3,900,634 + MPMX20_03699 0.51 -0.5 3,900,655 + MPMX20_03699 0.53 +0.3 3,900,663 - MPMX20_03699 0.54 -1.4
Or see this region's nucleotide sequence