Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03623

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03621 and MPMX20_03622 overlap by 11 nucleotidesMPMX20_03622 and MPMX20_03623 are separated by 171 nucleotidesMPMX20_03623 and MPMX20_03624 overlap by 4 nucleotidesMPMX20_03624 and MPMX20_03625 are separated by 107 nucleotides MPMX20_03621: MPMX20_03621 - Phenolic acid decarboxylase, at 3,811,087 to 3,812,514 _03621 MPMX20_03622: MPMX20_03622 - putative UbiX-like flavin prenyltransferase, at 3,812,504 to 3,813,106 _03622 MPMX20_03623: MPMX20_03623 - Transcriptional regulator HosA, at 3,813,278 to 3,813,685 _03623 MPMX20_03624: MPMX20_03624 - HTH-type transcriptional regulator DmlR, at 3,813,682 to 3,814,569 _03624 MPMX20_03625: MPMX20_03625 - Putative multidrug resistance protein MdtD, at 3,814,677 to 3,815,885 _03625 Position (kb) 3813 3814Strain fitness (log2 ratio) -2 -1 0 1 2at 3812.280 kb on + strand, within MPMX20_03621at 3812.296 kb on - strand, within MPMX20_03621at 3812.328 kb on - strand, within MPMX20_03621at 3812.331 kb on + strand, within MPMX20_03621at 3812.341 kb on + strand, within MPMX20_03621at 3812.401 kb on + strandat 3812.480 kb on - strandat 3812.492 kb on - strandat 3812.502 kb on - strandat 3812.623 kb on - strand, within MPMX20_03622at 3812.648 kb on + strand, within MPMX20_03622at 3812.687 kb on + strand, within MPMX20_03622at 3812.732 kb on - strand, within MPMX20_03622at 3812.793 kb on + strand, within MPMX20_03622at 3812.803 kb on - strand, within MPMX20_03622at 3812.803 kb on - strand, within MPMX20_03622at 3812.818 kb on - strand, within MPMX20_03622at 3812.818 kb on - strand, within MPMX20_03622at 3812.943 kb on + strand, within MPMX20_03622at 3812.951 kb on - strand, within MPMX20_03622at 3812.951 kb on - strand, within MPMX20_03622at 3812.966 kb on - strand, within MPMX20_03622at 3812.966 kb on - strand, within MPMX20_03622at 3813.060 kb on - strandat 3813.306 kb on + strandat 3813.391 kb on - strand, within MPMX20_03623at 3813.420 kb on + strand, within MPMX20_03623at 3813.447 kb on + strand, within MPMX20_03623at 3813.455 kb on - strand, within MPMX20_03623at 3813.499 kb on + strand, within MPMX20_03623at 3813.507 kb on - strand, within MPMX20_03623at 3813.579 kb on + strand, within MPMX20_03623at 3813.587 kb on - strand, within MPMX20_03623at 3813.587 kb on - strand, within MPMX20_03623at 3813.587 kb on - strand, within MPMX20_03623at 3813.587 kb on - strand, within MPMX20_03623at 3813.608 kb on - strand, within MPMX20_03623at 3813.769 kb on - strandat 3813.781 kb on + strand, within MPMX20_03624at 3813.781 kb on + strand, within MPMX20_03624at 3813.782 kb on - strand, within MPMX20_03624at 3813.789 kb on - strand, within MPMX20_03624at 3813.860 kb on - strand, within MPMX20_03624at 3813.881 kb on + strand, within MPMX20_03624at 3813.899 kb on - strand, within MPMX20_03624at 3813.899 kb on - strand, within MPMX20_03624at 3814.007 kb on - strand, within MPMX20_03624at 3814.034 kb on - strand, within MPMX20_03624at 3814.209 kb on + strand, within MPMX20_03624at 3814.217 kb on - strand, within MPMX20_03624at 3814.218 kb on - strand, within MPMX20_03624at 3814.229 kb on + strand, within MPMX20_03624at 3814.420 kb on + strand, within MPMX20_03624at 3814.436 kb on - strand, within MPMX20_03624at 3814.442 kb on - strand, within MPMX20_03624at 3814.469 kb on - strand, within MPMX20_03624at 3814.488 kb on + strandat 3814.492 kb on + strandat 3814.543 kb on - strandat 3814.658 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,812,280 + MPMX20_03621 0.84 +0.4
3,812,296 - MPMX20_03621 0.85 -0.4
3,812,328 - MPMX20_03621 0.87 -0.0
3,812,331 + MPMX20_03621 0.87 +1.4
3,812,341 + MPMX20_03621 0.88 -0.3
3,812,401 + +0.0
3,812,480 - -0.6
3,812,492 - -1.3
3,812,502 - +0.1
3,812,623 - MPMX20_03622 0.20 -1.3
3,812,648 + MPMX20_03622 0.24 -1.8
3,812,687 + MPMX20_03622 0.30 +0.8
3,812,732 - MPMX20_03622 0.38 -1.5
3,812,793 + MPMX20_03622 0.48 -0.3
3,812,803 - MPMX20_03622 0.50 +2.7
3,812,803 - MPMX20_03622 0.50 -1.2
3,812,818 - MPMX20_03622 0.52 +0.4
3,812,818 - MPMX20_03622 0.52 +0.2
3,812,943 + MPMX20_03622 0.73 +2.0
3,812,951 - MPMX20_03622 0.74 +0.3
3,812,951 - MPMX20_03622 0.74 +0.6
3,812,966 - MPMX20_03622 0.77 -0.2
3,812,966 - MPMX20_03622 0.77 -2.1
3,813,060 - -0.8
3,813,306 + +0.1
3,813,391 - MPMX20_03623 0.28 +1.2
3,813,420 + MPMX20_03623 0.35 +0.6
3,813,447 + MPMX20_03623 0.41 -1.6
3,813,455 - MPMX20_03623 0.43 +0.3
3,813,499 + MPMX20_03623 0.54 -1.7
3,813,507 - MPMX20_03623 0.56 +0.1
3,813,579 + MPMX20_03623 0.74 +0.3
3,813,587 - MPMX20_03623 0.76 -0.2
3,813,587 - MPMX20_03623 0.76 -0.6
3,813,587 - MPMX20_03623 0.76 -0.7
3,813,587 - MPMX20_03623 0.76 -1.0
3,813,608 - MPMX20_03623 0.81 -0.9
3,813,769 - +0.0
3,813,781 + MPMX20_03624 0.11 -0.2
3,813,781 + MPMX20_03624 0.11 -0.8
3,813,782 - MPMX20_03624 0.11 +1.1
3,813,789 - MPMX20_03624 0.12 -0.3
3,813,860 - MPMX20_03624 0.20 -0.5
3,813,881 + MPMX20_03624 0.22 -0.3
3,813,899 - MPMX20_03624 0.24 -0.2
3,813,899 - MPMX20_03624 0.24 -0.5
3,814,007 - MPMX20_03624 0.37 +0.1
3,814,034 - MPMX20_03624 0.40 +0.5
3,814,209 + MPMX20_03624 0.59 -0.3
3,814,217 - MPMX20_03624 0.60 -0.6
3,814,218 - MPMX20_03624 0.60 +0.0
3,814,229 + MPMX20_03624 0.62 -0.4
3,814,420 + MPMX20_03624 0.83 +1.7
3,814,436 - MPMX20_03624 0.85 -0.9
3,814,442 - MPMX20_03624 0.86 -0.3
3,814,469 - MPMX20_03624 0.89 -1.2
3,814,488 + -2.1
3,814,492 + +0.7
3,814,543 - +0.6
3,814,658 - -0.6

Or see this region's nucleotide sequence