Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03593

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03591 and MPMX20_03592 overlap by 8 nucleotidesMPMX20_03592 and MPMX20_03593 overlap by 4 nucleotidesMPMX20_03593 and MPMX20_03594 are separated by 187 nucleotides MPMX20_03591: MPMX20_03591 - Glucitol operon repressor, at 3,779,166 to 3,779,939 _03591 MPMX20_03592: MPMX20_03592 - Arabinose 5-phosphate isomerase GutQ, at 3,779,932 to 3,780,897 _03592 MPMX20_03593: MPMX20_03593 - Anaerobic nitric oxide reductase transcription regulator NorR, at 3,780,894 to 3,782,408 _03593 MPMX20_03594: MPMX20_03594 - Anaerobic nitric oxide reductase flavorubredoxin, at 3,782,596 to 3,784,035 _03594 Position (kb) 3780 3781 3782 3783Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3779.956 kb on + strandat 3779.968 kb on - strandat 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.333 kb on - strand, within MPMX20_03592at 3780.399 kb on - strand, within MPMX20_03592at 3780.514 kb on - strand, within MPMX20_03592at 3780.545 kb on - strand, within MPMX20_03592at 3780.571 kb on + strand, within MPMX20_03592at 3780.572 kb on - strand, within MPMX20_03592at 3780.572 kb on - strand, within MPMX20_03592at 3780.601 kb on + strand, within MPMX20_03592at 3780.654 kb on + strand, within MPMX20_03592at 3780.662 kb on - strand, within MPMX20_03592at 3780.662 kb on - strand, within MPMX20_03592at 3780.674 kb on + strand, within MPMX20_03592at 3780.725 kb on - strand, within MPMX20_03592at 3780.784 kb on + strand, within MPMX20_03592at 3780.790 kb on - strand, within MPMX20_03592at 3780.793 kb on - strand, within MPMX20_03592at 3780.864 kb on + strandat 3780.940 kb on - strandat 3780.949 kb on - strandat 3780.968 kb on + strandat 3780.968 kb on + strandat 3780.978 kb on - strandat 3781.047 kb on + strand, within MPMX20_03593at 3781.047 kb on + strand, within MPMX20_03593at 3781.144 kb on + strand, within MPMX20_03593at 3781.163 kb on - strand, within MPMX20_03593at 3781.253 kb on - strand, within MPMX20_03593at 3781.374 kb on + strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.418 kb on + strand, within MPMX20_03593at 3781.418 kb on + strand, within MPMX20_03593at 3781.418 kb on + strand, within MPMX20_03593at 3781.423 kb on + strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.462 kb on - strand, within MPMX20_03593at 3781.492 kb on - strand, within MPMX20_03593at 3781.496 kb on + strand, within MPMX20_03593at 3781.512 kb on - strand, within MPMX20_03593at 3781.624 kb on + strand, within MPMX20_03593at 3781.632 kb on - strand, within MPMX20_03593at 3781.632 kb on - strand, within MPMX20_03593at 3781.660 kb on + strand, within MPMX20_03593at 3781.668 kb on - strand, within MPMX20_03593at 3781.683 kb on - strand, within MPMX20_03593at 3781.686 kb on - strand, within MPMX20_03593at 3781.692 kb on - strand, within MPMX20_03593at 3781.742 kb on + strand, within MPMX20_03593at 3781.742 kb on + strand, within MPMX20_03593at 3781.752 kb on + strand, within MPMX20_03593at 3781.868 kb on + strand, within MPMX20_03593at 3781.935 kb on + strand, within MPMX20_03593at 3781.938 kb on - strand, within MPMX20_03593at 3781.996 kb on + strand, within MPMX20_03593at 3782.081 kb on - strand, within MPMX20_03593at 3782.091 kb on + strand, within MPMX20_03593at 3782.099 kb on - strand, within MPMX20_03593at 3782.153 kb on + strand, within MPMX20_03593at 3782.156 kb on - strand, within MPMX20_03593at 3782.203 kb on + strand, within MPMX20_03593at 3782.228 kb on + strand, within MPMX20_03593at 3782.236 kb on - strand, within MPMX20_03593at 3782.267 kb on - strandat 3782.274 kb on + strandat 3782.277 kb on - strandat 3782.282 kb on - strandat 3782.301 kb on - strandat 3782.427 kb on - strandat 3782.427 kb on - strandat 3782.558 kb on - strandat 3782.605 kb on - strandat 3782.605 kb on - strandat 3782.650 kb on - strandat 3782.650 kb on - strandat 3782.650 kb on - strandat 3782.650 kb on - strandat 3782.650 kb on - strandat 3782.650 kb on - strandat 3782.657 kb on + strandat 3782.683 kb on - strandat 3782.822 kb on + strand, within MPMX20_03594at 3782.900 kb on - strand, within MPMX20_03594at 3782.938 kb on - strand, within MPMX20_03594at 3782.985 kb on + strand, within MPMX20_03594at 3782.994 kb on - strand, within MPMX20_03594at 3782.994 kb on - strand, within MPMX20_03594at 3783.014 kb on - strand, within MPMX20_03594at 3783.038 kb on + strand, within MPMX20_03594at 3783.046 kb on - strand, within MPMX20_03594at 3783.063 kb on - strand, within MPMX20_03594at 3783.068 kb on + strand, within MPMX20_03594at 3783.076 kb on - strand, within MPMX20_03594at 3783.081 kb on + strand, within MPMX20_03594at 3783.103 kb on - strand, within MPMX20_03594at 3783.105 kb on + strand, within MPMX20_03594at 3783.105 kb on + strand, within MPMX20_03594at 3783.126 kb on + strand, within MPMX20_03594at 3783.139 kb on - strand, within MPMX20_03594at 3783.149 kb on - strand, within MPMX20_03594at 3783.149 kb on - strand, within MPMX20_03594at 3783.154 kb on - strand, within MPMX20_03594at 3783.171 kb on - strand, within MPMX20_03594at 3783.196 kb on + strand, within MPMX20_03594at 3783.239 kb on + strand, within MPMX20_03594at 3783.239 kb on + strand, within MPMX20_03594at 3783.239 kb on + strand, within MPMX20_03594at 3783.239 kb on + strand, within MPMX20_03594at 3783.247 kb on - strand, within MPMX20_03594at 3783.247 kb on - strand, within MPMX20_03594at 3783.296 kb on + strand, within MPMX20_03594at 3783.407 kb on + strand, within MPMX20_03594

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,779,956 + +2.7
3,779,968 - -1.6
3,780,041 + MPMX20_03592 0.11 +0.2
3,780,041 + MPMX20_03592 0.11 -0.9
3,780,041 + MPMX20_03592 0.11 +1.7
3,780,041 + MPMX20_03592 0.11 -0.2
3,780,041 + MPMX20_03592 0.11 -2.1
3,780,049 - MPMX20_03592 0.12 +1.1
3,780,049 - MPMX20_03592 0.12 -1.4
3,780,333 - MPMX20_03592 0.42 +0.1
3,780,399 - MPMX20_03592 0.48 -1.5
3,780,514 - MPMX20_03592 0.60 -1.2
3,780,545 - MPMX20_03592 0.63 -1.2
3,780,571 + MPMX20_03592 0.66 +0.0
3,780,572 - MPMX20_03592 0.66 -2.0
3,780,572 - MPMX20_03592 0.66 -0.9
3,780,601 + MPMX20_03592 0.69 -0.9
3,780,654 + MPMX20_03592 0.75 -1.3
3,780,662 - MPMX20_03592 0.76 +1.7
3,780,662 - MPMX20_03592 0.76 -0.1
3,780,674 + MPMX20_03592 0.77 -1.5
3,780,725 - MPMX20_03592 0.82 -0.9
3,780,784 + MPMX20_03592 0.88 -0.1
3,780,790 - MPMX20_03592 0.89 -0.9
3,780,793 - MPMX20_03592 0.89 +1.7
3,780,864 + -0.3
3,780,940 - +0.4
3,780,949 - -0.3
3,780,968 + -1.1
3,780,968 + +1.6
3,780,978 - +1.1
3,781,047 + MPMX20_03593 0.10 -2.2
3,781,047 + MPMX20_03593 0.10 -0.4
3,781,144 + MPMX20_03593 0.17 -1.4
3,781,163 - MPMX20_03593 0.18 -1.2
3,781,253 - MPMX20_03593 0.24 -0.4
3,781,374 + MPMX20_03593 0.32 -2.2
3,781,382 - MPMX20_03593 0.32 -1.6
3,781,382 - MPMX20_03593 0.32 +0.7
3,781,382 - MPMX20_03593 0.32 -0.9
3,781,382 - MPMX20_03593 0.32 -1.7
3,781,418 + MPMX20_03593 0.35 +0.8
3,781,418 + MPMX20_03593 0.35 +1.7
3,781,418 + MPMX20_03593 0.35 -0.4
3,781,423 + MPMX20_03593 0.35 +0.4
3,781,426 - MPMX20_03593 0.35 -1.2
3,781,426 - MPMX20_03593 0.35 -0.6
3,781,426 - MPMX20_03593 0.35 +3.7
3,781,426 - MPMX20_03593 0.35 -0.1
3,781,426 - MPMX20_03593 0.35 -2.3
3,781,462 - MPMX20_03593 0.37 -0.1
3,781,492 - MPMX20_03593 0.39 -0.1
3,781,496 + MPMX20_03593 0.40 -0.4
3,781,512 - MPMX20_03593 0.41 +0.7
3,781,624 + MPMX20_03593 0.48 +0.1
3,781,632 - MPMX20_03593 0.49 -1.4
3,781,632 - MPMX20_03593 0.49 -0.6
3,781,660 + MPMX20_03593 0.51 +2.7
3,781,668 - MPMX20_03593 0.51 -0.6
3,781,683 - MPMX20_03593 0.52 -0.7
3,781,686 - MPMX20_03593 0.52 -0.1
3,781,692 - MPMX20_03593 0.53 -0.9
3,781,742 + MPMX20_03593 0.56 +0.0
3,781,742 + MPMX20_03593 0.56 -2.0
3,781,752 + MPMX20_03593 0.57 -0.1
3,781,868 + MPMX20_03593 0.64 +0.7
3,781,935 + MPMX20_03593 0.69 -0.1
3,781,938 - MPMX20_03593 0.69 -0.3
3,781,996 + MPMX20_03593 0.73 +0.4
3,782,081 - MPMX20_03593 0.78 -1.1
3,782,091 + MPMX20_03593 0.79 -0.3
3,782,099 - MPMX20_03593 0.80 -0.2
3,782,153 + MPMX20_03593 0.83 -0.8
3,782,156 - MPMX20_03593 0.83 -0.4
3,782,203 + MPMX20_03593 0.86 -1.9
3,782,228 + MPMX20_03593 0.88 -1.4
3,782,236 - MPMX20_03593 0.89 +0.2
3,782,267 - -1.0
3,782,274 + -0.9
3,782,277 - -1.0
3,782,282 - -0.7
3,782,301 - +0.4
3,782,427 - +0.5
3,782,427 - +0.1
3,782,558 - -1.1
3,782,605 - +1.7
3,782,605 - -0.8
3,782,650 - -0.7
3,782,650 - -0.1
3,782,650 - -0.0
3,782,650 - -1.8
3,782,650 - -1.2
3,782,650 - -0.1
3,782,657 + +1.2
3,782,683 - -0.3
3,782,822 + MPMX20_03594 0.16 -0.6
3,782,900 - MPMX20_03594 0.21 +2.7
3,782,938 - MPMX20_03594 0.24 +0.5
3,782,985 + MPMX20_03594 0.27 -1.5
3,782,994 - MPMX20_03594 0.28 +1.2
3,782,994 - MPMX20_03594 0.28 -0.3
3,783,014 - MPMX20_03594 0.29 -3.0
3,783,038 + MPMX20_03594 0.31 -0.1
3,783,046 - MPMX20_03594 0.31 -0.9
3,783,063 - MPMX20_03594 0.32 +0.2
3,783,068 + MPMX20_03594 0.33 +0.1
3,783,076 - MPMX20_03594 0.33 -0.9
3,783,081 + MPMX20_03594 0.34 +0.4
3,783,103 - MPMX20_03594 0.35 +0.2
3,783,105 + MPMX20_03594 0.35 +0.7
3,783,105 + MPMX20_03594 0.35 -1.6
3,783,126 + MPMX20_03594 0.37 +0.0
3,783,139 - MPMX20_03594 0.38 +1.2
3,783,149 - MPMX20_03594 0.38 -0.6
3,783,149 - MPMX20_03594 0.38 +1.2
3,783,154 - MPMX20_03594 0.39 -0.6
3,783,171 - MPMX20_03594 0.40 -1.1
3,783,196 + MPMX20_03594 0.42 +1.1
3,783,239 + MPMX20_03594 0.45 -1.7
3,783,239 + MPMX20_03594 0.45 -1.4
3,783,239 + MPMX20_03594 0.45 -0.1
3,783,239 + MPMX20_03594 0.45 +0.6
3,783,247 - MPMX20_03594 0.45 -0.6
3,783,247 - MPMX20_03594 0.45 -1.3
3,783,296 + MPMX20_03594 0.49 +0.2
3,783,407 + MPMX20_03594 0.56 -0.7

Or see this region's nucleotide sequence