Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03592

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03590 and MPMX20_03591 are separated by 63 nucleotidesMPMX20_03591 and MPMX20_03592 overlap by 8 nucleotidesMPMX20_03592 and MPMX20_03593 overlap by 4 nucleotides MPMX20_03590: MPMX20_03590 - hypothetical protein, at 3,778,743 to 3,779,102 _03590 MPMX20_03591: MPMX20_03591 - Glucitol operon repressor, at 3,779,166 to 3,779,939 _03591 MPMX20_03592: MPMX20_03592 - Arabinose 5-phosphate isomerase GutQ, at 3,779,932 to 3,780,897 _03592 MPMX20_03593: MPMX20_03593 - Anaerobic nitric oxide reductase transcription regulator NorR, at 3,780,894 to 3,782,408 _03593 Position (kb) 3779 3780 3781Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3778.968 kb on - strand, within MPMX20_03590at 3779.057 kb on - strand, within MPMX20_03590at 3779.067 kb on - strandat 3779.265 kb on - strand, within MPMX20_03591at 3779.329 kb on + strand, within MPMX20_03591at 3779.337 kb on - strand, within MPMX20_03591at 3779.381 kb on + strand, within MPMX20_03591at 3779.389 kb on - strand, within MPMX20_03591at 3779.389 kb on - strand, within MPMX20_03591at 3779.446 kb on + strand, within MPMX20_03591at 3779.470 kb on - strand, within MPMX20_03591at 3779.470 kb on - strand, within MPMX20_03591at 3779.558 kb on + strand, within MPMX20_03591at 3779.558 kb on - strand, within MPMX20_03591at 3779.670 kb on + strand, within MPMX20_03591at 3779.678 kb on - strand, within MPMX20_03591at 3779.687 kb on - strand, within MPMX20_03591at 3779.689 kb on + strand, within MPMX20_03591at 3779.735 kb on - strand, within MPMX20_03591at 3779.750 kb on + strand, within MPMX20_03591at 3779.758 kb on - strand, within MPMX20_03591at 3779.758 kb on - strand, within MPMX20_03591at 3779.820 kb on + strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.870 kb on - strandat 3779.968 kb on - strandat 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.333 kb on - strand, within MPMX20_03592at 3780.399 kb on - strand, within MPMX20_03592at 3780.514 kb on - strand, within MPMX20_03592at 3780.545 kb on - strand, within MPMX20_03592at 3780.571 kb on + strand, within MPMX20_03592at 3780.572 kb on - strand, within MPMX20_03592at 3780.572 kb on - strand, within MPMX20_03592at 3780.601 kb on + strand, within MPMX20_03592at 3780.654 kb on + strand, within MPMX20_03592at 3780.662 kb on - strand, within MPMX20_03592at 3780.662 kb on - strand, within MPMX20_03592at 3780.674 kb on + strand, within MPMX20_03592at 3780.725 kb on - strand, within MPMX20_03592at 3780.784 kb on + strand, within MPMX20_03592at 3780.790 kb on - strand, within MPMX20_03592at 3780.793 kb on - strand, within MPMX20_03592at 3780.864 kb on + strandat 3780.940 kb on - strandat 3780.949 kb on - strandat 3780.968 kb on + strandat 3780.968 kb on + strandat 3780.978 kb on - strandat 3781.047 kb on + strand, within MPMX20_03593at 3781.047 kb on + strand, within MPMX20_03593at 3781.144 kb on + strand, within MPMX20_03593at 3781.163 kb on - strand, within MPMX20_03593at 3781.253 kb on - strand, within MPMX20_03593at 3781.374 kb on + strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.382 kb on - strand, within MPMX20_03593at 3781.418 kb on + strand, within MPMX20_03593at 3781.418 kb on + strand, within MPMX20_03593at 3781.418 kb on + strand, within MPMX20_03593at 3781.423 kb on + strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.426 kb on - strand, within MPMX20_03593at 3781.462 kb on - strand, within MPMX20_03593at 3781.492 kb on - strand, within MPMX20_03593at 3781.496 kb on + strand, within MPMX20_03593at 3781.512 kb on - strand, within MPMX20_03593at 3781.624 kb on + strand, within MPMX20_03593at 3781.632 kb on - strand, within MPMX20_03593at 3781.632 kb on - strand, within MPMX20_03593at 3781.660 kb on + strand, within MPMX20_03593at 3781.668 kb on - strand, within MPMX20_03593at 3781.683 kb on - strand, within MPMX20_03593at 3781.686 kb on - strand, within MPMX20_03593at 3781.692 kb on - strand, within MPMX20_03593at 3781.742 kb on + strand, within MPMX20_03593at 3781.742 kb on + strand, within MPMX20_03593at 3781.752 kb on + strand, within MPMX20_03593at 3781.868 kb on + strand, within MPMX20_03593

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,778,968 - MPMX20_03590 0.62 -0.6
3,779,057 - MPMX20_03590 0.87 -1.4
3,779,067 - +0.1
3,779,265 - MPMX20_03591 0.13 +1.3
3,779,329 + MPMX20_03591 0.21 +0.1
3,779,337 - MPMX20_03591 0.22 +2.7
3,779,381 + MPMX20_03591 0.28 -0.2
3,779,389 - MPMX20_03591 0.29 +1.4
3,779,389 - MPMX20_03591 0.29 +0.6
3,779,446 + MPMX20_03591 0.36 +0.9
3,779,470 - MPMX20_03591 0.39 -0.1
3,779,470 - MPMX20_03591 0.39 +1.1
3,779,558 + MPMX20_03591 0.51 +2.2
3,779,558 - MPMX20_03591 0.51 +1.1
3,779,670 + MPMX20_03591 0.65 +0.7
3,779,678 - MPMX20_03591 0.66 -0.0
3,779,687 - MPMX20_03591 0.67 +3.7
3,779,689 + MPMX20_03591 0.68 +0.4
3,779,735 - MPMX20_03591 0.74 -0.7
3,779,750 + MPMX20_03591 0.75 +0.5
3,779,758 - MPMX20_03591 0.76 +1.8
3,779,758 - MPMX20_03591 0.76 +0.5
3,779,820 + MPMX20_03591 0.84 +0.2
3,779,854 - MPMX20_03591 0.89 -0.7
3,779,854 - MPMX20_03591 0.89 +0.4
3,779,854 - MPMX20_03591 0.89 -1.5
3,779,870 - -0.7
3,779,968 - -1.6
3,780,041 + MPMX20_03592 0.11 +0.2
3,780,041 + MPMX20_03592 0.11 -0.9
3,780,041 + MPMX20_03592 0.11 -0.2
3,780,041 + MPMX20_03592 0.11 -2.1
3,780,049 - MPMX20_03592 0.12 +1.1
3,780,049 - MPMX20_03592 0.12 -1.4
3,780,333 - MPMX20_03592 0.42 +0.1
3,780,399 - MPMX20_03592 0.48 -1.5
3,780,514 - MPMX20_03592 0.60 -1.2
3,780,545 - MPMX20_03592 0.63 -1.2
3,780,571 + MPMX20_03592 0.66 +0.0
3,780,572 - MPMX20_03592 0.66 -2.0
3,780,572 - MPMX20_03592 0.66 -0.9
3,780,601 + MPMX20_03592 0.69 -0.9
3,780,654 + MPMX20_03592 0.75 -1.3
3,780,662 - MPMX20_03592 0.76 +1.7
3,780,662 - MPMX20_03592 0.76 -0.1
3,780,674 + MPMX20_03592 0.77 -1.5
3,780,725 - MPMX20_03592 0.82 -0.9
3,780,784 + MPMX20_03592 0.88 -0.1
3,780,790 - MPMX20_03592 0.89 -0.9
3,780,793 - MPMX20_03592 0.89 +1.7
3,780,864 + -0.3
3,780,940 - +0.4
3,780,949 - -0.3
3,780,968 + -1.1
3,780,968 + +1.6
3,780,978 - +1.1
3,781,047 + MPMX20_03593 0.10 -2.2
3,781,047 + MPMX20_03593 0.10 -0.4
3,781,144 + MPMX20_03593 0.17 -1.4
3,781,163 - MPMX20_03593 0.18 -1.2
3,781,253 - MPMX20_03593 0.24 -0.4
3,781,374 + MPMX20_03593 0.32 -2.2
3,781,382 - MPMX20_03593 0.32 -1.6
3,781,382 - MPMX20_03593 0.32 +0.7
3,781,382 - MPMX20_03593 0.32 -0.9
3,781,382 - MPMX20_03593 0.32 -1.7
3,781,418 + MPMX20_03593 0.35 +0.8
3,781,418 + MPMX20_03593 0.35 +1.7
3,781,418 + MPMX20_03593 0.35 -0.4
3,781,423 + MPMX20_03593 0.35 +0.4
3,781,426 - MPMX20_03593 0.35 -1.2
3,781,426 - MPMX20_03593 0.35 -0.6
3,781,426 - MPMX20_03593 0.35 +3.7
3,781,426 - MPMX20_03593 0.35 -0.1
3,781,426 - MPMX20_03593 0.35 -2.3
3,781,462 - MPMX20_03593 0.37 -0.1
3,781,492 - MPMX20_03593 0.39 -0.1
3,781,496 + MPMX20_03593 0.40 -0.4
3,781,512 - MPMX20_03593 0.41 +0.7
3,781,624 + MPMX20_03593 0.48 +0.1
3,781,632 - MPMX20_03593 0.49 -1.4
3,781,632 - MPMX20_03593 0.49 -0.6
3,781,660 + MPMX20_03593 0.51 +2.7
3,781,668 - MPMX20_03593 0.51 -0.6
3,781,683 - MPMX20_03593 0.52 -0.7
3,781,686 - MPMX20_03593 0.52 -0.1
3,781,692 - MPMX20_03593 0.53 -0.9
3,781,742 + MPMX20_03593 0.56 +0.0
3,781,742 + MPMX20_03593 0.56 -2.0
3,781,752 + MPMX20_03593 0.57 -0.1
3,781,868 + MPMX20_03593 0.64 +0.7

Or see this region's nucleotide sequence