Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02634

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02632 and MPMX20_02633 are separated by 36 nucleotidesMPMX20_02633 and MPMX20_02634 are separated by 3 nucleotidesMPMX20_02634 and MPMX20_02635 overlap by 4 nucleotidesMPMX20_02635 and MPMX20_02636 overlap by 1 nucleotides MPMX20_02632: MPMX20_02632 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 2,776,390 to 2,777,244 _02632 MPMX20_02633: MPMX20_02633 - hypothetical protein, at 2,777,281 to 2,778,090 _02633 MPMX20_02634: MPMX20_02634 - Protein YchQ, at 2,778,094 to 2,778,486 _02634 MPMX20_02635: MPMX20_02635 - Release factor glutamine methyltransferase, at 2,778,483 to 2,779,313 _02635 MPMX20_02636: MPMX20_02636 - Peptide chain release factor RF1, at 2,779,313 to 2,780,395 _02636 Position (kb) 2778 2779Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2777.279 kb on + strandat 2777.287 kb on - strandat 2777.320 kb on - strandat 2777.320 kb on - strandat 2777.320 kb on - strandat 2777.396 kb on - strand, within MPMX20_02633at 2777.414 kb on + strand, within MPMX20_02633at 2777.464 kb on - strand, within MPMX20_02633at 2777.637 kb on - strand, within MPMX20_02633at 2777.654 kb on - strand, within MPMX20_02633at 2777.654 kb on - strand, within MPMX20_02633at 2777.776 kb on - strand, within MPMX20_02633at 2777.811 kb on - strand, within MPMX20_02633at 2777.848 kb on - strand, within MPMX20_02633at 2777.982 kb on - strand, within MPMX20_02633at 2778.093 kb on - strandat 2778.100 kb on - strandat 2778.111 kb on + strandat 2778.147 kb on + strand, within MPMX20_02634at 2778.264 kb on + strand, within MPMX20_02634at 2778.336 kb on - strand, within MPMX20_02634at 2778.339 kb on + strand, within MPMX20_02634at 2778.347 kb on - strand, within MPMX20_02634at 2778.347 kb on - strand, within MPMX20_02634at 2778.347 kb on - strand, within MPMX20_02634at 2778.438 kb on + strand, within MPMX20_02634at 2778.446 kb on + strand, within MPMX20_02634at 2778.446 kb on + strand, within MPMX20_02634at 2778.459 kb on - strandat 2778.803 kb on + strand, within MPMX20_02635at 2778.833 kb on + strand, within MPMX20_02635at 2778.841 kb on - strand, within MPMX20_02635at 2778.856 kb on + strand, within MPMX20_02635at 2778.930 kb on + strand, within MPMX20_02635at 2779.073 kb on - strand, within MPMX20_02635at 2779.086 kb on - strand, within MPMX20_02635at 2779.289 kb on + strandat 2779.297 kb on - strandat 2779.297 kb on - strandat 2779.297 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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2,777,279 + -0.5
2,777,287 - +0.4
2,777,320 - -0.9
2,777,320 - -1.0
2,777,320 - -2.0
2,777,396 - MPMX20_02633 0.14 -1.5
2,777,414 + MPMX20_02633 0.16 -1.6
2,777,464 - MPMX20_02633 0.23 -1.4
2,777,637 - MPMX20_02633 0.44 -1.5
2,777,654 - MPMX20_02633 0.46 -0.9
2,777,654 - MPMX20_02633 0.46 +0.3
2,777,776 - MPMX20_02633 0.61 +0.1
2,777,811 - MPMX20_02633 0.65 -2.1
2,777,848 - MPMX20_02633 0.70 -2.1
2,777,982 - MPMX20_02633 0.87 -1.1
2,778,093 - -1.0
2,778,100 - -4.8
2,778,111 + -0.2
2,778,147 + MPMX20_02634 0.13 -0.9
2,778,264 + MPMX20_02634 0.43 -0.2
2,778,336 - MPMX20_02634 0.62 -0.0
2,778,339 + MPMX20_02634 0.62 -0.1
2,778,347 - MPMX20_02634 0.64 -0.1
2,778,347 - MPMX20_02634 0.64 -1.2
2,778,347 - MPMX20_02634 0.64 -1.8
2,778,438 + MPMX20_02634 0.88 -0.9
2,778,446 + MPMX20_02634 0.90 +0.3
2,778,446 + MPMX20_02634 0.90 +0.8
2,778,459 - +0.9
2,778,803 + MPMX20_02635 0.39 +0.6
2,778,833 + MPMX20_02635 0.42 -1.5
2,778,841 - MPMX20_02635 0.43 -1.1
2,778,856 + MPMX20_02635 0.45 +0.6
2,778,930 + MPMX20_02635 0.54 +1.9
2,779,073 - MPMX20_02635 0.71 +1.3
2,779,086 - MPMX20_02635 0.73 +0.3
2,779,289 + +1.9
2,779,297 - +1.9
2,779,297 - -0.8
2,779,297 - -0.1

Or see this region's nucleotide sequence