Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01648

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01647 and MPMX20_01648 are separated by 4 nucleotidesMPMX20_01648 and MPMX20_01649 are separated by 466 nucleotides MPMX20_01647: MPMX20_01647 - hypothetical protein, at 1,744,957 to 1,747,419 _01647 MPMX20_01648: MPMX20_01648 - hypothetical protein, at 1,747,424 to 1,748,404 _01648 MPMX20_01649: MPMX20_01649 - hypothetical protein, at 1,748,871 to 1,749,086 _01649 Position (kb) 1747 1748 1749Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 1746.468 kb on + strand, within MPMX20_01647at 1746.468 kb on + strand, within MPMX20_01647at 1746.474 kb on - strand, within MPMX20_01647at 1746.535 kb on + strand, within MPMX20_01647at 1746.576 kb on - strand, within MPMX20_01647at 1746.591 kb on + strand, within MPMX20_01647at 1746.611 kb on - strand, within MPMX20_01647at 1746.615 kb on + strand, within MPMX20_01647at 1746.618 kb on - strand, within MPMX20_01647at 1746.647 kb on + strand, within MPMX20_01647at 1746.655 kb on - strand, within MPMX20_01647at 1746.655 kb on - strand, within MPMX20_01647at 1746.717 kb on - strand, within MPMX20_01647at 1746.739 kb on - strand, within MPMX20_01647at 1746.751 kb on - strand, within MPMX20_01647at 1746.788 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.793 kb on + strand, within MPMX20_01647at 1746.796 kb on - strand, within MPMX20_01647at 1746.796 kb on - strand, within MPMX20_01647at 1746.796 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.801 kb on - strand, within MPMX20_01647at 1746.849 kb on + strand, within MPMX20_01647at 1746.864 kb on - strand, within MPMX20_01647at 1746.931 kb on + strand, within MPMX20_01647at 1746.937 kb on - strand, within MPMX20_01647at 1746.937 kb on - strand, within MPMX20_01647at 1746.939 kb on - strand, within MPMX20_01647at 1746.939 kb on - strand, within MPMX20_01647at 1746.939 kb on - strand, within MPMX20_01647at 1747.013 kb on + strand, within MPMX20_01647at 1747.018 kb on + strand, within MPMX20_01647at 1747.032 kb on - strand, within MPMX20_01647at 1747.038 kb on - strand, within MPMX20_01647at 1747.042 kb on - strand, within MPMX20_01647at 1747.071 kb on + strand, within MPMX20_01647at 1747.093 kb on - strand, within MPMX20_01647at 1747.110 kb on + strand, within MPMX20_01647at 1747.110 kb on + strand, within MPMX20_01647at 1747.110 kb on + strand, within MPMX20_01647at 1747.110 kb on + strand, within MPMX20_01647at 1747.110 kb on + strand, within MPMX20_01647at 1747.111 kb on + strand, within MPMX20_01647at 1747.119 kb on - strand, within MPMX20_01647at 1747.129 kb on + strand, within MPMX20_01647at 1747.134 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.155 kb on + strand, within MPMX20_01647at 1747.165 kb on + strand, within MPMX20_01647at 1747.165 kb on + strand, within MPMX20_01647at 1747.165 kb on + strand, within MPMX20_01647at 1747.165 kb on + strand, within MPMX20_01647at 1747.165 kb on + strand, within MPMX20_01647at 1747.165 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.170 kb on + strand, within MPMX20_01647at 1747.172 kb on + strand, within MPMX20_01647at 1747.174 kb on + strandat 1747.175 kb on + strandat 1747.175 kb on + strandat 1747.182 kb on + strandat 1747.182 kb on + strandat 1747.182 kb on + strandat 1747.182 kb on + strandat 1747.182 kb on + strandat 1747.184 kb on + strandat 1747.184 kb on + strandat 1747.184 kb on + strandat 1747.202 kb on + strandat 1747.207 kb on + strandat 1747.207 kb on + strandat 1747.207 kb on + strandat 1747.207 kb on + strandat 1747.207 kb on + strandat 1747.207 kb on + strandat 1747.207 kb on + strandat 1747.208 kb on + strandat 1747.209 kb on + strandat 1747.232 kb on + strandat 1747.232 kb on + strandat 1747.232 kb on + strandat 1747.232 kb on + strandat 1747.232 kb on + strandat 1747.253 kb on + strandat 1747.256 kb on + strandat 1747.295 kb on + strandat 1747.302 kb on + strandat 1747.302 kb on + strandat 1747.302 kb on + strandat 1747.302 kb on + strandat 1747.302 kb on + strandat 1747.308 kb on + strandat 1747.312 kb on + strandat 1747.312 kb on + strandat 1747.312 kb on + strandat 1747.331 kb on + strandat 1747.355 kb on + strandat 1747.355 kb on + strandat 1747.363 kb on + strandat 1747.363 kb on + strandat 1748.152 kb on + strand, within MPMX20_01648at 1748.161 kb on + strand, within MPMX20_01648

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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1,746,468 + MPMX20_01647 0.61 +1.0
1,746,468 + MPMX20_01647 0.61 -0.6
1,746,474 - MPMX20_01647 0.62 -1.0
1,746,535 + MPMX20_01647 0.64 +0.6
1,746,576 - MPMX20_01647 0.66 +0.1
1,746,591 + MPMX20_01647 0.66 -2.1
1,746,611 - MPMX20_01647 0.67 -0.5
1,746,615 + MPMX20_01647 0.67 -0.6
1,746,618 - MPMX20_01647 0.67 -0.2
1,746,647 + MPMX20_01647 0.69 +1.1
1,746,655 - MPMX20_01647 0.69 -0.0
1,746,655 - MPMX20_01647 0.69 -1.6
1,746,717 - MPMX20_01647 0.71 -1.9
1,746,739 - MPMX20_01647 0.72 +0.5
1,746,751 - MPMX20_01647 0.73 -2.1
1,746,788 + MPMX20_01647 0.74 +0.0
1,746,793 + MPMX20_01647 0.75 -0.9
1,746,793 + MPMX20_01647 0.75 -1.9
1,746,793 + MPMX20_01647 0.75 -0.3
1,746,793 + MPMX20_01647 0.75 -0.3
1,746,793 + MPMX20_01647 0.75 +0.4
1,746,793 + MPMX20_01647 0.75 -0.2
1,746,793 + MPMX20_01647 0.75 -0.9
1,746,793 + MPMX20_01647 0.75 -0.7
1,746,793 + MPMX20_01647 0.75 +0.2
1,746,793 + MPMX20_01647 0.75 +1.6
1,746,793 + MPMX20_01647 0.75 -1.6
1,746,796 - MPMX20_01647 0.75 +0.7
1,746,796 - MPMX20_01647 0.75 -0.3
1,746,796 - MPMX20_01647 0.75 -1.3
1,746,801 - MPMX20_01647 0.75 -1.4
1,746,801 - MPMX20_01647 0.75 -0.1
1,746,801 - MPMX20_01647 0.75 +0.6
1,746,801 - MPMX20_01647 0.75 +1.8
1,746,801 - MPMX20_01647 0.75 +2.8
1,746,801 - MPMX20_01647 0.75 -1.0
1,746,801 - MPMX20_01647 0.75 +1.0
1,746,801 - MPMX20_01647 0.75 +0.4
1,746,801 - MPMX20_01647 0.75 -0.2
1,746,801 - MPMX20_01647 0.75 -0.4
1,746,801 - MPMX20_01647 0.75 -0.6
1,746,801 - MPMX20_01647 0.75 -1.0
1,746,801 - MPMX20_01647 0.75 -0.2
1,746,849 + MPMX20_01647 0.77 -0.9
1,746,864 - MPMX20_01647 0.77 +1.4
1,746,931 + MPMX20_01647 0.80 -1.0
1,746,937 - MPMX20_01647 0.80 -1.7
1,746,937 - MPMX20_01647 0.80 -0.9
1,746,939 - MPMX20_01647 0.80 +2.8
1,746,939 - MPMX20_01647 0.80 +0.6
1,746,939 - MPMX20_01647 0.80 -1.5
1,747,013 + MPMX20_01647 0.83 -0.0
1,747,018 + MPMX20_01647 0.84 +0.4
1,747,032 - MPMX20_01647 0.84 -0.2
1,747,038 - MPMX20_01647 0.84 +2.2
1,747,042 - MPMX20_01647 0.85 +1.5
1,747,071 + MPMX20_01647 0.86 +1.2
1,747,093 - MPMX20_01647 0.87 -0.4
1,747,110 + MPMX20_01647 0.87 -0.3
1,747,110 + MPMX20_01647 0.87 -0.8
1,747,110 + MPMX20_01647 0.87 +1.0
1,747,110 + MPMX20_01647 0.87 -0.3
1,747,110 + MPMX20_01647 0.87 +2.8
1,747,111 + MPMX20_01647 0.87 +0.5
1,747,119 - MPMX20_01647 0.88 +1.2
1,747,129 + MPMX20_01647 0.88 +1.2
1,747,134 + MPMX20_01647 0.88 -0.2
1,747,155 + MPMX20_01647 0.89 -0.1
1,747,155 + MPMX20_01647 0.89 +0.2
1,747,155 + MPMX20_01647 0.89 -0.5
1,747,155 + MPMX20_01647 0.89 -0.9
1,747,155 + MPMX20_01647 0.89 +0.2
1,747,155 + MPMX20_01647 0.89 -0.5
1,747,155 + MPMX20_01647 0.89 +1.0
1,747,155 + MPMX20_01647 0.89 +3.0
1,747,155 + MPMX20_01647 0.89 +0.2
1,747,155 + MPMX20_01647 0.89 +1.2
1,747,165 + MPMX20_01647 0.90 +0.2
1,747,165 + MPMX20_01647 0.90 +0.5
1,747,165 + MPMX20_01647 0.90 +2.1
1,747,165 + MPMX20_01647 0.90 -0.3
1,747,165 + MPMX20_01647 0.90 +0.6
1,747,165 + MPMX20_01647 0.90 +0.5
1,747,170 + MPMX20_01647 0.90 +5.5
1,747,170 + MPMX20_01647 0.90 -0.3
1,747,170 + MPMX20_01647 0.90 +0.4
1,747,170 + MPMX20_01647 0.90 +0.3
1,747,170 + MPMX20_01647 0.90 +2.2
1,747,170 + MPMX20_01647 0.90 -0.8
1,747,170 + MPMX20_01647 0.90 +0.7
1,747,172 + MPMX20_01647 0.90 +0.0
1,747,174 + +0.5
1,747,175 + -0.9
1,747,175 + +1.2
1,747,182 + -1.3
1,747,182 + -1.0
1,747,182 + +1.0
1,747,182 + +1.0
1,747,182 + -0.5
1,747,184 + -1.3
1,747,184 + -1.3
1,747,184 + +0.2
1,747,202 + -0.2
1,747,207 + +1.2
1,747,207 + -0.0
1,747,207 + +0.0
1,747,207 + -1.9
1,747,207 + -0.3
1,747,207 + -0.1
1,747,207 + +0.3
1,747,208 + +1.0
1,747,209 + +1.2
1,747,232 + +0.4
1,747,232 + +0.2
1,747,232 + -2.0
1,747,232 + +0.0
1,747,232 + +1.4
1,747,253 + +0.6
1,747,256 + -0.3
1,747,295 + -1.5
1,747,302 + +1.1
1,747,302 + +0.0
1,747,302 + +2.8
1,747,302 + -0.2
1,747,302 + +0.8
1,747,308 + -0.3
1,747,312 + +0.8
1,747,312 + -0.0
1,747,312 + +0.7
1,747,331 + +0.0
1,747,355 + -1.0
1,747,355 + +0.8
1,747,363 + -0.3
1,747,363 + +2.8
1,748,152 + MPMX20_01648 0.74 -1.1
1,748,161 + MPMX20_01648 0.75 -1.7

Or see this region's nucleotide sequence