Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01647 and MPMX20_01648 are separated by 4 nucleotides MPMX20_01648 and MPMX20_01649 are separated by 466 nucleotides
MPMX20_01647: MPMX20_01647 - hypothetical protein, at 1,744,957 to 1,747,419
_01647
MPMX20_01648: MPMX20_01648 - hypothetical protein, at 1,747,424 to 1,748,404
_01648
MPMX20_01649: MPMX20_01649 - hypothetical protein, at 1,748,871 to 1,749,086
_01649
Position (kb)
1747
1748
1749 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1746.468 kb on + strand, within MPMX20_01647 at 1746.468 kb on + strand, within MPMX20_01647 at 1746.474 kb on - strand, within MPMX20_01647 at 1746.535 kb on + strand, within MPMX20_01647 at 1746.576 kb on - strand, within MPMX20_01647 at 1746.591 kb on + strand, within MPMX20_01647 at 1746.611 kb on - strand, within MPMX20_01647 at 1746.615 kb on + strand, within MPMX20_01647 at 1746.618 kb on - strand, within MPMX20_01647 at 1746.647 kb on + strand, within MPMX20_01647 at 1746.655 kb on - strand, within MPMX20_01647 at 1746.655 kb on - strand, within MPMX20_01647 at 1746.717 kb on - strand, within MPMX20_01647 at 1746.739 kb on - strand, within MPMX20_01647 at 1746.751 kb on - strand, within MPMX20_01647 at 1746.788 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.793 kb on + strand, within MPMX20_01647 at 1746.796 kb on - strand, within MPMX20_01647 at 1746.796 kb on - strand, within MPMX20_01647 at 1746.796 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.801 kb on - strand, within MPMX20_01647 at 1746.849 kb on + strand, within MPMX20_01647 at 1746.864 kb on - strand, within MPMX20_01647 at 1746.931 kb on + strand, within MPMX20_01647 at 1746.937 kb on - strand, within MPMX20_01647 at 1746.937 kb on - strand, within MPMX20_01647 at 1746.939 kb on - strand, within MPMX20_01647 at 1746.939 kb on - strand, within MPMX20_01647 at 1746.939 kb on - strand, within MPMX20_01647 at 1747.013 kb on + strand, within MPMX20_01647 at 1747.018 kb on + strand, within MPMX20_01647 at 1747.032 kb on - strand, within MPMX20_01647 at 1747.038 kb on - strand, within MPMX20_01647 at 1747.042 kb on - strand, within MPMX20_01647 at 1747.071 kb on + strand, within MPMX20_01647 at 1747.093 kb on - strand, within MPMX20_01647 at 1747.110 kb on + strand, within MPMX20_01647 at 1747.110 kb on + strand, within MPMX20_01647 at 1747.110 kb on + strand, within MPMX20_01647 at 1747.110 kb on + strand, within MPMX20_01647 at 1747.110 kb on + strand, within MPMX20_01647 at 1747.111 kb on + strand, within MPMX20_01647 at 1747.119 kb on - strand, within MPMX20_01647 at 1747.129 kb on + strand, within MPMX20_01647 at 1747.134 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.155 kb on + strand, within MPMX20_01647 at 1747.165 kb on + strand, within MPMX20_01647 at 1747.165 kb on + strand, within MPMX20_01647 at 1747.165 kb on + strand, within MPMX20_01647 at 1747.165 kb on + strand, within MPMX20_01647 at 1747.165 kb on + strand, within MPMX20_01647 at 1747.165 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.170 kb on + strand, within MPMX20_01647 at 1747.172 kb on + strand, within MPMX20_01647 at 1747.174 kb on + strand at 1747.175 kb on + strand at 1747.175 kb on + strand at 1747.182 kb on + strand at 1747.182 kb on + strand at 1747.182 kb on + strand at 1747.182 kb on + strand at 1747.182 kb on + strand at 1747.184 kb on + strand at 1747.184 kb on + strand at 1747.184 kb on + strand at 1747.202 kb on + strand at 1747.207 kb on + strand at 1747.207 kb on + strand at 1747.207 kb on + strand at 1747.207 kb on + strand at 1747.207 kb on + strand at 1747.207 kb on + strand at 1747.207 kb on + strand at 1747.208 kb on + strand at 1747.209 kb on + strand at 1747.232 kb on + strand at 1747.232 kb on + strand at 1747.232 kb on + strand at 1747.232 kb on + strand at 1747.232 kb on + strand at 1747.253 kb on + strand at 1747.256 kb on + strand at 1747.295 kb on + strand at 1747.302 kb on + strand at 1747.302 kb on + strand at 1747.302 kb on + strand at 1747.302 kb on + strand at 1747.302 kb on + strand at 1747.308 kb on + strand at 1747.312 kb on + strand at 1747.312 kb on + strand at 1747.312 kb on + strand at 1747.331 kb on + strand at 1747.355 kb on + strand at 1747.355 kb on + strand at 1747.363 kb on + strand at 1747.363 kb on + strand at 1748.152 kb on + strand, within MPMX20_01648 at 1748.161 kb on + strand, within MPMX20_01648
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031 remove 1,746,468 + MPMX20_01647 0.61 +1.0 1,746,468 + MPMX20_01647 0.61 -0.6 1,746,474 - MPMX20_01647 0.62 -1.0 1,746,535 + MPMX20_01647 0.64 +0.6 1,746,576 - MPMX20_01647 0.66 +0.1 1,746,591 + MPMX20_01647 0.66 -2.1 1,746,611 - MPMX20_01647 0.67 -0.5 1,746,615 + MPMX20_01647 0.67 -0.6 1,746,618 - MPMX20_01647 0.67 -0.2 1,746,647 + MPMX20_01647 0.69 +1.1 1,746,655 - MPMX20_01647 0.69 -0.0 1,746,655 - MPMX20_01647 0.69 -1.6 1,746,717 - MPMX20_01647 0.71 -1.9 1,746,739 - MPMX20_01647 0.72 +0.5 1,746,751 - MPMX20_01647 0.73 -2.1 1,746,788 + MPMX20_01647 0.74 +0.0 1,746,793 + MPMX20_01647 0.75 -0.9 1,746,793 + MPMX20_01647 0.75 -1.9 1,746,793 + MPMX20_01647 0.75 -0.3 1,746,793 + MPMX20_01647 0.75 -0.3 1,746,793 + MPMX20_01647 0.75 +0.4 1,746,793 + MPMX20_01647 0.75 -0.2 1,746,793 + MPMX20_01647 0.75 -0.9 1,746,793 + MPMX20_01647 0.75 -0.7 1,746,793 + MPMX20_01647 0.75 +0.2 1,746,793 + MPMX20_01647 0.75 +1.6 1,746,793 + MPMX20_01647 0.75 -1.6 1,746,796 - MPMX20_01647 0.75 +0.7 1,746,796 - MPMX20_01647 0.75 -0.3 1,746,796 - MPMX20_01647 0.75 -1.3 1,746,801 - MPMX20_01647 0.75 -1.4 1,746,801 - MPMX20_01647 0.75 -0.1 1,746,801 - MPMX20_01647 0.75 +0.6 1,746,801 - MPMX20_01647 0.75 +1.8 1,746,801 - MPMX20_01647 0.75 +2.8 1,746,801 - MPMX20_01647 0.75 -1.0 1,746,801 - MPMX20_01647 0.75 +1.0 1,746,801 - MPMX20_01647 0.75 +0.4 1,746,801 - MPMX20_01647 0.75 -0.2 1,746,801 - MPMX20_01647 0.75 -0.4 1,746,801 - MPMX20_01647 0.75 -0.6 1,746,801 - MPMX20_01647 0.75 -1.0 1,746,801 - MPMX20_01647 0.75 -0.2 1,746,849 + MPMX20_01647 0.77 -0.9 1,746,864 - MPMX20_01647 0.77 +1.4 1,746,931 + MPMX20_01647 0.80 -1.0 1,746,937 - MPMX20_01647 0.80 -1.7 1,746,937 - MPMX20_01647 0.80 -0.9 1,746,939 - MPMX20_01647 0.80 +2.8 1,746,939 - MPMX20_01647 0.80 +0.6 1,746,939 - MPMX20_01647 0.80 -1.5 1,747,013 + MPMX20_01647 0.83 -0.0 1,747,018 + MPMX20_01647 0.84 +0.4 1,747,032 - MPMX20_01647 0.84 -0.2 1,747,038 - MPMX20_01647 0.84 +2.2 1,747,042 - MPMX20_01647 0.85 +1.5 1,747,071 + MPMX20_01647 0.86 +1.2 1,747,093 - MPMX20_01647 0.87 -0.4 1,747,110 + MPMX20_01647 0.87 -0.3 1,747,110 + MPMX20_01647 0.87 -0.8 1,747,110 + MPMX20_01647 0.87 +1.0 1,747,110 + MPMX20_01647 0.87 -0.3 1,747,110 + MPMX20_01647 0.87 +2.8 1,747,111 + MPMX20_01647 0.87 +0.5 1,747,119 - MPMX20_01647 0.88 +1.2 1,747,129 + MPMX20_01647 0.88 +1.2 1,747,134 + MPMX20_01647 0.88 -0.2 1,747,155 + MPMX20_01647 0.89 -0.1 1,747,155 + MPMX20_01647 0.89 +0.2 1,747,155 + MPMX20_01647 0.89 -0.5 1,747,155 + MPMX20_01647 0.89 -0.9 1,747,155 + MPMX20_01647 0.89 +0.2 1,747,155 + MPMX20_01647 0.89 -0.5 1,747,155 + MPMX20_01647 0.89 +1.0 1,747,155 + MPMX20_01647 0.89 +3.0 1,747,155 + MPMX20_01647 0.89 +0.2 1,747,155 + MPMX20_01647 0.89 +1.2 1,747,165 + MPMX20_01647 0.90 +0.2 1,747,165 + MPMX20_01647 0.90 +0.5 1,747,165 + MPMX20_01647 0.90 +2.1 1,747,165 + MPMX20_01647 0.90 -0.3 1,747,165 + MPMX20_01647 0.90 +0.6 1,747,165 + MPMX20_01647 0.90 +0.5 1,747,170 + MPMX20_01647 0.90 +5.5 1,747,170 + MPMX20_01647 0.90 -0.3 1,747,170 + MPMX20_01647 0.90 +0.4 1,747,170 + MPMX20_01647 0.90 +0.3 1,747,170 + MPMX20_01647 0.90 +2.2 1,747,170 + MPMX20_01647 0.90 -0.8 1,747,170 + MPMX20_01647 0.90 +0.7 1,747,172 + MPMX20_01647 0.90 +0.0 1,747,174 + +0.5 1,747,175 + -0.9 1,747,175 + +1.2 1,747,182 + -1.3 1,747,182 + -1.0 1,747,182 + +1.0 1,747,182 + +1.0 1,747,182 + -0.5 1,747,184 + -1.3 1,747,184 + -1.3 1,747,184 + +0.2 1,747,202 + -0.2 1,747,207 + +1.2 1,747,207 + -0.0 1,747,207 + +0.0 1,747,207 + -1.9 1,747,207 + -0.3 1,747,207 + -0.1 1,747,207 + +0.3 1,747,208 + +1.0 1,747,209 + +1.2 1,747,232 + +0.4 1,747,232 + +0.2 1,747,232 + -2.0 1,747,232 + +0.0 1,747,232 + +1.4 1,747,253 + +0.6 1,747,256 + -0.3 1,747,295 + -1.5 1,747,302 + +1.1 1,747,302 + +0.0 1,747,302 + +2.8 1,747,302 + -0.2 1,747,302 + +0.8 1,747,308 + -0.3 1,747,312 + +0.8 1,747,312 + -0.0 1,747,312 + +0.7 1,747,331 + +0.0 1,747,355 + -1.0 1,747,355 + +0.8 1,747,363 + -0.3 1,747,363 + +2.8 1,748,152 + MPMX20_01648 0.74 -1.1 1,748,161 + MPMX20_01648 0.75 -1.7
Or see this region's nucleotide sequence