Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00273

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00272 and MPMX20_00273 are separated by 253 nucleotidesMPMX20_00273 and MPMX20_00274 are separated by 113 nucleotidesMPMX20_00274 and MPMX20_00275 are separated by 2 nucleotidesMPMX20_00275 and MPMX20_00276 are separated by 3 nucleotides MPMX20_00272: MPMX20_00272 - Aromatic-amino-acid aminotransferase, at 289,488 to 290,681 _00272 MPMX20_00273: MPMX20_00273 - Class B acid phosphatase, at 290,935 to 291,648 _00273 MPMX20_00274: MPMX20_00274 - hypothetical protein, at 291,762 to 292,178 _00274 MPMX20_00275: MPMX20_00275 - putative protein YjbR, at 292,181 to 292,534 _00275 MPMX20_00276: MPMX20_00276 - UvrABC system protein A, at 292,538 to 295,360 _00276 Position (kb) 290 291 292Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 290.005 kb on + strand, within MPMX20_00272at 290.016 kb on - strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.054 kb on - strand, within MPMX20_00272at 290.055 kb on - strand, within MPMX20_00272at 290.055 kb on - strand, within MPMX20_00272at 290.060 kb on - strand, within MPMX20_00272at 290.096 kb on - strand, within MPMX20_00272at 290.098 kb on + strand, within MPMX20_00272at 290.106 kb on - strand, within MPMX20_00272at 290.106 kb on - strand, within MPMX20_00272at 290.137 kb on + strand, within MPMX20_00272at 290.189 kb on - strand, within MPMX20_00272at 290.207 kb on + strand, within MPMX20_00272at 290.207 kb on + strand, within MPMX20_00272at 290.215 kb on - strand, within MPMX20_00272at 290.322 kb on + strand, within MPMX20_00272at 290.374 kb on + strand, within MPMX20_00272at 290.374 kb on + strand, within MPMX20_00272at 290.382 kb on - strand, within MPMX20_00272at 290.442 kb on + strand, within MPMX20_00272at 290.449 kb on - strand, within MPMX20_00272at 290.485 kb on - strand, within MPMX20_00272at 290.513 kb on + strand, within MPMX20_00272at 290.534 kb on + strand, within MPMX20_00272at 290.580 kb on + strandat 290.582 kb on + strandat 290.777 kb on + strandat 290.778 kb on + strandat 290.778 kb on + strandat 290.778 kb on + strandat 290.778 kb on + strandat 290.786 kb on - strandat 290.861 kb on + strandat 290.869 kb on - strandat 291.024 kb on + strand, within MPMX20_00273at 291.024 kb on + strand, within MPMX20_00273at 291.071 kb on - strand, within MPMX20_00273at 291.134 kb on + strand, within MPMX20_00273at 291.283 kb on - strand, within MPMX20_00273at 291.330 kb on + strand, within MPMX20_00273at 291.355 kb on - strand, within MPMX20_00273at 291.355 kb on - strand, within MPMX20_00273at 291.365 kb on - strand, within MPMX20_00273at 291.416 kb on + strand, within MPMX20_00273at 291.473 kb on + strand, within MPMX20_00273at 291.473 kb on + strand, within MPMX20_00273at 291.478 kb on + strand, within MPMX20_00273at 291.498 kb on + strand, within MPMX20_00273at 291.554 kb on + strand, within MPMX20_00273at 291.642 kb on + strandat 291.761 kb on - strandat 291.761 kb on - strandat 291.766 kb on - strandat 291.785 kb on - strandat 291.867 kb on + strand, within MPMX20_00274at 291.867 kb on + strand, within MPMX20_00274at 291.869 kb on - strand, within MPMX20_00274at 291.875 kb on - strand, within MPMX20_00274at 291.893 kb on + strand, within MPMX20_00274at 291.895 kb on + strand, within MPMX20_00274at 291.903 kb on - strand, within MPMX20_00274at 291.943 kb on - strand, within MPMX20_00274at 292.019 kb on - strand, within MPMX20_00274at 292.044 kb on + strand, within MPMX20_00274at 292.081 kb on - strand, within MPMX20_00274at 292.091 kb on + strand, within MPMX20_00274at 292.091 kb on + strand, within MPMX20_00274at 292.207 kb on - strandat 292.222 kb on - strand, within MPMX20_00275at 292.229 kb on + strand, within MPMX20_00275at 292.229 kb on + strand, within MPMX20_00275at 292.237 kb on - strand, within MPMX20_00275at 292.264 kb on + strand, within MPMX20_00275at 292.272 kb on - strand, within MPMX20_00275at 292.272 kb on - strand, within MPMX20_00275at 292.272 kb on - strand, within MPMX20_00275at 292.275 kb on + strand, within MPMX20_00275at 292.303 kb on + strand, within MPMX20_00275at 292.304 kb on + strand, within MPMX20_00275at 292.312 kb on - strand, within MPMX20_00275at 292.312 kb on - strand, within MPMX20_00275at 292.322 kb on - strand, within MPMX20_00275at 292.327 kb on + strand, within MPMX20_00275at 292.328 kb on + strand, within MPMX20_00275at 292.338 kb on + strand, within MPMX20_00275at 292.346 kb on - strand, within MPMX20_00275at 292.346 kb on - strand, within MPMX20_00275at 292.354 kb on + strand, within MPMX20_00275at 292.380 kb on - strand, within MPMX20_00275at 292.402 kb on - strand, within MPMX20_00275at 292.409 kb on + strand, within MPMX20_00275at 292.481 kb on - strand, within MPMX20_00275at 292.488 kb on + strand, within MPMX20_00275at 292.527 kb on + strandat 292.568 kb on + strandat 292.575 kb on + strandat 292.576 kb on - strandat 292.583 kb on - strandat 292.592 kb on + strandat 292.647 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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290,005 + MPMX20_00272 0.43 -0.2
290,016 - MPMX20_00272 0.44 +0.5
290,032 + MPMX20_00272 0.46 +0.5
290,032 + MPMX20_00272 0.46 -0.8
290,032 + MPMX20_00272 0.46 +1.4
290,040 - MPMX20_00272 0.46 -0.5
290,040 - MPMX20_00272 0.46 +0.2
290,040 - MPMX20_00272 0.46 -0.7
290,040 - MPMX20_00272 0.46 -0.0
290,040 - MPMX20_00272 0.46 +7.0
290,047 + MPMX20_00272 0.47 -1.0
290,047 + MPMX20_00272 0.47 -1.3
290,047 + MPMX20_00272 0.47 -1.5
290,047 + MPMX20_00272 0.47 -0.0
290,047 + MPMX20_00272 0.47 -1.0
290,054 - MPMX20_00272 0.47 +1.0
290,055 - MPMX20_00272 0.47 -0.5
290,055 - MPMX20_00272 0.47 +0.0
290,060 - MPMX20_00272 0.48 +0.0
290,096 - MPMX20_00272 0.51 +0.6
290,098 + MPMX20_00272 0.51 +0.9
290,106 - MPMX20_00272 0.52 +0.1
290,106 - MPMX20_00272 0.52 +1.6
290,137 + MPMX20_00272 0.54 -1.6
290,189 - MPMX20_00272 0.59 +1.6
290,207 + MPMX20_00272 0.60 -0.4
290,207 + MPMX20_00272 0.60 +0.4
290,215 - MPMX20_00272 0.61 -0.0
290,322 + MPMX20_00272 0.70 -1.2
290,374 + MPMX20_00272 0.74 -0.1
290,374 + MPMX20_00272 0.74 -1.1
290,382 - MPMX20_00272 0.75 -2.0
290,442 + MPMX20_00272 0.80 +2.6
290,449 - MPMX20_00272 0.80 -0.4
290,485 - MPMX20_00272 0.84 +0.7
290,513 + MPMX20_00272 0.86 +0.0
290,534 + MPMX20_00272 0.88 -1.0
290,580 + -1.2
290,582 + +0.4
290,777 + -1.4
290,778 + +0.2
290,778 + -0.7
290,778 + +0.1
290,778 + +0.3
290,786 - +2.6
290,861 + -0.0
290,869 - -1.4
291,024 + MPMX20_00273 0.12 -1.4
291,024 + MPMX20_00273 0.12 -0.1
291,071 - MPMX20_00273 0.19 +0.6
291,134 + MPMX20_00273 0.28 -1.1
291,283 - MPMX20_00273 0.49 -0.8
291,330 + MPMX20_00273 0.55 -0.8
291,355 - MPMX20_00273 0.59 -0.3
291,355 - MPMX20_00273 0.59 +0.4
291,365 - MPMX20_00273 0.60 +0.6
291,416 + MPMX20_00273 0.67 +1.2
291,473 + MPMX20_00273 0.75 -1.4
291,473 + MPMX20_00273 0.75 +0.1
291,478 + MPMX20_00273 0.76 +4.8
291,498 + MPMX20_00273 0.79 -0.7
291,554 + MPMX20_00273 0.87 +1.1
291,642 + +2.6
291,761 - -0.3
291,761 - -0.7
291,766 - -0.5
291,785 - -1.5
291,867 + MPMX20_00274 0.25 +0.6
291,867 + MPMX20_00274 0.25 -0.4
291,869 - MPMX20_00274 0.26 -2.1
291,875 - MPMX20_00274 0.27 -0.6
291,893 + MPMX20_00274 0.31 +1.6
291,895 + MPMX20_00274 0.32 +0.6
291,903 - MPMX20_00274 0.34 +1.6
291,943 - MPMX20_00274 0.43 -0.1
292,019 - MPMX20_00274 0.62 -1.0
292,044 + MPMX20_00274 0.68 -1.0
292,081 - MPMX20_00274 0.76 +0.1
292,091 + MPMX20_00274 0.79 -0.8
292,091 + MPMX20_00274 0.79 +1.0
292,207 - -0.9
292,222 - MPMX20_00275 0.12 +0.3
292,229 + MPMX20_00275 0.14 -1.0
292,229 + MPMX20_00275 0.14 -0.3
292,237 - MPMX20_00275 0.16 -0.4
292,264 + MPMX20_00275 0.23 -1.0
292,272 - MPMX20_00275 0.26 +3.6
292,272 - MPMX20_00275 0.26 +0.8
292,272 - MPMX20_00275 0.26 +0.2
292,275 + MPMX20_00275 0.27 -1.4
292,303 + MPMX20_00275 0.34 -0.8
292,304 + MPMX20_00275 0.35 -0.3
292,312 - MPMX20_00275 0.37 +1.6
292,312 - MPMX20_00275 0.37 +2.6
292,322 - MPMX20_00275 0.40 -1.5
292,327 + MPMX20_00275 0.41 -0.3
292,328 + MPMX20_00275 0.42 -0.7
292,338 + MPMX20_00275 0.44 -0.9
292,346 - MPMX20_00275 0.47 +0.8
292,346 - MPMX20_00275 0.47 -0.0
292,354 + MPMX20_00275 0.49 +0.6
292,380 - MPMX20_00275 0.56 -0.7
292,402 - MPMX20_00275 0.62 -0.8
292,409 + MPMX20_00275 0.64 -0.3
292,481 - MPMX20_00275 0.85 -0.3
292,488 + MPMX20_00275 0.87 -1.1
292,527 + +1.6
292,568 + -0.0
292,575 + +0.3
292,576 - -1.1
292,583 - -0.8
292,592 + -0.4
292,647 - -2.1

Or see this region's nucleotide sequence