Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00272

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00271 and MPMX20_00272 are separated by 75 nucleotidesMPMX20_00272 and MPMX20_00273 are separated by 253 nucleotides MPMX20_00271: MPMX20_00271 - Trifunctional NAD biosynthesis/regulator protein NadR, at 288,402 to 289,412 _00271 MPMX20_00272: MPMX20_00272 - Aromatic-amino-acid aminotransferase, at 289,488 to 290,681 _00272 MPMX20_00273: MPMX20_00273 - Class B acid phosphatase, at 290,935 to 291,648 _00273 Position (kb) 289 290 291Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 288.493 kb on - strandat 288.508 kb on - strand, within MPMX20_00271at 288.555 kb on + strand, within MPMX20_00271at 288.565 kb on + strand, within MPMX20_00271at 288.573 kb on - strand, within MPMX20_00271at 288.589 kb on + strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.713 kb on + strand, within MPMX20_00271at 288.752 kb on - strand, within MPMX20_00271at 288.841 kb on + strand, within MPMX20_00271at 288.855 kb on - strand, within MPMX20_00271at 288.897 kb on - strand, within MPMX20_00271at 288.904 kb on - strand, within MPMX20_00271at 289.029 kb on + strand, within MPMX20_00271at 289.049 kb on - strand, within MPMX20_00271at 289.059 kb on + strand, within MPMX20_00271at 289.095 kb on + strand, within MPMX20_00271at 289.108 kb on - strand, within MPMX20_00271at 289.114 kb on + strand, within MPMX20_00271at 289.131 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.197 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.269 kb on + strand, within MPMX20_00271at 289.271 kb on + strand, within MPMX20_00271at 289.305 kb on + strand, within MPMX20_00271at 289.313 kb on - strandat 289.313 kb on - strandat 289.531 kb on + strandat 289.537 kb on - strandat 289.592 kb on + strandat 289.622 kb on + strand, within MPMX20_00272at 289.660 kb on - strand, within MPMX20_00272at 289.682 kb on - strand, within MPMX20_00272at 289.698 kb on + strand, within MPMX20_00272at 289.699 kb on + strand, within MPMX20_00272at 289.706 kb on - strand, within MPMX20_00272at 289.706 kb on - strand, within MPMX20_00272at 289.730 kb on + strand, within MPMX20_00272at 289.797 kb on + strand, within MPMX20_00272at 289.815 kb on - strand, within MPMX20_00272at 289.815 kb on - strand, within MPMX20_00272at 289.869 kb on + strand, within MPMX20_00272at 289.869 kb on + strand, within MPMX20_00272at 289.912 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.928 kb on - strand, within MPMX20_00272at 289.928 kb on - strand, within MPMX20_00272at 289.928 kb on - strand, within MPMX20_00272at 290.005 kb on + strand, within MPMX20_00272at 290.016 kb on - strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.054 kb on - strand, within MPMX20_00272at 290.055 kb on - strand, within MPMX20_00272at 290.055 kb on - strand, within MPMX20_00272at 290.060 kb on - strand, within MPMX20_00272at 290.096 kb on - strand, within MPMX20_00272at 290.098 kb on + strand, within MPMX20_00272at 290.106 kb on - strand, within MPMX20_00272at 290.106 kb on - strand, within MPMX20_00272at 290.137 kb on + strand, within MPMX20_00272at 290.189 kb on - strand, within MPMX20_00272at 290.207 kb on + strand, within MPMX20_00272at 290.207 kb on + strand, within MPMX20_00272at 290.215 kb on - strand, within MPMX20_00272at 290.322 kb on + strand, within MPMX20_00272at 290.374 kb on + strand, within MPMX20_00272at 290.374 kb on + strand, within MPMX20_00272at 290.382 kb on - strand, within MPMX20_00272at 290.442 kb on + strand, within MPMX20_00272at 290.449 kb on - strand, within MPMX20_00272at 290.485 kb on - strand, within MPMX20_00272at 290.513 kb on + strand, within MPMX20_00272at 290.534 kb on + strand, within MPMX20_00272at 290.580 kb on + strandat 290.582 kb on + strandat 290.777 kb on + strandat 290.778 kb on + strandat 290.778 kb on + strandat 290.778 kb on + strandat 290.778 kb on + strandat 290.786 kb on - strandat 290.861 kb on + strandat 290.869 kb on - strandat 291.024 kb on + strand, within MPMX20_00273at 291.024 kb on + strand, within MPMX20_00273at 291.071 kb on - strand, within MPMX20_00273at 291.134 kb on + strand, within MPMX20_00273at 291.283 kb on - strand, within MPMX20_00273at 291.330 kb on + strand, within MPMX20_00273at 291.355 kb on - strand, within MPMX20_00273at 291.355 kb on - strand, within MPMX20_00273at 291.365 kb on - strand, within MPMX20_00273at 291.416 kb on + strand, within MPMX20_00273at 291.473 kb on + strand, within MPMX20_00273at 291.473 kb on + strand, within MPMX20_00273at 291.478 kb on + strand, within MPMX20_00273at 291.498 kb on + strand, within MPMX20_00273at 291.554 kb on + strand, within MPMX20_00273at 291.642 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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288,493 - -1.0
288,508 - MPMX20_00271 0.10 -0.6
288,555 + MPMX20_00271 0.15 -0.6
288,565 + MPMX20_00271 0.16 +1.0
288,573 - MPMX20_00271 0.17 +0.0
288,589 + MPMX20_00271 0.18 -1.9
288,597 - MPMX20_00271 0.19 -1.4
288,597 - MPMX20_00271 0.19 -0.8
288,607 + MPMX20_00271 0.20 -0.5
288,607 + MPMX20_00271 0.20 -0.9
288,615 - MPMX20_00271 0.21 +1.0
288,615 - MPMX20_00271 0.21 -0.8
288,685 + MPMX20_00271 0.28 -0.1
288,685 + MPMX20_00271 0.28 +2.1
288,693 - MPMX20_00271 0.29 +1.1
288,693 - MPMX20_00271 0.29 -1.1
288,713 + MPMX20_00271 0.31 -0.4
288,752 - MPMX20_00271 0.35 -0.0
288,841 + MPMX20_00271 0.43 -0.3
288,855 - MPMX20_00271 0.45 +1.8
288,897 - MPMX20_00271 0.49 +0.2
288,904 - MPMX20_00271 0.50 -0.0
289,029 + MPMX20_00271 0.62 -3.3
289,049 - MPMX20_00271 0.64 +0.3
289,059 + MPMX20_00271 0.65 -0.8
289,095 + MPMX20_00271 0.69 +0.2
289,108 - MPMX20_00271 0.70 -0.4
289,114 + MPMX20_00271 0.70 -0.4
289,131 + MPMX20_00271 0.72 -0.1
289,137 + MPMX20_00271 0.73 -1.4
289,137 + MPMX20_00271 0.73 -1.1
289,197 + MPMX20_00271 0.79 -1.1
289,259 + MPMX20_00271 0.85 +0.5
289,259 + MPMX20_00271 0.85 -0.3
289,269 + MPMX20_00271 0.86 -2.4
289,271 + MPMX20_00271 0.86 +0.6
289,305 + MPMX20_00271 0.89 -0.9
289,313 - -0.6
289,313 - -1.4
289,531 + -0.9
289,537 - +2.0
289,592 + -0.8
289,622 + MPMX20_00272 0.11 -0.3
289,660 - MPMX20_00272 0.14 -0.0
289,682 - MPMX20_00272 0.16 +1.0
289,698 + MPMX20_00272 0.18 +1.0
289,699 + MPMX20_00272 0.18 +0.6
289,706 - MPMX20_00272 0.18 -0.0
289,706 - MPMX20_00272 0.18 -0.7
289,730 + MPMX20_00272 0.20 -1.0
289,797 + MPMX20_00272 0.26 -1.2
289,815 - MPMX20_00272 0.27 +1.0
289,815 - MPMX20_00272 0.27 +2.6
289,869 + MPMX20_00272 0.32 -1.3
289,869 + MPMX20_00272 0.32 -0.5
289,912 + MPMX20_00272 0.36 -1.3
289,920 + MPMX20_00272 0.36 +1.6
289,920 + MPMX20_00272 0.36 +0.1
289,920 + MPMX20_00272 0.36 -0.0
289,920 + MPMX20_00272 0.36 -0.9
289,928 - MPMX20_00272 0.37 +0.6
289,928 - MPMX20_00272 0.37 -0.1
289,928 - MPMX20_00272 0.37 +0.2
290,005 + MPMX20_00272 0.43 -0.2
290,016 - MPMX20_00272 0.44 +0.5
290,032 + MPMX20_00272 0.46 +0.5
290,032 + MPMX20_00272 0.46 -0.8
290,032 + MPMX20_00272 0.46 +1.4
290,040 - MPMX20_00272 0.46 -0.5
290,040 - MPMX20_00272 0.46 +0.2
290,040 - MPMX20_00272 0.46 -0.7
290,040 - MPMX20_00272 0.46 -0.0
290,040 - MPMX20_00272 0.46 +7.0
290,047 + MPMX20_00272 0.47 -1.0
290,047 + MPMX20_00272 0.47 -1.3
290,047 + MPMX20_00272 0.47 -1.5
290,047 + MPMX20_00272 0.47 -0.0
290,047 + MPMX20_00272 0.47 -1.0
290,054 - MPMX20_00272 0.47 +1.0
290,055 - MPMX20_00272 0.47 -0.5
290,055 - MPMX20_00272 0.47 +0.0
290,060 - MPMX20_00272 0.48 +0.0
290,096 - MPMX20_00272 0.51 +0.6
290,098 + MPMX20_00272 0.51 +0.9
290,106 - MPMX20_00272 0.52 +0.1
290,106 - MPMX20_00272 0.52 +1.6
290,137 + MPMX20_00272 0.54 -1.6
290,189 - MPMX20_00272 0.59 +1.6
290,207 + MPMX20_00272 0.60 -0.4
290,207 + MPMX20_00272 0.60 +0.4
290,215 - MPMX20_00272 0.61 -0.0
290,322 + MPMX20_00272 0.70 -1.2
290,374 + MPMX20_00272 0.74 -0.1
290,374 + MPMX20_00272 0.74 -1.1
290,382 - MPMX20_00272 0.75 -2.0
290,442 + MPMX20_00272 0.80 +2.6
290,449 - MPMX20_00272 0.80 -0.4
290,485 - MPMX20_00272 0.84 +0.7
290,513 + MPMX20_00272 0.86 +0.0
290,534 + MPMX20_00272 0.88 -1.0
290,580 + -1.2
290,582 + +0.4
290,777 + -1.4
290,778 + +0.2
290,778 + -0.7
290,778 + +0.1
290,778 + +0.3
290,786 - +2.6
290,861 + -0.0
290,869 - -1.4
291,024 + MPMX20_00273 0.12 -1.4
291,024 + MPMX20_00273 0.12 -0.1
291,071 - MPMX20_00273 0.19 +0.6
291,134 + MPMX20_00273 0.28 -1.1
291,283 - MPMX20_00273 0.49 -0.8
291,330 + MPMX20_00273 0.55 -0.8
291,355 - MPMX20_00273 0.59 -0.3
291,355 - MPMX20_00273 0.59 +0.4
291,365 - MPMX20_00273 0.60 +0.6
291,416 + MPMX20_00273 0.67 +1.2
291,473 + MPMX20_00273 0.75 -1.4
291,473 + MPMX20_00273 0.75 +0.1
291,478 + MPMX20_00273 0.76 +4.8
291,498 + MPMX20_00273 0.79 -0.7
291,554 + MPMX20_00273 0.87 +1.1
291,642 + +2.6

Or see this region's nucleotide sequence