Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00132

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00131 and MPMX20_00132 are separated by 285 nucleotidesMPMX20_00132 and MPMX20_00133 are separated by 58 nucleotidesMPMX20_00133 and MPMX20_00134 overlap by 4 nucleotides MPMX20_00131: MPMX20_00131 - L-lactate permease, at 131,783 to 133,438 _00131 MPMX20_00132: MPMX20_00132 - putative protein YibL, at 133,724 to 134,086 _00132 MPMX20_00133: MPMX20_00133 - Mannitol operon repressor, at 134,145 to 134,735 _00133 MPMX20_00134: MPMX20_00134 - Mannitol-1-phosphate 5-dehydrogenase, at 134,732 to 135,880 _00134 Position (kb) 133 134 135Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 132.727 kb on + strand, within MPMX20_00131at 132.783 kb on - strand, within MPMX20_00131at 132.810 kb on + strand, within MPMX20_00131at 132.818 kb on - strand, within MPMX20_00131at 132.818 kb on - strand, within MPMX20_00131at 132.818 kb on - strand, within MPMX20_00131at 132.876 kb on - strand, within MPMX20_00131at 132.876 kb on - strand, within MPMX20_00131at 132.878 kb on + strand, within MPMX20_00131at 132.878 kb on + strand, within MPMX20_00131at 132.878 kb on + strand, within MPMX20_00131at 132.886 kb on - strand, within MPMX20_00131at 132.886 kb on - strand, within MPMX20_00131at 132.886 kb on - strand, within MPMX20_00131at 132.955 kb on - strand, within MPMX20_00131at 132.964 kb on + strand, within MPMX20_00131at 132.964 kb on + strand, within MPMX20_00131at 133.022 kb on - strand, within MPMX20_00131at 133.060 kb on + strand, within MPMX20_00131at 133.204 kb on + strand, within MPMX20_00131at 133.224 kb on + strand, within MPMX20_00131at 133.233 kb on + strand, within MPMX20_00131at 133.241 kb on - strand, within MPMX20_00131at 133.251 kb on - strand, within MPMX20_00131at 133.337 kb on - strandat 133.343 kb on - strandat 133.343 kb on - strandat 133.343 kb on - strandat 133.343 kb on - strandat 133.405 kb on - strandat 133.432 kb on + strandat 133.460 kb on - strandat 133.491 kb on - strandat 133.637 kb on + strandat 133.678 kb on - strandat 133.791 kb on + strand, within MPMX20_00132at 133.870 kb on + strand, within MPMX20_00132at 133.918 kb on - strand, within MPMX20_00132at 134.030 kb on + strand, within MPMX20_00132at 134.043 kb on - strand, within MPMX20_00132at 134.123 kb on + strandat 134.123 kb on + strandat 134.123 kb on + strandat 134.131 kb on - strandat 134.131 kb on - strandat 134.131 kb on - strandat 134.135 kb on - strandat 134.256 kb on - strand, within MPMX20_00133at 134.260 kb on + strand, within MPMX20_00133at 134.260 kb on + strand, within MPMX20_00133at 134.284 kb on + strand, within MPMX20_00133at 134.307 kb on + strand, within MPMX20_00133at 134.315 kb on - strand, within MPMX20_00133at 134.331 kb on + strand, within MPMX20_00133at 134.344 kb on + strand, within MPMX20_00133at 134.349 kb on + strand, within MPMX20_00133at 134.350 kb on - strand, within MPMX20_00133at 134.370 kb on + strand, within MPMX20_00133at 134.370 kb on + strand, within MPMX20_00133at 134.389 kb on + strand, within MPMX20_00133at 134.389 kb on + strand, within MPMX20_00133at 134.397 kb on - strand, within MPMX20_00133at 134.432 kb on + strand, within MPMX20_00133at 134.484 kb on + strand, within MPMX20_00133at 134.529 kb on - strand, within MPMX20_00133at 134.549 kb on - strand, within MPMX20_00133at 134.566 kb on + strand, within MPMX20_00133at 134.702 kb on + strandat 134.712 kb on + strandat 134.712 kb on + strandat 134.715 kb on - strandat 134.715 kb on - strandat 134.717 kb on + strandat 134.720 kb on - strandat 134.720 kb on - strandat 134.720 kb on - strandat 134.786 kb on + strandat 134.791 kb on + strandat 134.856 kb on - strand, within MPMX20_00134at 134.909 kb on - strand, within MPMX20_00134at 134.925 kb on + strand, within MPMX20_00134at 134.928 kb on + strand, within MPMX20_00134

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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132,727 + MPMX20_00131 0.57 +1.4
132,783 - MPMX20_00131 0.60 -0.1
132,810 + MPMX20_00131 0.62 +0.4
132,818 - MPMX20_00131 0.62 -0.6
132,818 - MPMX20_00131 0.62 -1.2
132,818 - MPMX20_00131 0.62 -0.9
132,876 - MPMX20_00131 0.66 -0.5
132,876 - MPMX20_00131 0.66 -0.8
132,878 + MPMX20_00131 0.66 +1.6
132,878 + MPMX20_00131 0.66 +1.6
132,878 + MPMX20_00131 0.66 -1.4
132,886 - MPMX20_00131 0.67 -1.4
132,886 - MPMX20_00131 0.67 -2.0
132,886 - MPMX20_00131 0.67 -1.1
132,955 - MPMX20_00131 0.71 -1.5
132,964 + MPMX20_00131 0.71 -0.4
132,964 + MPMX20_00131 0.71 +0.3
133,022 - MPMX20_00131 0.75 +0.4
133,060 + MPMX20_00131 0.77 -0.2
133,204 + MPMX20_00131 0.86 -1.4
133,224 + MPMX20_00131 0.87 -1.4
133,233 + MPMX20_00131 0.88 -1.2
133,241 - MPMX20_00131 0.88 -0.3
133,251 - MPMX20_00131 0.89 +0.7
133,337 - -1.9
133,343 - +0.6
133,343 - -1.3
133,343 - +0.8
133,343 - -0.6
133,405 - +0.3
133,432 + +1.0
133,460 - +0.3
133,491 - +1.0
133,637 + +1.0
133,678 - +1.4
133,791 + MPMX20_00132 0.18 -1.7
133,870 + MPMX20_00132 0.40 -1.6
133,918 - MPMX20_00132 0.53 -1.1
134,030 + MPMX20_00132 0.84 -0.2
134,043 - MPMX20_00132 0.88 -0.1
134,123 + +5.1
134,123 + -0.6
134,123 + -0.1
134,131 - -0.9
134,131 - -0.2
134,131 - +2.6
134,135 - -0.5
134,256 - MPMX20_00133 0.19 +2.6
134,260 + MPMX20_00133 0.19 +0.3
134,260 + MPMX20_00133 0.19 -0.5
134,284 + MPMX20_00133 0.24 -1.1
134,307 + MPMX20_00133 0.27 +1.0
134,315 - MPMX20_00133 0.29 +2.6
134,331 + MPMX20_00133 0.31 +1.3
134,344 + MPMX20_00133 0.34 +1.0
134,349 + MPMX20_00133 0.35 +0.6
134,350 - MPMX20_00133 0.35 +0.2
134,370 + MPMX20_00133 0.38 +1.1
134,370 + MPMX20_00133 0.38 +0.6
134,389 + MPMX20_00133 0.41 +0.3
134,389 + MPMX20_00133 0.41 -1.8
134,397 - MPMX20_00133 0.43 +0.0
134,432 + MPMX20_00133 0.49 +1.3
134,484 + MPMX20_00133 0.57 +1.0
134,529 - MPMX20_00133 0.65 +1.0
134,549 - MPMX20_00133 0.68 -0.6
134,566 + MPMX20_00133 0.71 -0.6
134,702 + +0.5
134,712 + +0.6
134,712 + +0.3
134,715 - +0.6
134,715 - -0.7
134,717 + +3.6
134,720 - -0.2
134,720 - -2.0
134,720 - -1.6
134,786 + -1.1
134,791 + +1.1
134,856 - MPMX20_00134 0.11 +2.8
134,909 - MPMX20_00134 0.15 -1.1
134,925 + MPMX20_00134 0.17 -0.2
134,928 + MPMX20_00134 0.17 -0.2

Or see this region's nucleotide sequence