Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00014

Experiment: M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00013 and MPMX20_00014 are separated by 10 nucleotidesMPMX20_00014 and MPMX20_00015 are separated by 317 nucleotidesMPMX20_00015 and MPMX20_00016 are separated by 136 nucleotides MPMX20_00013: MPMX20_00013 - hypothetical protein, at 14,205 to 15,434 _00013 MPMX20_00014: MPMX20_00014 - hypothetical protein, at 15,445 to 15,759 _00014 MPMX20_00015: MPMX20_00015 - Small heat shock protein IbpA, at 16,077 to 16,487 _00015 MPMX20_00016: MPMX20_00016 - Small heat shock protein IbpB, at 16,624 to 17,052 _00016 Position (kb) 15 16Strain fitness (log2 ratio) -2 -1 0 1 2 3at 14.502 kb on + strand, within MPMX20_00013at 14.503 kb on - strand, within MPMX20_00013at 14.510 kb on - strand, within MPMX20_00013at 14.510 kb on - strand, within MPMX20_00013at 14.510 kb on - strand, within MPMX20_00013at 14.522 kb on - strand, within MPMX20_00013at 14.527 kb on + strand, within MPMX20_00013at 14.535 kb on - strand, within MPMX20_00013at 14.560 kb on - strand, within MPMX20_00013at 14.560 kb on - strand, within MPMX20_00013at 14.623 kb on + strand, within MPMX20_00013at 14.646 kb on - strand, within MPMX20_00013at 14.722 kb on + strand, within MPMX20_00013at 14.750 kb on + strand, within MPMX20_00013at 14.782 kb on - strand, within MPMX20_00013at 14.838 kb on + strand, within MPMX20_00013at 14.926 kb on - strand, within MPMX20_00013at 14.971 kb on - strand, within MPMX20_00013at 14.981 kb on - strand, within MPMX20_00013at 15.022 kb on + strand, within MPMX20_00013at 15.051 kb on - strand, within MPMX20_00013at 15.053 kb on + strand, within MPMX20_00013at 15.086 kb on + strand, within MPMX20_00013at 15.123 kb on + strand, within MPMX20_00013at 15.140 kb on + strand, within MPMX20_00013at 15.140 kb on + strand, within MPMX20_00013at 15.145 kb on + strand, within MPMX20_00013at 15.148 kb on - strand, within MPMX20_00013at 15.162 kb on - strand, within MPMX20_00013at 15.208 kb on - strand, within MPMX20_00013at 15.218 kb on - strand, within MPMX20_00013at 15.428 kb on + strandat 15.428 kb on + strandat 15.428 kb on + strandat 15.436 kb on - strandat 15.450 kb on - strandat 15.515 kb on + strand, within MPMX20_00014at 15.559 kb on + strand, within MPMX20_00014at 15.566 kb on + strand, within MPMX20_00014at 15.566 kb on + strand, within MPMX20_00014at 15.574 kb on - strand, within MPMX20_00014at 15.580 kb on + strand, within MPMX20_00014at 15.657 kb on + strand, within MPMX20_00014at 15.693 kb on + strand, within MPMX20_00014at 15.730 kb on - strandat 15.787 kb on + strandat 15.787 kb on + strandat 15.795 kb on - strandat 15.795 kb on - strandat 15.795 kb on - strandat 15.795 kb on - strandat 15.805 kb on + strandat 15.805 kb on + strandat 15.805 kb on + strandat 15.805 kb on + strandat 15.805 kb on + strandat 15.813 kb on - strandat 15.813 kb on - strandat 15.813 kb on - strandat 15.844 kb on + strandat 15.844 kb on + strandat 15.852 kb on - strandat 15.955 kb on + strandat 15.997 kb on + strandat 16.003 kb on - strandat 16.005 kb on - strandat 16.007 kb on + strandat 16.015 kb on - strandat 16.017 kb on + strandat 16.022 kb on + strandat 16.022 kb on + strandat 16.067 kb on + strandat 16.067 kb on + strandat 16.141 kb on - strand, within MPMX20_00015at 16.169 kb on + strand, within MPMX20_00015at 16.177 kb on - strand, within MPMX20_00015at 16.179 kb on + strand, within MPMX20_00015at 16.184 kb on - strand, within MPMX20_00015at 16.184 kb on - strand, within MPMX20_00015at 16.184 kb on - strand, within MPMX20_00015at 16.186 kb on + strand, within MPMX20_00015at 16.194 kb on - strand, within MPMX20_00015at 16.216 kb on - strand, within MPMX20_00015at 16.286 kb on + strand, within MPMX20_00015at 16.294 kb on - strand, within MPMX20_00015at 16.298 kb on + strand, within MPMX20_00015at 16.337 kb on + strand, within MPMX20_00015at 16.347 kb on - strand, within MPMX20_00015at 16.385 kb on - strand, within MPMX20_00015at 16.407 kb on - strand, within MPMX20_00015at 16.407 kb on - strand, within MPMX20_00015at 16.417 kb on + strand, within MPMX20_00015at 16.525 kb on - strandat 16.538 kb on + strandat 16.581 kb on + strandat 16.624 kb on - strandat 16.636 kb on + strandat 16.688 kb on - strand, within MPMX20_00016at 16.715 kb on + strand, within MPMX20_00016at 16.723 kb on - strand, within MPMX20_00016at 16.725 kb on + strand, within MPMX20_00016

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031
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14,502 + MPMX20_00013 0.24 +1.6
14,503 - MPMX20_00013 0.24 +1.6
14,510 - MPMX20_00013 0.25 -2.3
14,510 - MPMX20_00013 0.25 -1.0
14,510 - MPMX20_00013 0.25 -1.4
14,522 - MPMX20_00013 0.26 +0.2
14,527 + MPMX20_00013 0.26 -1.3
14,535 - MPMX20_00013 0.27 +0.9
14,560 - MPMX20_00013 0.29 +0.0
14,560 - MPMX20_00013 0.29 -0.6
14,623 + MPMX20_00013 0.34 -1.9
14,646 - MPMX20_00013 0.36 -2.2
14,722 + MPMX20_00013 0.42 -1.1
14,750 + MPMX20_00013 0.44 -0.7
14,782 - MPMX20_00013 0.47 -0.7
14,838 + MPMX20_00013 0.51 +2.0
14,926 - MPMX20_00013 0.59 +2.6
14,971 - MPMX20_00013 0.62 -1.1
14,981 - MPMX20_00013 0.63 -1.3
15,022 + MPMX20_00013 0.66 -0.5
15,051 - MPMX20_00013 0.69 +0.0
15,053 + MPMX20_00013 0.69 -1.2
15,086 + MPMX20_00013 0.72 +2.6
15,123 + MPMX20_00013 0.75 -0.4
15,140 + MPMX20_00013 0.76 +0.6
15,140 + MPMX20_00013 0.76 -0.3
15,145 + MPMX20_00013 0.76 -1.2
15,148 - MPMX20_00013 0.77 +1.3
15,162 - MPMX20_00013 0.78 +0.8
15,208 - MPMX20_00013 0.82 -0.9
15,218 - MPMX20_00013 0.82 -1.4
15,428 + -1.5
15,428 + -0.4
15,428 + -0.2
15,436 - -0.7
15,450 - -1.6
15,515 + MPMX20_00014 0.22 +1.6
15,559 + MPMX20_00014 0.36 -0.9
15,566 + MPMX20_00014 0.38 -0.5
15,566 + MPMX20_00014 0.38 -0.9
15,574 - MPMX20_00014 0.41 -1.1
15,580 + MPMX20_00014 0.43 -1.0
15,657 + MPMX20_00014 0.67 -1.2
15,693 + MPMX20_00014 0.79 -1.2
15,730 - +0.2
15,787 + -1.3
15,787 + +2.6
15,795 - -1.6
15,795 - +0.4
15,795 - +0.0
15,795 - -0.5
15,805 + +0.6
15,805 + -0.4
15,805 + -0.9
15,805 + +0.0
15,805 + -0.9
15,813 - +1.6
15,813 - +0.1
15,813 - -0.4
15,844 + -0.5
15,844 + +0.5
15,852 - -1.2
15,955 + -1.4
15,997 + +0.0
16,003 - +0.3
16,005 - -1.7
16,007 + -1.2
16,015 - -0.6
16,017 + -0.2
16,022 + +0.7
16,022 + +0.6
16,067 + +2.6
16,067 + -0.4
16,141 - MPMX20_00015 0.16 -0.3
16,169 + MPMX20_00015 0.22 -0.3
16,177 - MPMX20_00015 0.24 -0.6
16,179 + MPMX20_00015 0.25 -0.7
16,184 - MPMX20_00015 0.26 -1.5
16,184 - MPMX20_00015 0.26 +1.6
16,184 - MPMX20_00015 0.26 -0.5
16,186 + MPMX20_00015 0.27 -1.2
16,194 - MPMX20_00015 0.28 -1.4
16,216 - MPMX20_00015 0.34 +0.4
16,286 + MPMX20_00015 0.51 -0.4
16,294 - MPMX20_00015 0.53 +1.0
16,298 + MPMX20_00015 0.54 +0.1
16,337 + MPMX20_00015 0.63 -1.7
16,347 - MPMX20_00015 0.66 -1.0
16,385 - MPMX20_00015 0.75 -1.1
16,407 - MPMX20_00015 0.80 +3.4
16,407 - MPMX20_00015 0.80 +0.6
16,417 + MPMX20_00015 0.83 +2.6
16,525 - -1.1
16,538 + -0.2
16,581 + +1.6
16,624 - +0.0
16,636 + +1.6
16,688 - MPMX20_00016 0.15 -0.2
16,715 + MPMX20_00016 0.21 -0.5
16,723 - MPMX20_00016 0.23 -2.0
16,725 + MPMX20_00016 0.24 +1.6

Or see this region's nucleotide sequence